FFCP PHASE1:Hg19::chr21:47406935..47406993,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:47406935..47406993,- | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_at_chr21:47406935..47406993,- | |description=CAGE_peak_at_chr21:47406935..47406993,- | ||
|id=chr21:47406935..47406993,- | |id=chr21:47406935..47406993,- | ||
|ontology_enrichment_celltype=CL:0000055!1.02e-46!180;CL:0000057!1.45e-23!75;CL:0000680!2.11e-19!57;CL:0000056!2.11e-19!57;CL:0000355!2.11e-19!57;CL:0000393!2.48e-19!60;CL:0000211!2.48e-19!60;CL:0000183!1.36e-18!59;CL:0000187!1.49e-18!54;CL:0000192!3.96e-15!42;CL:0000514!3.96e-15!42;CL:0000359!6.99e-11!32;CL:0002620!2.43e-10!23;CL:0000222!1.59e-09!119;CL:0000048!1.75e-09!430;CL:0000723!6.37e-09!436;CL:0000034!8.42e-09!444;CL:0002371!2.95e-08!591;CL:0000144!3.32e-08!625;CL:0002334!3.48e-07!12;CL:0002570!9.42e-07!8 | |ontology_enrichment_celltype=CL:0000055!1.02e-46!180;CL:0000057!1.45e-23!75;CL:0000680!2.11e-19!57;CL:0000056!2.11e-19!57;CL:0000355!2.11e-19!57;CL:0000393!2.48e-19!60;CL:0000211!2.48e-19!60;CL:0000183!1.36e-18!59;CL:0000187!1.49e-18!54;CL:0000192!3.96e-15!42;CL:0000514!3.96e-15!42;CL:0000359!6.99e-11!32;CL:0002620!2.43e-10!23;CL:0000222!1.59e-09!119;CL:0000048!1.75e-09!430;CL:0000723!6.37e-09!436;CL:0000034!8.42e-09!444;CL:0002371!2.95e-08!591;CL:0000144!3.32e-08!625;CL:0002334!3.48e-07!12;CL:0002570!9.42e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.00e-14;23!CL:0000187;1.44e-12;55!CL:0000057;1.83e-12;73!CL:0000192;2.03e-11;43!CL:0000134;2.70e-11;55!CL:0000723;5.03e-11;61!CL:0000393;1.24e-10;61!CL:0000211;1.24e-10;61!CL:0000048;1.10e-09;58!CL:0002334;1.13e-09;12!CL:0000359;1.35e-09;32!CL:0002320;2.09e-09;188!CL:0002570;4.71e-09;8!CL:0000499;4.50e-08;28!CL:0000034;5.12e-08;69!CL:0000188;3.20e-07;9!CL:0002539;5.41e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.73e-30,76;CL:0000048,1.79e-25,427;CL:0000723,2.07e-24,433;CL:0000034,4.81e-23,441;CL:0000680,6.12e-22,58;CL:0000056,6.12e-22,58;CL:0000355,6.12e-22,58;CL:0000187,1.62e-21,55;CL:0000393,7.65e-19,61;CL:0000211,7.65e-19,61;CL:0000192,5.70e-16,43;CL:0000514,5.70e-16,43;CL:0002620,9.90e-15,23;CL:0002320,2.61e-13,361;CL:0000134,2.39e-10,354;CL:0000359,8.59e-10,32;CL:0002334,9.01e-10,12;CL:0002570,3.83e-09,8;CL:0000219,6.68e-09,386;CL:0000499,4.10e-08,28;CL:0000222,5.86e-08,121;CL:0000188,4.15e-07,9;CL:0002539,6.35e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000355;8.99e-12;58!CL:0000514;2.03e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.66e-23!83;UBERON:0002329!1.66e-23!83;UBERON:0003077!1.66e-23!83;UBERON:0003059!1.66e-23!83;UBERON:0007282!1.66e-23!83;UBERON:0009618!1.66e-23!83;UBERON:0007285!1.66e-23!83;UBERON:0004290!1.10e-22!70;UBERON:0000486!4.53e-21!82;UBERON:0002385!1.60e-18!63;UBERON:0001015!1.60e-18!63;UBERON:0000383!1.60e-18!63;UBERON:0005256!2.56e-18!143;UBERON:0001134!2.67e-18!61;UBERON:0002036!2.67e-18!61;UBERON:0003082!2.67e-18!61;UBERON:0000475!1.60e-12!365;UBERON:0002100!3.67e-11!216;UBERON:0003102!2.11e-10!95;UBERON:0002199!2.46e-09!45;UBERON:0002416!2.46e-09!45;UBERON:0001013!2.75e-09!14;UBERON:0000490!2.22e-08!138;UBERON:0000481!5.10e-08!347;UBERON:0001135!2.34e-07!15;UBERON:0000468!3.13e-07!659;UBERON:0004872!4.33e-07!84;UBERON:0003104!4.65e-07!238;UBERON:0009142!4.65e-07!238;UBERON:0002097!5.69e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.17e-11;14!UBERON:0002385;2.67e-11;31!UBERON:0001015;2.67e-11;31!UBERON:0000383;2.67e-11;31!UBERON:0002384;5.27e-10;198!UBERON:0002199;8.84e-10;46!UBERON:0002416;8.84e-10;46!UBERON:0002204;2.10e-09;70!UBERON:0004905;2.99e-09;8!UBERON:0000982;2.99e-09;8!UBERON:0004770;2.99e-09;8!UBERON:0003102;6.32e-09;50!UBERON:0002097;1.73e-08;41!UBERON:0002067;1.40e-07;9!UBERON:0001135;2.05e-07;15!UBERON:0004457;2.30e-07;9!UBERON:0000042;2.30e-07;9!UBERON:0004237;5.41e-07;10!UBERON:0004695;5.41e-07;10!UBERON:0002111;5.41e-07;10!UBERON:0004178;5.41e-07;10!UBERON:0011135;8.20e-07;5!UBERON:0002216;8.20e-07;5!UBERON:0011134;8.20e-07;5!UBERON:0002209;8.20e-07;5!UBERON:0002213;8.20e-07;5!UBERON:0007844;8.20e-07;5!UBERON:0011138;8.20e-07;5!UBERON:0001130;8.20e-07;5!UBERON:0001066;8.20e-07;5!UBERON:0001468;8.20e-07;5 | |||
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| ||
|short_description=p@chr21:47406935..47406993,- | |short_description=p@chr21:47406935..47406993,- | ||
}} | }} |
Latest revision as of 18:42, 28 July 2015
Short description: | p@chr21:47406935..47406993, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47406935..47406993, - |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.73e-30 | 76 |
multi fate stem cell | 1.79e-25 | 427 |
somatic stem cell | 2.07e-24 | 433 |
stem cell | 4.81e-23 | 441 |
muscle precursor cell | 6.12e-22 | 58 |
myoblast | 6.12e-22 | 58 |
multi-potent skeletal muscle stem cell | 6.12e-22 | 58 |
muscle cell | 1.62e-21 | 55 |
electrically responsive cell | 7.65e-19 | 61 |
electrically active cell | 7.65e-19 | 61 |
smooth muscle cell | 5.70e-16 | 43 |
smooth muscle myoblast | 5.70e-16 | 43 |
skin fibroblast | 9.90e-15 | 23 |
connective tissue cell | 2.61e-13 | 361 |
mesenchymal cell | 2.39e-10 | 354 |
vascular associated smooth muscle cell | 8.59e-10 | 32 |
preadipocyte | 9.01e-10 | 12 |
mesenchymal stem cell of adipose | 3.83e-09 | 8 |
motile cell | 6.68e-09 | 386 |
stromal cell | 4.10e-08 | 28 |
mesodermal cell | 5.86e-08 | 121 |
cell of skeletal muscle | 4.15e-07 | 9 |
aortic smooth muscle cell | 6.35e-07 | 10 |