FFCP PHASE1:Hg19::chr21:26714551..26714589,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:26714551..26714589,+ | |||
|coexpression_cluster_id=C199 | |coexpression_cluster_id=C199 | ||
|description=CAGE_peak_at_chr21:26714551..26714589,+ | |description=CAGE_peak_at_chr21:26714551..26714589,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002149!6.87e-19!6;CL:0002255!6.87e-19!6 | |ontology_enrichment_celltype=CL:0002149!6.87e-19!6;CL:0002255!6.87e-19!6 | ||
|ontology_enrichment_celltype_v019=CL:0000054;3.52e-11;2!CL:0000137;3.52e-11;2!CL:0000092;3.52e-11;2 | |ontology_enrichment_celltype_v019=CL:0000054;3.52e-11;2!CL:0000137;3.52e-11;2!CL:0000092;3.52e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.73e-11,2;CL:0000137,2.73e-11,2;CL:0000092,2.73e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.62e-08;10 | |ontology_enrichment_development_v019=UBERON:0006238;2.62e-08;10 | ||
|ontology_enrichment_disease=DOID:3001!6.87e-19!6;DOID:120!3.60e-15!27;DOID:193!4.76e-14!29;DOID:3371!1.13e-08!1;DOID:4549!1.13e-08!1;DOID:5861!1.13e-08!1;DOID:6496!1.13e-08!1;DOID:0060085!1.31e-08!1;DOID:3165!1.31e-08!1;DOID:0060121!1.31e-08!1;DOID:2438!1.31e-08!1;DOID:4418!1.31e-08!1;DOID:2394!6.37e-08!14 | |ontology_enrichment_disease=DOID:3001!6.87e-19!6;DOID:120!3.60e-15!27;DOID:193!4.76e-14!29;DOID:3371!1.13e-08!1;DOID:4549!1.13e-08!1;DOID:5861!1.13e-08!1;DOID:6496!1.13e-08!1;DOID:0060085!1.31e-08!1;DOID:3165!1.31e-08!1;DOID:0060121!1.31e-08!1;DOID:2438!1.31e-08!1;DOID:4418!1.31e-08!1;DOID:2394!6.37e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:3371;2.30e-21;1!DOID:4549;2.30e-21;1!DOID:5861;2.30e-21;1!DOID:6496;2.30e-21;1!DOID:0060085;5.71e-21;1!DOID:3165;5.71e-21;1!DOID:0060121;5.71e-21;1!DOID:2438;5.71e-21;1!DOID:4418;5.71e-21;1!DOID:201;3.14e-14;6!DOID:0060100;3.14e-14;6!DOID:200;3.52e-11;2!DOID:4305;3.52e-11;2!DOID:3093;1.09e-07;11 | |ontology_enrichment_disease_v019=DOID:3371;2.30e-21;1!DOID:4549;2.30e-21;1!DOID:5861;2.30e-21;1!DOID:6496;2.30e-21;1!DOID:0060085;5.71e-21;1!DOID:3165;5.71e-21;1!DOID:0060121;5.71e-21;1!DOID:2438;5.71e-21;1!DOID:4418;5.71e-21;1!DOID:201;3.14e-14;6!DOID:0060100;3.14e-14;6!DOID:200;3.52e-11;2!DOID:4305;3.52e-11;2!DOID:3093;1.09e-07;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,2.30e-21,1;DOID:4549,2.30e-21,1;DOID:5861,2.30e-21,1;DOID:6496,2.30e-21,1;DOID:0060085,3.45e-21,1;DOID:3165,3.45e-21,1;DOID:0060121,3.45e-21,1;DOID:2438,3.45e-21,1;DOID:4418,3.45e-21,1;DOID:201,2.66e-14,6;DOID:0060100,2.66e-14,6;DOID:200,2.73e-11,2;DOID:4305,2.73e-11,2;DOID:3093,1.09e-07,11 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;5.18e-08;3!UBERON:0004755;5.18e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0002418;5.18e-08;3!UBERON:0004755;5.18e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,5.18e-08,3;UBERON:0004755,5.18e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06461206063404,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,4.76583084134101,0,0,1.9871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,39.6840281734953,41.4227271396839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,1.04397716786085,1.58694147858591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,3.82215575590973,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06461206063404,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,4.76583084134101,0,0,1.9871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,39.6840281734953,41.4227271396839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,1.04397716786085,1.58694147858591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,3.82215575590973,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr21:26714551..26714589,+ | |short_description=p@chr21:26714551..26714589,+ | ||
}} | }} |
Latest revision as of 16:56, 28 July 2015
Short description: | p@chr21:26714551..26714589, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:26714551..26714589, + |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.73e-11 | 2 |
osteocyte | 2.73e-11 | 2 |
osteoclast | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 5.18e-08 | 3 |
skeletal tissue | 5.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.30e-21 | 1 |
extraosseous chondrosarcoma | 2.30e-21 | 1 |
myxoid chondrosarcoma | 2.30e-21 | 1 |
extraskeletal myxoid chondrosarcoma | 2.30e-21 | 1 |
organ system benign neoplasm | 3.45e-21 | 1 |
skin benign neoplasm | 3.45e-21 | 1 |
integumentary system benign neoplasm | 3.45e-21 | 1 |
dermis tumor | 3.45e-21 | 1 |
cutaneous fibrous histiocytoma | 3.45e-21 | 1 |
connective tissue cancer | 2.66e-14 | 6 |
musculoskeletal system cancer | 2.66e-14 | 6 |
giant cell tumor | 2.73e-11 | 2 |
bone giant cell tumor | 2.73e-11 | 2 |
nervous system cancer | 1.09e-07 | 11 |