FFCP PHASE1:Hg19::chr20:5903323..5903338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5903323..5903338,+ | |||
|coexpression_cluster_id=C377 | |coexpression_cluster_id=C377 | ||
|description=CAGE_peak_at_chr20:5903323..5903338,+ | |description=CAGE_peak_at_chr20:5903323..5903338,+ | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.00e-14;1!CL:0000164;1.00e-14;1!CL:0000502;1.00e-14;1!CL:0000172;1.00e-14;1!CL:0000173;1.00e-14;1!CL:0002535;7.52e-08;2 | |ontology_enrichment_celltype_v019=CL:0000167;1.00e-14;1!CL:0000164;1.00e-14;1!CL:0000502;1.00e-14;1!CL:0000172;1.00e-14;1!CL:0000173;1.00e-14;1!CL:0002535;7.52e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,8.17e-15,1;CL:0000164,8.17e-15,1;CL:0000502,8.17e-15,1;CL:0000172,8.17e-15,1;CL:0000173,8.17e-15,1;CL:0002351,8.17e-15,1;CL:0002535,7.03e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.31e-18;3!CL:0002351;1.00e-14;1 | |ontology_enrichment_development_v019=UBERON:0006215;2.31e-18;3!CL:0002351;1.00e-14;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;1.00e-14;1!DOID:169;9.06e-10;6 | |ontology_enrichment_disease_v019=DOID:4430;1.00e-14;1!DOID:169;9.06e-10;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,8.17e-15,1;DOID:169,7.76e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.89e-64!57;UBERON:0005068!2.89e-64!57;UBERON:0006241!2.89e-64!57;UBERON:0007135!2.89e-64!57;UBERON:0002616!8.93e-62!59;UBERON:0000955!9.16e-60!69;UBERON:0006238!9.16e-60!69;UBERON:0002780!3.25e-55!41;UBERON:0001890!3.25e-55!41;UBERON:0006240!3.25e-55!41;UBERON:0003080!9.82e-54!42;UBERON:0001017!1.22e-51!82;UBERON:0005743!2.72e-51!86;UBERON:0000073!1.49e-50!94;UBERON:0001016!1.49e-50!94;UBERON:0003075!2.76e-49!86;UBERON:0007284!2.76e-49!86;UBERON:0002346!1.25e-46!90;UBERON:0002020!1.40e-41!34;UBERON:0003528!1.40e-41!34;UBERON:0001869!1.72e-40!32;UBERON:0003056!6.33e-40!61;UBERON:0007023!1.62e-38!115;UBERON:0001893!8.20e-38!34;UBERON:0000033!1.62e-36!123;UBERON:0002619!5.92e-36!22;UBERON:0002791!1.65e-35!33;UBERON:0000153!2.61e-34!129;UBERON:0007811!2.61e-34!129;UBERON:0000956!2.98e-31!25;UBERON:0000203!2.98e-31!25;UBERON:0001950!6.62e-31!20;UBERON:0004121!1.45e-27!169;UBERON:0000924!1.15e-26!173;UBERON:0006601!1.15e-26!173;UBERON:0001894!7.14e-21!7;UBERON:0006222!7.14e-21!7;UBERON:0001871!5.62e-17!7;UBERON:0000025!5.52e-16!194;UBERON:0004733!3.66e-15!12;UBERON:0002028!3.66e-15!12;UBERON:0007277!3.66e-15!12;UBERON:0004732!7.01e-14!13;UBERON:0003296!2.54e-13!4;UBERON:0010133!2.54e-13!4;UBERON:0002298!4.22e-13!8;UBERON:0004111!1.79e-12!241;UBERON:0000369!1.97e-12!4;UBERON:0002435!1.97e-12!4;UBERON:0000204!1.97e-12!4;UBERON:0010082!1.97e-12!4;UBERON:0003076!7.84e-12!15;UBERON:0003057!7.84e-12!15;UBERON:0000200!8.43e-12!6;UBERON:0002308!1.28e-11!9;UBERON:0000125!1.28e-11!9;UBERON:0000064!4.32e-11!219;UBERON:0000481!5.35e-11!347;UBERON:0000483!8.48e-11!309;UBERON:0000119!1.39e-10!312;UBERON:0000475!1.91e-10!365;UBERON:0000988!5.87e-10!3;UBERON:0005383!6.43e-10!3;UBERON:0005382!6.43e-10!3;UBERON:0000477!1.29e-09!286;UBERON:0000349!1.39e-09!5;UBERON:0001896!1.81e-09!3;UBERON:0005290!1.81e-09!3;UBERON:0010096!1.81e-09!3;UBERON:0002021!2.14e-09!5;UBERON:0002771!3.06e-09!3;UBERON:0002680!1.45e-08!9;UBERON:0001895!1.45e-08!9;UBERON:0010092!1.45e-08!9;UBERON:0002420!4.50e-08!9;UBERON:0007245!4.50e-08!9;UBERON:0010009!4.50e-08!9;UBERON:0010011!4.50e-08!9;UBERON:0000454!4.50e-08!9;UBERON:0000007!9.47e-08!2;UBERON:0001905!3.00e-07!2;UBERON:0002757!3.00e-07!2;UBERON:0010134!3.00e-07!2;UBERON:0002784!3.00e-07!2;UBERON:0005408!3.00e-07!2;UBERON:0001899!3.00e-07!2;UBERON:0001873!3.83e-07!2;UBERON:0010122!3.83e-07!2;UBERON:0009663!4.28e-07!7;UBERON:0002148!4.59e-07!2;UBERON:0009662!4.59e-07!2;UBERON:0001954!4.87e-07!2;UBERON:0003022!4.87e-07!2;UBERON:0002421!4.87e-07!2;UBERON:0002600!4.87e-07!2;UBERON:0000062!6.49e-07!511;UBERON:0001897!9.09e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!2.89e-64!57;UBERON:0005068!2.89e-64!57;UBERON:0006241!2.89e-64!57;UBERON:0007135!2.89e-64!57;UBERON:0002616!8.93e-62!59;UBERON:0000955!9.16e-60!69;UBERON:0006238!9.16e-60!69;UBERON:0002780!3.25e-55!41;UBERON:0001890!3.25e-55!41;UBERON:0006240!3.25e-55!41;UBERON:0003080!9.82e-54!42;UBERON:0001017!1.22e-51!82;UBERON:0005743!2.72e-51!86;UBERON:0000073!1.49e-50!94;UBERON:0001016!1.49e-50!94;UBERON:0003075!2.76e-49!86;UBERON:0007284!2.76e-49!86;UBERON:0002346!1.25e-46!90;UBERON:0002020!1.40e-41!34;UBERON:0003528!1.40e-41!34;UBERON:0001869!1.72e-40!32;UBERON:0003056!6.33e-40!61;UBERON:0007023!1.62e-38!115;UBERON:0001893!8.20e-38!34;UBERON:0000033!1.62e-36!123;UBERON:0002619!5.92e-36!22;UBERON:0002791!1.65e-35!33;UBERON:0000153!2.61e-34!129;UBERON:0007811!2.61e-34!129;UBERON:0000956!2.98e-31!25;UBERON:0000203!2.98e-31!25;UBERON:0001950!6.62e-31!20;UBERON:0004121!1.45e-27!169;UBERON:0000924!1.15e-26!173;UBERON:0006601!1.15e-26!173;UBERON:0001894!7.14e-21!7;UBERON:0006222!7.14e-21!7;UBERON:0001871!5.62e-17!7;UBERON:0000025!5.52e-16!194;UBERON:0004733!3.66e-15!12;UBERON:0002028!3.66e-15!12;UBERON:0007277!3.66e-15!12;UBERON:0004732!7.01e-14!13;UBERON:0003296!2.54e-13!4;UBERON:0010133!2.54e-13!4;UBERON:0002298!4.22e-13!8;UBERON:0004111!1.79e-12!241;UBERON:0000369!1.97e-12!4;UBERON:0002435!1.97e-12!4;UBERON:0000204!1.97e-12!4;UBERON:0010082!1.97e-12!4;UBERON:0003076!7.84e-12!15;UBERON:0003057!7.84e-12!15;UBERON:0000200!8.43e-12!6;UBERON:0002308!1.28e-11!9;UBERON:0000125!1.28e-11!9;UBERON:0000064!4.32e-11!219;UBERON:0000481!5.35e-11!347;UBERON:0000483!8.48e-11!309;UBERON:0000119!1.39e-10!312;UBERON:0000475!1.91e-10!365;UBERON:0000988!5.87e-10!3;UBERON:0005383!6.43e-10!3;UBERON:0005382!6.43e-10!3;UBERON:0000477!1.29e-09!286;UBERON:0000349!1.39e-09!5;UBERON:0001896!1.81e-09!3;UBERON:0005290!1.81e-09!3;UBERON:0010096!1.81e-09!3;UBERON:0002021!2.14e-09!5;UBERON:0002771!3.06e-09!3;UBERON:0002680!1.45e-08!9;UBERON:0001895!1.45e-08!9;UBERON:0010092!1.45e-08!9;UBERON:0002420!4.50e-08!9;UBERON:0007245!4.50e-08!9;UBERON:0010009!4.50e-08!9;UBERON:0010011!4.50e-08!9;UBERON:0000454!4.50e-08!9;UBERON:0000007!9.47e-08!2;UBERON:0001905!3.00e-07!2;UBERON:0002757!3.00e-07!2;UBERON:0010134!3.00e-07!2;UBERON:0002784!3.00e-07!2;UBERON:0005408!3.00e-07!2;UBERON:0001899!3.00e-07!2;UBERON:0001873!3.83e-07!2;UBERON:0010122!3.83e-07!2;UBERON:0009663!4.28e-07!7;UBERON:0002148!4.59e-07!2;UBERON:0009662!4.59e-07!2;UBERON:0001954!4.87e-07!2;UBERON:0003022!4.87e-07!2;UBERON:0002421!4.87e-07!2;UBERON:0002600!4.87e-07!2;UBERON:0000062!6.49e-07!511;UBERON:0001897!9.09e-07!2 | ||
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| ||
|short_description=p@chr20:5903323..5903338,+ | |short_description=p@chr20:5903323..5903338,+ | ||
}} | }} |
Latest revision as of 16:00, 28 July 2015
Short description: | p@chr20:5903323..5903338, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903323..5903338, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 8.17e-15 | 1 |
enteroendocrine cell | 8.17e-15 | 1 |
type D enteroendocrine cell | 8.17e-15 | 1 |
somatostatin secreting cell | 8.17e-15 | 1 |
pancreatic D cell | 8.17e-15 | 1 |
progenitor cell of endocrine pancreas | 8.17e-15 | 1 |
epithelial cell of cervix | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 8.17e-15 | 1 |
neuroendocrine tumor | 7.76e-10 | 6 |