FFCP PHASE1:Hg19::chr20:5903323..5903338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5903323..5903338,+ | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903323..5903338,+ | |description=CAGE_peak_at_chr20:5903323..5903338,+ | ||
|id=chr20:5903323..5903338,+ | |id=chr20:5903323..5903338,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.00e-14;1!CL:0000164;1.00e-14;1!CL:0000502;1.00e-14;1!CL:0000172;1.00e-14;1!CL:0000173;1.00e-14;1!CL:0002535;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,8.17e-15,1;CL:0000164,8.17e-15,1;CL:0000502,8.17e-15,1;CL:0000172,8.17e-15,1;CL:0000173,8.17e-15,1;CL:0002351,8.17e-15,1;CL:0002535,7.03e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.31e-18;3!CL:0002351;1.00e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.00e-14;1!DOID:169;9.06e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,8.17e-15,1;DOID:169,7.76e-10,6 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0003296,8.56e-31,4;UBERON:0010133,8.56e-31,4;UBERON:0000007,5.41e-28,2;UBERON:0001894,6.60e-18,7;UBERON:0006222,6.60e-18,7;UBERON:0000073,6.28e-15,53;UBERON:0002616,6.28e-15,53;UBERON:0003112,2.41e-14,1;UBERON:0011158,2.41e-14,1;UBERON:0003128,2.41e-14,1;UBERON:0001703,2.41e-14,1;UBERON:0002241,2.41e-14,1;UBERON:0004761,2.41e-14,1;UBERON:0009617,2.41e-14,1;UBERON:0001049,4.19e-14,56;UBERON:0005068,4.19e-14,56;UBERON:0006241,4.19e-14,56;UBERON:0007135,4.19e-14,56;UBERON:0002680,1.42e-13,9;UBERON:0001895,1.42e-13,9;UBERON:0010092,1.42e-13,9;UBERON:0000955,2.40e-11,68;UBERON:0006238,2.40e-11,68;UBERON:0001016,1.08e-10,89;UBERON:0004733,2.48e-10,12;UBERON:0002028,2.48e-10,12;UBERON:0007277,2.48e-10,12;UBERON:0002037,1.26e-09,6;UBERON:0006215,1.26e-09,6;UBERON:0004732,1.40e-09,13;UBERON:0001017,1.91e-09,81;UBERON:0003075,1.91e-09,82;UBERON:0007284,1.91e-09,82;UBERON:0002346,5.64e-09,86;UBERON:0007023,2.07e-08,114;UBERON:0003076,2.24e-08,15;UBERON:0003057,2.24e-08,15;UBERON:0001954,5.37e-08,2;UBERON:0003022,5.37e-08,2;UBERON:0002421,5.37e-08,2;UBERON:0002600,5.37e-08,2;UBERON:0001905,5.74e-08,2;UBERON:0002757,5.74e-08,2;UBERON:0010134,5.74e-08,2;UBERON:0005408,5.74e-08,2;UBERON:0001899,5.74e-08,2;UBERON:0002780,5.93e-08,41;UBERON:0001890,5.93e-08,41;UBERON:0003080,5.93e-08,41;UBERON:0006240,5.93e-08,41;UBERON:0006955,7.03e-08,2;UBERON:0004801,7.03e-08,2;UBERON:0005253,8.04e-08,2;UBERON:0010371,2.69e-07,104;UBERON:0010314,4.51e-07,132 | |||
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|short_description=p@chr20:5903323..5903338,+ | |short_description=p@chr20:5903323..5903338,+ | ||
}} | }} |
Latest revision as of 16:00, 28 July 2015
Short description: | p@chr20:5903323..5903338, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903323..5903338, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 8.17e-15 | 1 |
enteroendocrine cell | 8.17e-15 | 1 |
type D enteroendocrine cell | 8.17e-15 | 1 |
somatostatin secreting cell | 8.17e-15 | 1 |
pancreatic D cell | 8.17e-15 | 1 |
progenitor cell of endocrine pancreas | 8.17e-15 | 1 |
epithelial cell of cervix | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 8.17e-15 | 1 |
neuroendocrine tumor | 7.76e-10 | 6 |