FFCP PHASE1:Hg19::chr20:33851543..33851550,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:33851543..33851550,+
|short_description=p@chr20:33851543..33851550,+
|description=CAGE_peak_at_chr20:33851543..33851550,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:33851543..33851550,+ | |||
|coexpression_cluster_id=C1867 | |||
|description=CAGE_peak_at_chr20:33851543..33851550,+ | |||
|id=chr20:33851543..33851550,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.89e-11!254;CL:1000415!3.52e-10!2;CL:1000497!5.52e-09!18;CL:0002518!5.52e-09!18;CL:0000077!3.13e-08!19;CL:1000449!3.37e-07!16;CL:0000239!4.05e-07!3;CL:1000615!4.05e-07!3;CL:0002306!4.05e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.30e-18;17!CL:0002518;3.30e-18;17!CL:1000449;7.75e-10;15!CL:0002188;5.54e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.21e-18,17;CL:0002518,3.21e-18,17;CL:1000449,8.10e-10,15;CL:0002188,5.73e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.30e-14!106;DOID:0050687!3.06e-10!143;DOID:162!4.80e-07!235;DOID:14566!8.75e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:4468;9.86e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,9.07e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.11e-12!9;UBERON:0002294!6.69e-11!7;UBERON:0001173!6.69e-11!7;UBERON:0004912!6.69e-11!7;UBERON:0002113!8.04e-10!27;UBERON:0003918!8.04e-10!27;UBERON:0005095!8.04e-10!27;UBERON:0007687!8.04e-10!27;UBERON:0005172!1.41e-09!55;UBERON:0005173!1.41e-09!55;UBERON:0002417!2.14e-08!61;UBERON:0000916!2.14e-08!61;UBERON:0000489!4.39e-08!32;UBERON:0008947!4.85e-08!38;UBERON:0003258!4.85e-08!38;UBERON:0000058!5.02e-08!26;UBERON:0005177!2.38e-07!107;UBERON:0004211!3.37e-07!16;UBERON:0001285!3.37e-07!16;UBERON:0007684!3.37e-07!16;UBERON:0003220!3.37e-07!16;UBERON:0004208!3.37e-07!16;UBERON:0001851!3.91e-07!16;UBERON:0006853!4.05e-07!3;UBERON:0007685!4.05e-07!3;UBERON:0004134!4.05e-07!3;UBERON:0002110!4.71e-07!3;UBERON:0006242!4.71e-07!3;UBERON:0006554!6.24e-07!44;UBERON:0009569!8.79e-07!113;UBERON:0006555!9.38e-07!17;UBERON:0005103!9.38e-07!17;UBERON:0000083!9.38e-07!17;UBERON:0009201!9.38e-07!17;UBERON:0004819!9.38e-07!17;UBERON:0006553!9.38e-07!17;UBERON:0003074!9.38e-07!17;UBERON:0003060!9.38e-07!17;UBERON:0001008!9.62e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;3.86e-13;24!UBERON:0011143;3.86e-13;24!UBERON:0000489;5.23e-11;29!UBERON:0006554;1.15e-10;30!UBERON:0001008;1.15e-10;30!UBERON:0006555;7.75e-10;15!UBERON:0004819;7.75e-10;15!UBERON:0001285;7.75e-10;15!UBERON:0007684;7.75e-10;15!UBERON:0002394;1.50e-09;4!UBERON:0003928;1.50e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.38e-12,26;UBERON:0003918,3.38e-12,26;UBERON:0011143,3.38e-12,26;UBERON:0005095,3.38e-12,26;UBERON:0007687,3.38e-12,26;UBERON:0000489,2.36e-10,31;UBERON:0004211,8.10e-10,15;UBERON:0009773,8.10e-10,15;UBERON:0001231,8.10e-10,15;UBERON:0001285,8.10e-10,15;UBERON:0007684,8.10e-10,15;UBERON:0004208,8.10e-10,15;UBERON:0006555,2.89e-09,16;UBERON:0004819,2.89e-09,16;UBERON:0000058,6.15e-08,19;UBERON:0006554,4.59e-07,47;UBERON:0001008,6.25e-07,48;UBERON:0002394,9.49e-07,6;UBERON:0003928,9.49e-07,6 | |||
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| ||
|short_description=p@chr20:33851543..33851550,+ | |||
}} | }} |
Latest revision as of 13:22, 28 July 2015
Short description: | p@chr20:33851543..33851550, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33851543..33851550, + |
Coexpression cluster: | C1867_renal_bile_clear_Alveolar_mesothelioma_lung_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.21e-18 | 17 |
kidney epithelial cell | 3.21e-18 | 17 |
epithelial cell of nephron | 8.10e-10 | 15 |
glomerular endothelial cell | 5.73e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
kidney | 3.38e-12 | 26 |
kidney mesenchyme | 3.38e-12 | 26 |
upper urinary tract | 3.38e-12 | 26 |
kidney rudiment | 3.38e-12 | 26 |
kidney field | 3.38e-12 | 26 |
cavitated compound organ | 2.36e-10 | 31 |
nephron epithelium | 8.10e-10 | 15 |
renal tubule | 8.10e-10 | 15 |
nephron tubule | 8.10e-10 | 15 |
nephron | 8.10e-10 | 15 |
uriniferous tubule | 8.10e-10 | 15 |
nephrogenic mesenchyme | 8.10e-10 | 15 |
excretory tube | 2.89e-09 | 16 |
kidney epithelium | 2.89e-09 | 16 |
duct | 6.15e-08 | 19 |
urinary system structure | 4.59e-07 | 47 |
renal system | 6.25e-07 | 48 |
bile duct | 9.49e-07 | 6 |
digestive system duct | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 9.07e-18 | 2 |