FFCP PHASE1:Hg19::chr20:25255311..25255332,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:25255311..25255332,+ | |||
|description=CAGE_peak_at_chr20:25255311..25255332,+ | |description=CAGE_peak_at_chr20:25255311..25255332,+ | ||
|id=chr20:25255311..25255332,+ | |id=chr20:25255311..25255332,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.08e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;6.27e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.24e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.34e-15!115;UBERON:0000923!5.96e-09!604;UBERON:0005291!5.96e-09!604;UBERON:0006598!5.96e-09!604;UBERON:0002532!5.96e-09!604;UBERON:0002050!7.97e-09!605;UBERON:0005423!7.97e-09!605;UBERON:0000922!9.59e-09!612;UBERON:0000062!2.14e-08!511;UBERON:0000467!7.78e-08!625;UBERON:0000475!9.48e-08!365;UBERON:0000480!1.02e-07!626;UBERON:0004121!1.67e-07!169;UBERON:0000468!3.53e-07!659;UBERON:0000924!3.76e-07!173;UBERON:0006601!3.76e-07!173;UBERON:0000033!9.85e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!2.34e-15!115;UBERON:0000923!5.96e-09!604;UBERON:0005291!5.96e-09!604;UBERON:0006598!5.96e-09!604;UBERON:0002532!5.96e-09!604;UBERON:0002050!7.97e-09!605;UBERON:0005423!7.97e-09!605;UBERON:0000922!9.59e-09!612;UBERON:0000062!2.14e-08!511;UBERON:0000467!7.78e-08!625;UBERON:0000475!9.48e-08!365;UBERON:0000480!1.02e-07!626;UBERON:0004121!1.67e-07!169;UBERON:0000468!3.53e-07!659;UBERON:0000924!3.76e-07!173;UBERON:0006601!3.76e-07!173;UBERON:0000033!9.85e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;8.85e-12;3!UBERON:0001044;2.23e-10;6!UBERON:0003293;2.23e-10;6!UBERON:0003294;2.23e-10;6!UBERON:0010047;2.23e-10;6!UBERON:0003408;2.23e-10;6!UBERON:0000167;2.23e-10;6!UBERON:0001829;2.06e-08;2!UBERON:0002081;2.06e-08;2!UBERON:0011135;3.08e-07;5!UBERON:0002216;3.08e-07;5!UBERON:0011134;3.08e-07;5!UBERON:0002209;3.08e-07;5!UBERON:0002213;3.08e-07;5!UBERON:0007844;3.08e-07;5!UBERON:0011138;3.08e-07;5!UBERON:0001130;3.08e-07;5!UBERON:0001066;3.08e-07;5!UBERON:0001468;3.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,4.74e-12,3;UBERON:0001044,3.15e-10,6;UBERON:0003293,3.15e-10,6;UBERON:0003294,3.15e-10,6;UBERON:0010047,3.15e-10,6;UBERON:0000167,3.15e-10,6;UBERON:0002081,1.09e-08,2;UBERON:0010227,1.09e-08,2;UBERON:0007023,1.76e-08,114;UBERON:0001829,2.91e-08,2;UBERON:0003064,2.67e-07,28;UBERON:0011135,4.58e-07,5;UBERON:0002216,4.58e-07,5;UBERON:0011134,4.58e-07,5;UBERON:0002209,4.58e-07,5;UBERON:0002213,4.58e-07,5;UBERON:0005856,4.58e-07,5;UBERON:0005866,4.58e-07,5;UBERON:0005863,4.58e-07,5;UBERON:0007844,4.58e-07,5;UBERON:0011138,4.58e-07,5;UBERON:0001130,4.58e-07,5;UBERON:0001066,4.58e-07,5;UBERON:0001468,4.58e-07,5;UBERON:0000080,5.21e-07,9;UBERON:0002120,5.21e-07,9;UBERON:0004875,5.21e-07,9;UBERON:0005721,5.21e-07,9;UBERON:0005754,5.21e-07,9;UBERON:0007297,5.21e-07,9 | |||
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| ||
|short_description=p@chr20:25255311..25255332,+ | |short_description=p@chr20:25255311..25255332,+ | ||
}} | }} |
Latest revision as of 12:41, 28 July 2015
Short description: | p@chr20:25255311..25255332, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:25255311..25255332, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 4.74e-12 | 3 |
saliva-secreting gland | 3.15e-10 | 6 |
gland of oral region | 3.15e-10 | 6 |
gland of foregut | 3.15e-10 | 6 |
oral gland | 3.15e-10 | 6 |
oral cavity | 3.15e-10 | 6 |
cardiac atrium | 1.09e-08 | 2 |
future cardiac atrium | 1.09e-08 | 2 |
adult organism | 1.76e-08 | 114 |
major salivary gland | 2.91e-08 | 2 |
intermediate mesoderm | 2.67e-07 | 28 |
intervertebral cartilage | 4.58e-07 | 5 |
symphysis | 4.58e-07 | 5 |
nonsynovial joint | 4.58e-07 | 5 |
fibrous joint | 4.58e-07 | 5 |
cartilaginous joint | 4.58e-07 | 5 |
developing mesenchymal condensation | 4.58e-07 | 5 |
pre-cartilage condensation | 4.58e-07 | 5 |
cartilaginous condensation | 4.58e-07 | 5 |
cartilage element | 4.58e-07 | 5 |
post-cranial axial skeletal system | 4.58e-07 | 5 |
vertebral column | 4.58e-07 | 5 |
intervertebral disk | 4.58e-07 | 5 |
intervertebral joint | 4.58e-07 | 5 |
mesonephros | 5.21e-07 | 9 |
pronephros | 5.21e-07 | 9 |
nephrogenic cord | 5.21e-07 | 9 |
pronephric mesoderm | 5.21e-07 | 9 |
rostral part of nephrogenic cord | 5.21e-07 | 9 |
presumptive pronephric mesoderm | 5.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.24e-09 | 2 |