FFCP PHASE1:Hg19::chr1:94583454..94583465,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94583454..94583465,- | |||
|coexpression_cluster_id=C296 | |||
|description=CAGE_peak_at_chr1:94583454..94583465,- | |description=CAGE_peak_at_chr1:94583454..94583465,- | ||
|id=chr1:94583454..94583465,- | |id=chr1:94583454..94583465,- | ||
|ontology_enrichment_celltype=CL:0000342!1.31e-08!1;CL:0002565!1.31e-08!1 | |ontology_enrichment_celltype=CL:0000342!1.31e-08!1;CL:0002565!1.31e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000342;3.30e-40;1!CL:0002565;3.30e-40;1!CL:1000415;3.11e-21;2!CL:0002149;5.92e-08;6!CL:0002255;5.92e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,3.30e-40,1;CL:0002565,3.30e-40,1;CL:1000415,3.11e-21,2;CL:0002149,5.92e-08,6;CL:0002255,5.92e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.66e-21;2 | |||
|ontology_enrichment_disease=DOID:5093!7.18e-08!4;DOID:1612!7.18e-08!4 | |ontology_enrichment_disease=DOID:5093!7.18e-08!4;DOID:1612!7.18e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:3001;5.92e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0006947!5.79e-22!3;UBERON:0004054!5.79e-22!3;UBERON:0005904!1.27e-16!4;UBERON:0003135!8.53e-16!11;UBERON:0003101!7.37e-11!22;UBERON:0000079!7.37e-11!22;UBERON:0002113!7.30e-09!27;UBERON:0003918!7.30e-09!27;UBERON:0005095!7.30e-09!27;UBERON:0007687!7.30e-09!27;UBERON:0001301!1.13e-08!1;UBERON:0002506!1.31e-08!1;UBERON:0001769!1.31e-08!1;UBERON:0000998!2.17e-08!1;UBERON:0006868!2.17e-08!1;UBERON:0001000!2.33e-08!1;UBERON:0005352!2.33e-08!1;UBERON:0000473!2.43e-08!8;UBERON:0000489!2.15e-07!32;UBERON:0006554!6.33e-07!44;UBERON:0001008!9.41e-07!45 | |ontology_enrichment_uberon=UBERON:0006947!5.79e-22!3;UBERON:0004054!5.79e-22!3;UBERON:0005904!1.27e-16!4;UBERON:0003135!8.53e-16!11;UBERON:0003101!7.37e-11!22;UBERON:0000079!7.37e-11!22;UBERON:0002113!7.30e-09!27;UBERON:0003918!7.30e-09!27;UBERON:0005095!7.30e-09!27;UBERON:0007687!7.30e-09!27;UBERON:0001301!1.13e-08!1;UBERON:0002506!1.31e-08!1;UBERON:0001769!1.31e-08!1;UBERON:0000998!2.17e-08!1;UBERON:0006868!2.17e-08!1;UBERON:0001000!2.33e-08!1;UBERON:0005352!2.33e-08!1;UBERON:0000473!2.43e-08!8;UBERON:0000489!2.15e-07!32;UBERON:0006554!6.33e-07!44;UBERON:0001008!9.41e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.48e-40;1!UBERON:0002506;3.30e-40;1!UBERON:0001769;3.30e-40;1!UBERON:0002110;1.22e-14;3!UBERON:0006947;1.60e-14;3!UBERON:0004054;1.60e-14;3!UBERON:0005904;3.10e-11;4!UBERON:0000488;3.79e-11;4!UBERON:0004175;1.37e-08;21!UBERON:0002203;7.25e-08;6!UBERON:0001768;7.25e-08;6!UBERON:0002200;7.25e-08;6!UBERON:0002294;5.08e-07;7!UBERON:0001173;5.08e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.48e-40,1;UBERON:0002506,3.30e-40,1;UBERON:0001769,3.30e-40,1;UBERON:0002110,1.22e-14,3;UBERON:0006242,1.22e-14,3;UBERON:0006947,1.60e-14,3;UBERON:0004054,1.60e-14,3;UBERON:0005904,3.10e-11,4;UBERON:0000488,3.79e-11,4;UBERON:0002203,7.25e-08,6;UBERON:0001768,7.25e-08,6;UBERON:0002200,7.25e-08,6;UBERON:0005172,2.08e-07,54;UBERON:0005173,2.08e-07,54;UBERON:0004175,2.28e-07,25;UBERON:0002113,4.28e-07,26;UBERON:0003918,4.28e-07,26;UBERON:0011143,4.28e-07,26;UBERON:0005095,4.28e-07,26;UBERON:0007687,4.28e-07,26;UBERON:0002417,9.72e-07,60;UBERON:0000916,9.72e-07,60 | |||
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|short_description=p@chr1:94583454..94583465,- | |short_description=p@chr1:94583454..94583465,- | ||
}} | }} |
Latest revision as of 11:30, 28 July 2015
Short description: | p@chr1:94583454..94583465, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94583454..94583465, - |
Coexpression cluster: | C296_gall_small_mesothelioma_acute_bronchioalveolar_epidermoid_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 3.30e-40 | 1 |
iris pigment epithelial cell | 3.30e-40 | 1 |
epithelial cell of gall bladder | 3.11e-21 | 2 |
epithelial cell of uterus | 5.92e-08 | 6 |
stromal cell of endometrium | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.48e-40 | 1 |
iris epithelium | 3.30e-40 | 1 |
iris | 3.30e-40 | 1 |
gallbladder | 1.22e-14 | 3 |
gall bladder primordium | 1.22e-14 | 3 |
male genital duct | 1.60e-14 | 3 |
internal male genitalia | 1.60e-14 | 3 |
duct of male reproductive system | 3.10e-11 | 4 |
atypical epithelium | 3.79e-11 | 4 |
vasculature of eye | 7.25e-08 | 6 |
uvea | 7.25e-08 | 6 |
vasculature of head | 7.25e-08 | 6 |
abdomen element | 2.08e-07 | 54 |
abdominal segment element | 2.08e-07 | 54 |
internal genitalia | 2.28e-07 | 25 |
kidney | 4.28e-07 | 26 |
kidney mesenchyme | 4.28e-07 | 26 |
upper urinary tract | 4.28e-07 | 26 |
kidney rudiment | 4.28e-07 | 26 |
kidney field | 4.28e-07 | 26 |
abdominal segment of trunk | 9.72e-07 | 60 |
abdomen | 9.72e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.92e-08 | 6 |