FFCP PHASE1:Hg19::chr1:246383189..246383211,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:246383189..246383211,-
|short_description=p@chr1:246383189..246383211,-
|description=CAGE_peak_at_chr1:246383189..246383211,-
|association_with_transcript=...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:246383189..246383211,- | |||
|coexpression_cluster_id=C740 | |||
|description=CAGE_peak_at_chr1:246383189..246383211,- | |||
|id=chr1:246383189..246383211,- | |||
|ontology_enrichment_celltype=CL:0000163!7.85e-15!9;CL:0002274!3.13e-12!5;CL:0000457!3.13e-12!5;CL:0002191!3.13e-12!5;CL:0000097!3.13e-12!5;CL:0000831!3.13e-12!5;CL:0002028!3.13e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.82e-21;1!CL:0000167;4.67e-21;1!CL:0000164;4.67e-21;1!CL:0000502;4.67e-21;1!CL:0000172;4.67e-21;1!CL:0000173;4.67e-21;1!CL:0002535;4.30e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.82e-21,1;CL:0000167,4.22e-21,1;CL:0000164,4.22e-21,1;CL:0000502,4.22e-21,1;CL:0000172,4.22e-21,1;CL:0000173,4.22e-21,1;CL:0002351,4.22e-21,1;CL:0002535,4.09e-11,2 | |||
|ontology_enrichment_development_v019=CL:0002351;4.67e-21;1 | |||
|ontology_enrichment_disease=DOID:0050686!1.16e-09!137;DOID:162!1.64e-09!235;DOID:5409!2.14e-09!4;DOID:14566!3.68e-09!239;DOID:0050615!2.26e-08!16 | |||
|ontology_enrichment_disease_v019=DOID:4430;4.67e-21;1!DOID:4362;9.94e-17;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.22e-21,1;DOID:4362,9.55e-17,5;DOID:0050686,3.14e-11,137;DOID:162,6.25e-08,235;DOID:14566,9.40e-08,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;4.10e-14;6!UBERON:0001560;4.10e-14;6!UBERON:0006955;4.30e-11;2!UBERON:0004801;4.30e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,3.97e-14,6;UBERON:0001560,3.97e-14,6;UBERON:0006955,4.09e-11,2;UBERON:0004801,4.09e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38677732358213,0,0,0,0,2.50634477090067,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0.613612095012929,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0.0633107959558787,0,0,0,0,0,0,57.8275142794821,0,0,0,0,0.418411385249333,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0.164831716762333,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,27.219405441706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,9.59151800194633,0,0,0.22589216407792,0.109940516745429,41.0618934501352,0,0,68.1960079724208,0,3.77082475362602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38677732358213,0,0,0,0,2.50634477090067,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0.613612095012929,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0.0633107959558787,0,0,0,0,0,0,57.8275142794821,0,0,0,0,0.418411385249333,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0.164831716762333,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,27.219405441706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,9.59151800194633,0,0,0.22589216407792,0.109940516745429,41.0618934501352,0,0,68.1960079724208,0,3.77082475362602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:246383189..246383211,- | |||
}} | }} |
Latest revision as of 06:04, 28 July 2015
Short description: | p@chr1:246383189..246383211, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:246383189..246383211, - |
Coexpression cluster: | C740_gastrointestinal_smallcell_small_nonsmall_neuroblastoma_temporal_somatostatinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.82e-21 | 1 |
peptide hormone secreting cell | 4.22e-21 | 1 |
enteroendocrine cell | 4.22e-21 | 1 |
type D enteroendocrine cell | 4.22e-21 | 1 |
somatostatin secreting cell | 4.22e-21 | 1 |
pancreatic D cell | 4.22e-21 | 1 |
progenitor cell of endocrine pancreas | 4.22e-21 | 1 |
epithelial cell of cervix | 4.09e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 3.97e-14 | 6 |
neck of organ | 3.97e-14 | 6 |
uterine epithelium | 4.09e-11 | 2 |
cervix epithelium | 4.09e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.22e-21 | 1 |
cervical cancer | 9.55e-17 | 5 |
organ system cancer | 3.14e-11 | 137 |
cancer | 6.25e-08 | 235 |
disease of cellular proliferation | 9.40e-08 | 239 |