FFCP PHASE1:Hg19::chr1:240926680..240926686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:240926680..240926686,+ | |||
|coexpression_cluster_id=C277 | |||
|description=CAGE_peak_at_chr1:240926680..240926686,+ | |description=CAGE_peak_at_chr1:240926680..240926686,+ | ||
|id=chr1:240926680..240926686,+ | |id=chr1:240926680..240926686,+ | ||
|ontology_enrichment_celltype=CL:0000077!2.94e-15!19;CL:0000066!2.34e-13!254;CL:0000076!5.74e-07!62 | |ontology_enrichment_celltype=CL:0000077!2.94e-15!19;CL:0000066!2.34e-13!254;CL:0000076!5.74e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.62e-38;19!CL:0002097;2.31e-13;2!CL:0000174;3.32e-09;3!CL:0000511;2.39e-07;1!CL:0002625;2.39e-07;1!CL:0000216;2.39e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.40e-38,19;CL:0000076,1.75e-14,63;CL:0002097,2.24e-13,2;CL:0000213,2.81e-11,58;CL:0000215,2.81e-11,58;CL:0000174,3.26e-09,3;CL:0000511,2.04e-07,1;CL:0002625,2.04e-07,1;CL:0000216,2.04e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.52e-16!235;DOID:14566!2.03e-15!239;DOID:0050687!1.52e-13!143;DOID:305!1.54e-09!106;DOID:1115!2.82e-07!20 | |ontology_enrichment_disease=DOID:162!3.52e-16!235;DOID:14566!2.03e-15!239;DOID:0050687!1.52e-13!143;DOID:305!1.54e-09!106;DOID:1115!2.82e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:3371;5.22e-08;1!DOID:4549;5.22e-08;1!DOID:5861;5.22e-08;1!DOID:6496;5.22e-08;1!DOID:6193;6.37e-08;1!DOID:3369;2.39e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.38e-09,235;DOID:14566,2.72e-09,239;DOID:3371,5.22e-08,1;DOID:4549,5.22e-08,1;DOID:5861,5.22e-08,1;DOID:6496,5.22e-08,1;DOID:6193,6.37e-08,1;DOID:3369,1.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.22e-07!8 | |ontology_enrichment_uberon=UBERON:0000473!5.22e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.04e-12;8!UBERON:0002369;3.32e-09;3!UBERON:0001235;3.32e-09;3!UBERON:0006858;3.32e-09;3!UBERON:0003135;4.51e-09;11!UBERON:0001282;1.30e-07;1!UBERON:0009842;1.30e-07;1!UBERON:0003704;1.30e-07;1!UBERON:0001171;1.30e-07;1!UBERON:0001172;1.30e-07;1!UBERON:0001136;2.39e-07;1!UBERON:0001343;2.39e-07;1!UBERON:0004910;2.39e-07;1!UBERON:0004813;2.39e-07;1!UBERON:0003101;9.62e-07;22!UBERON:0000079;9.62e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.13e-12,8;UBERON:0002369,3.26e-09,3;UBERON:0001235,3.26e-09,3;UBERON:0006858,3.26e-09,3;UBERON:0003135,4.66e-09,11;UBERON:0001282,1.22e-07,1;UBERON:0009842,1.22e-07,1;UBERON:0003704,1.22e-07,1;UBERON:0001171,1.22e-07,1;UBERON:0001172,1.22e-07,1;UBERON:0001136,2.04e-07,1;UBERON:0001343,2.04e-07,1;UBERON:0004910,2.04e-07,1;UBERON:0005154,2.04e-07,1;UBERON:0005295,2.04e-07,1;UBERON:0004813,2.04e-07,1;UBERON:0005297,2.04e-07,1;UBERON:0005294,2.04e-07,1;UBERON:0010141,2.04e-07,1;UBERON:0005891,2.04e-07,1 | |||
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| ||
|short_description=p@chr1:240926680..240926686,+ | |short_description=p@chr1:240926680..240926686,+ | ||
}} | }} |
Latest revision as of 05:40, 28 July 2015
Short description: | p@chr1:240926680..240926686, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:240926680..240926686, + |
Coexpression cluster: | C277_mesothelioma_epithelioid_thyroid_extraskeletal_alveolar_glioblastoma_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.40e-38 | 19 |
squamous epithelial cell | 1.75e-14 | 63 |
cortical cell of adrenal gland | 2.24e-13 | 2 |
lining cell | 2.81e-11 | 58 |
barrier cell | 2.81e-11 | 58 |
steroid hormone secreting cell | 3.26e-09 | 3 |
androgen binding protein secreting cell | 2.04e-07 | 1 |
seminiferous tubule epithelial cell | 2.04e-07 | 1 |
Sertoli cell | 2.04e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 2.13e-12 | 8 |
adrenal gland | 3.26e-09 | 3 |
adrenal cortex | 3.26e-09 | 3 |
adrenal/interrenal gland | 3.26e-09 | 3 |
male reproductive organ | 4.66e-09 | 11 |
intralobular bile duct | 1.22e-07 | 1 |
acinus | 1.22e-07 | 1 |
intrahepatic bile duct | 1.22e-07 | 1 |
portal lobule | 1.22e-07 | 1 |
hepatic acinus | 1.22e-07 | 1 |
mesothelium | 2.04e-07 | 1 |
seminiferous tubule of testis | 2.04e-07 | 1 |
epithelium of male gonad | 2.04e-07 | 1 |
epithelial cord | 2.04e-07 | 1 |
sex cord | 2.04e-07 | 1 |
seminiferous tubule epithelium | 2.04e-07 | 1 |
testis sex cord | 2.04e-07 | 1 |
genital ridge | 2.04e-07 | 1 |
primitive sex cord of indifferent gonad | 2.04e-07 | 1 |
coelomic epithelium | 2.04e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.38e-09 | 235 |
disease of cellular proliferation | 2.72e-09 | 239 |
chondrosarcoma | 5.22e-08 | 1 |
extraosseous chondrosarcoma | 5.22e-08 | 1 |
myxoid chondrosarcoma | 5.22e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 5.22e-08 | 1 |
epithelioid sarcoma | 6.37e-08 | 1 |
peripheral primitive neuroectodermal tumor | 1.80e-07 | 1 |