FFCP PHASE1:Hg19::chr1:240726634..240726648,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:240726634..240726648,- | |||
|coexpression_cluster_id=C2107 | |coexpression_cluster_id=C2107 | ||
|description=CAGE_peak_at_chr1:240726634..240726648,- | |description=CAGE_peak_at_chr1:240726634..240726648,- | ||
|id=chr1:240726634..240726648,- | |id=chr1:240726634..240726648,- | ||
|ontology_enrichment_celltype=CL:0002620!4.08e-14!23;CL:0000057!1.83e-13!75 | |ontology_enrichment_celltype=CL:0002620!4.08e-14!23;CL:0000057!1.83e-13!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.95e-13;23!CL:0002580;2.98e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.07e-12,23;CL:0002580,3.67e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.38e-08!5;DOID:450!3.38e-08!5;DOID:66!3.38e-08!5;DOID:423!3.38e-08!5;DOID:0080000!3.38e-08!5;DOID:11722!3.38e-08!5 | |ontology_enrichment_disease=DOID:17!3.38e-08!5;DOID:450!3.38e-08!5;DOID:66!3.38e-08!5;DOID:423!3.38e-08!5;DOID:0080000!3.38e-08!5;DOID:11722!3.38e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:3369;2.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002780!4.94e-15!41;UBERON:0001890!4.94e-15!41;UBERON:0006240!4.94e-15!41;UBERON:0003080!1.66e-14!42;UBERON:0001049!6.51e-14!57;UBERON:0005068!6.51e-14!57;UBERON:0006241!6.51e-14!57;UBERON:0007135!6.51e-14!57;UBERON:0002616!3.72e-13!59;UBERON:0007023!1.17e-12!115;UBERON:0002020!3.27e-11!34;UBERON:0003528!3.27e-11!34;UBERON:0000955!8.07e-11!69;UBERON:0006238!8.07e-11!69;UBERON:0001869!9.71e-11!32;UBERON:0001017!2.49e-10!82;UBERON:0001893!7.96e-10!34;UBERON:0005743!1.91e-09!86;UBERON:0002619!2.69e-09!22;UBERON:0000073!3.50e-09!94;UBERON:0001016!3.50e-09!94;UBERON:0002791!3.55e-09!33;UBERON:0001950!3.76e-09!20;UBERON:0000153!7.39e-09!129;UBERON:0007811!7.39e-09!129;UBERON:0003056!1.26e-08!61;UBERON:0003075!1.73e-08!86;UBERON:0007284!1.73e-08!86;UBERON:0000475!3.47e-08!365;UBERON:0002097!5.17e-08!40;UBERON:0001894!5.74e-08!7;UBERON:0006222!5.74e-08!7;UBERON:0000033!6.89e-08!123;UBERON:0000956!8.41e-08!25;UBERON:0000203!8.41e-08!25;UBERON:0002346!9.43e-08!90;UBERON:0003296!1.03e-07!4;UBERON:0010133!1.03e-07!4;UBERON:0002199!1.83e-07!45;UBERON:0002416!1.83e-07!45 | |ontology_enrichment_uberon=UBERON:0002780!4.94e-15!41;UBERON:0001890!4.94e-15!41;UBERON:0006240!4.94e-15!41;UBERON:0003080!1.66e-14!42;UBERON:0001049!6.51e-14!57;UBERON:0005068!6.51e-14!57;UBERON:0006241!6.51e-14!57;UBERON:0007135!6.51e-14!57;UBERON:0002616!3.72e-13!59;UBERON:0007023!1.17e-12!115;UBERON:0002020!3.27e-11!34;UBERON:0003528!3.27e-11!34;UBERON:0000955!8.07e-11!69;UBERON:0006238!8.07e-11!69;UBERON:0001869!9.71e-11!32;UBERON:0001017!2.49e-10!82;UBERON:0001893!7.96e-10!34;UBERON:0005743!1.91e-09!86;UBERON:0002619!2.69e-09!22;UBERON:0000073!3.50e-09!94;UBERON:0001016!3.50e-09!94;UBERON:0002791!3.55e-09!33;UBERON:0001950!3.76e-09!20;UBERON:0000153!7.39e-09!129;UBERON:0007811!7.39e-09!129;UBERON:0003056!1.26e-08!61;UBERON:0003075!1.73e-08!86;UBERON:0007284!1.73e-08!86;UBERON:0000475!3.47e-08!365;UBERON:0002097!5.17e-08!40;UBERON:0001894!5.74e-08!7;UBERON:0006222!5.74e-08!7;UBERON:0000033!6.89e-08!123;UBERON:0000956!8.41e-08!25;UBERON:0000203!8.41e-08!25;UBERON:0002346!9.43e-08!90;UBERON:0003296!1.03e-07!4;UBERON:0010133!1.03e-07!4;UBERON:0002199!1.83e-07!45;UBERON:0002416!1.83e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;8.90e-25;4!UBERON:0010133;8.90e-25;4!UBERON:0001894;3.00e-14;7!UBERON:0001905;1.17e-13;2!UBERON:0002757;1.17e-13;2!UBERON:0010134;1.17e-13;2!UBERON:0005408;1.17e-13;2!UBERON:0001899;1.17e-13;2!UBERON:0000007;6.62e-13;2!UBERON:0002108;2.61e-11;4!UBERON:0002114;6.73e-09;2!UBERON:0002784;3.01e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.95e-25,4;UBERON:0010133,2.95e-25,4;UBERON:0001894,1.61e-14,7;UBERON:0006222,1.61e-14,7;UBERON:0001905,1.04e-13,2;UBERON:0002757,1.04e-13,2;UBERON:0010134,1.04e-13,2;UBERON:0005408,1.04e-13,2;UBERON:0001899,1.04e-13,2;UBERON:0000007,2.49e-13,2;UBERON:0002108,2.66e-11,4;UBERON:0002114,4.88e-09,2;UBERON:0002780,3.96e-08,41;UBERON:0001890,3.96e-08,41;UBERON:0003080,3.96e-08,41;UBERON:0006240,3.96e-08,41;UBERON:0002784,2.83e-07,4 | |||
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| ||
|short_description=p@chr1:240726634..240726648,- | |short_description=p@chr1:240726634..240726648,- | ||
}} | }} |
Latest revision as of 05:40, 28 July 2015
Short description: | p@chr1:240726634..240726648, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:240726634..240726648, - |
Coexpression cluster: | C2107_Fibroblast_Preadipocyte_mesenchymal_Chondrocyte_glioblastoma_Saos2_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.07e-12 | 23 |
preadipocyte of the breast | 3.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 2.95e-25 | 4 |
neuroendocrine gland | 2.95e-25 | 4 |
diencephalon | 1.61e-14 | 7 |
future diencephalon | 1.61e-14 | 7 |
pineal body | 1.04e-13 | 2 |
regional part of epithalamus | 1.04e-13 | 2 |
secretory circumventricular organ | 1.04e-13 | 2 |
circumventricular organ | 1.04e-13 | 2 |
epithalamus | 1.04e-13 | 2 |
pituitary gland | 2.49e-13 | 2 |
small intestine | 2.66e-11 | 4 |
duodenum | 4.88e-09 | 2 |
regional part of forebrain | 3.96e-08 | 41 |
forebrain | 3.96e-08 | 41 |
anterior neural tube | 3.96e-08 | 41 |
future forebrain | 3.96e-08 | 41 |
regional part of diencephalon | 2.83e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.21e-07 | 1 |