FFCP PHASE1:Hg19::chr1:22186101..22186129,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:22186101..22186129,- | |||
|coexpression_cluster_id=C547 | |||
|description=CAGE_peak_at_chr1:22186101..22186129,- | |description=CAGE_peak_at_chr1:22186101..22186129,- | ||
|id=chr1:22186101..22186129,- | |id=chr1:22186101..22186129,- | ||
|ontology_enrichment_celltype=CL:0000222!8.53e-18!119;CL:0000213!1.05e-15!57;CL:0000215!1.05e-15!57;CL:0002078!5.68e-14!44;CL:0000115!4.25e-13!35;CL:0002139!1.14e-12!24;CL:0000220!5.69e-10!246;CL:0002321!7.52e-10!248;CL:0000055!1.59e-09!180;CL:0000057!1.60e-09!75;CL:0000071!3.34e-09!18;CL:0002546!3.34e-09!18;CL:1000413!1.77e-07!9 | |ontology_enrichment_celltype=CL:0000222!8.53e-18!119;CL:0000213!1.05e-15!57;CL:0000215!1.05e-15!57;CL:0002078!5.68e-14!44;CL:0000115!4.25e-13!35;CL:0002139!1.14e-12!24;CL:0000220!5.69e-10!246;CL:0002321!7.52e-10!248;CL:0000055!1.59e-09!180;CL:0000057!1.60e-09!75;CL:0000071!3.34e-09!18;CL:0002546!3.34e-09!18;CL:1000413!1.77e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.18e-24;36!CL:0002139;7.33e-24;24!CL:0002078;3.68e-17;45!CL:0000071;9.38e-17;18!CL:1000413;1.19e-13;9!CL:0000213;5.37e-12;58!CL:0000215;5.37e-12;58!CL:0002544;4.15e-09;6!CL:0002138;8.28e-09;6!CL:0002188;3.35e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.14e-27,36;CL:0002078,7.94e-26,45;CL:0002139,6.50e-24,24;CL:0000213,2.74e-20,58;CL:0000215,2.74e-20,58;CL:0000071,8.41e-17,18;CL:0002546,8.41e-17,18;CL:0000222,1.70e-15,121;CL:1000413,1.01e-13,9;CL:0000057,1.15e-11,76;CL:0002544,3.24e-09,6;CL:0005020,8.24e-09,6;CL:0002138,8.24e-09,6;CL:0005022,8.24e-09,6;CL:0002188,2.19e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002546;9.38e-17;18!CL:0005022;8.28e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.23e-20!79;UBERON:0007798!4.23e-20!79;UBERON:0000055!6.46e-20!69;UBERON:0004872!2.94e-17!84;UBERON:0001981!2.45e-16!60;UBERON:0007500!2.45e-16!60;UBERON:0004537!2.45e-16!60;UBERON:0006965!2.45e-16!60;UBERON:0001009!6.28e-16!113;UBERON:0004535!3.29e-15!110;UBERON:0003914!5.79e-14!118;UBERON:0001637!6.79e-12!42;UBERON:0003509!6.79e-12!42;UBERON:0004572!6.79e-12!42;UBERON:0001986!3.34e-09!18;UBERON:0004638!3.34e-09!18;UBERON:0004852!3.34e-09!18;UBERON:0004573!4.49e-09!33;UBERON:0004571!4.49e-09!33;UBERON:0000468!5.16e-09!659;UBERON:0006914!2.66e-08!25;UBERON:0003915!1.77e-07!9;UBERON:0004700!1.77e-07!9;UBERON:0001917!1.77e-07!9;UBERON:0004111!2.38e-07!241;UBERON:0000490!5.47e-07!138;UBERON:0000487!5.82e-07!22;UBERON:0000477!6.01e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.38e-17;18!UBERON:0001986;9.38e-17;18!UBERON:0004852;9.38e-17;18!UBERON:0000055;5.46e-15;65!UBERON:0006914;2.10e-14;25!UBERON:0003915;1.19e-13;9!UBERON:0004700;1.19e-13;9!UBERON:0001917;1.19e-13;9!UBERON:0001637;4.73e-13;42!UBERON:0003509;4.73e-13;42!UBERON:0004572;4.73e-13;42!UBERON:0000487;7.10e-13;22!UBERON:0007500;3.62e-12;56!UBERON:0001981;3.62e-12;56!UBERON:0004537;3.62e-12;56!UBERON:0002049;1.75e-11;75!UBERON:0007798;1.75e-11;75!UBERON:0004573;1.47e-10;33!UBERON:0004571;1.47e-10;33!UBERON:0004457;3.60e-10;9!UBERON:0000042;3.60e-10;9!UBERON:0003914;1.22e-09;74!UBERON:0003688;5.40e-09;6!UBERON:0002358;5.40e-09;6!UBERON:0003684;5.40e-09;6!UBERON:0001178;5.40e-09;6!UBERON:0001473;9.56e-09;8!UBERON:0004536;9.56e-09;8!UBERON:0006558;9.56e-09;8!UBERON:0003513;2.15e-08;7!UBERON:0000490;1.66e-07;33!UBERON:0004535;3.30e-07;109!UBERON:0000947;8.15e-07;21!UBERON:0010191;8.15e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,7.47e-27,68;UBERON:0002049,5.39e-23,78;UBERON:0007798,5.39e-23,78;UBERON:0007500,6.34e-21,59;UBERON:0001981,6.34e-21,59;UBERON:0004537,6.34e-21,59;UBERON:0006965,6.34e-21,59;UBERON:0004872,3.10e-20,83;UBERON:0004535,2.03e-18,109;UBERON:0001009,1.54e-17,112;UBERON:0003914,4.09e-17,117;UBERON:0004638,8.41e-17,18;UBERON:0001986,8.41e-17,18;UBERON:0004852,8.41e-17,18;UBERON:0001637,4.38e-15,42;UBERON:0003509,4.38e-15,42;UBERON:0004572,4.38e-15,42;UBERON:0006914,1.67e-14,25;UBERON:0003915,1.01e-13,9;UBERON:0004700,1.01e-13,9;UBERON:0001917,1.01e-13,9;UBERON:0000487,6.51e-13,22;UBERON:0004573,6.57e-11,33;UBERON:0004571,6.57e-11,33;UBERON:0003688,6.73e-09,6;UBERON:0002358,6.73e-09,6;UBERON:0003684,6.73e-09,6;UBERON:0001178,6.73e-09,6;UBERON:0001473,9.19e-09,8;UBERON:0004536,9.19e-09,8;UBERON:0006558,9.19e-09,8;UBERON:0003513,2.41e-08,7;UBERON:0004457,3.48e-07,12;UBERON:0000042,3.48e-07,12;UBERON:0000926,3.68e-07,315;UBERON:0004120,3.68e-07,315;UBERON:0006603,3.68e-07,315;UBERON:0003081,4.92e-07,203;UBERON:0000947,7.92e-07,21;UBERON:0010191,7.92e-07,21;UBERON:0002465,9.72e-07,10 | |||
|phase1_expression=1.99846217197612,10.7050261945492,1.9733616573436,2.00146596706261,3.12872766099101,2.61701557230111,0,0,1.56711376919903,0.491467873003018,4.88460817580699,0.873765488520689,1.05506791291381,0,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.204000691244253,0.940364164434263,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,2.53007406669196,1.50401373190767,2.31754430337318,0,3.40644409211845,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,1.19257444420023,3.4409383804245,2.77712401286075,5.6530794192401,9.64848703282784,13.7559020970034,3.13492449805216,2.32575083252396,2.49036383880697,2.34304428935269,3.62546385398232,0,12.4471649349566,1.47065232138347,25.9245423322163,2.23249320710199,1.57170560838319,1.12611480483322,0,0.949265659568129,4.39684185432977,0,0,0.872188104285069,2.98183171017191,0.886413581652058,0.794455084879313,7.74458876021797,3.19201543978521,0,2.1349799145941,2.71334303258876,0,2.15537075311501,1.63461903113459,0.302714855289863,1.72852777344,0,0.936480230490962,0,0.448346041655403,0,0,0,0,0,0.309977343527296,0,2.22540236350701,0.910161361938026,3.59309070908119,0.168336113954066,0,0,0,1.5324389789951,0.300476117813194,0.226864366320042,4.84352016359927,2.13557388818567,2.11931901159562,3.60109315301283,0.618315175430633,2.06112432036503,1.11670113798954,1.18143432568886,0.876933046450788,3.5340728394176,1.01254888506529,1.13152239773168,6.03516307278244,1.0075209822764,0.67824236924195,0,0.545492241181669,0.286804595389004,0.243947412259191,0,0.580969714347592,0.518305275076852,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0.330881918197182,0,0,0.269662616320329,0.196221465125346,0.38474715694639,14.763109092493,5.60967095213783,0,1.47008711385542,0,0,0,0,0.245976877086227,0.171567810298526,0.768251997860379,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,2.30986316417718,1.38895653772983,4.37584550139576,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,1.53353071666084,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0.646358578788889,10.7296933755565,1.690605505112,0.797814349754612,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,0.428933980974443,1.08524321078289,0,0,1.06617584622764,0,0.602878754119172,0,2.29937879718731,0,0,0,0.718874566474748,2.29723871668228,0,0.289562613335158,1.43833425785268,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.542530047399471,3.32753378449291,3.03329280955175,0.788512075169673,0.585707074963566,0.601892199455438,0,0,0,0,0.434418072340414,0.195801157462741,1.02943027143257,0.206768026122887,0,0,0,1.66435439510497,1.20956117331872,3.47350930946288,1.84154367945675,9.5424432107245,2.56278298511402,2.04682899626681,4.66476371316462,2.96836132889982,0.771048469013278,0.887808626565635,0.0821271560138091,0.519254429183621,0.697262270759755,0.120859449591622,2.20557117333613,0.368323955743585,0.34444334449382,0.546273504020151,2.09799063935079,0.451199612907412,0.15403067420883,0,0,0.316654886678627,3.4120015221269,2.72149928442425,1.51141141271498,44.7259032801839,0.541892875087706,0.501689773854853,0,0,0.671624264166535,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.183138929636687,0.082509499920588,0.574265537996172,2.60024098414608,0,0.290012154876366,0.462145851343933,0.307007349452259,0.413509717453592,0.537101224341368,0.580066775656914,0.0852266274161009,0.445160178233687,0.826424576804891,0.384380134730212,0.127612712494584,0,0.464845549297286,6.92587163027408,0,2.15623506123262,0,0,1.29726953372744,0.143124886741991,0,0.316379424718726,0.762520775695299,0,0,0.636406495851874,4.70969184119538,0.179872457583315,0.54907405947211,0.235624804691373,0.202182481573316,4.75530963519025,0.842516912477962,0,3.89941583410055,1.05650146756755,0.409499734223957,1.27264888758341,2.26016233240486,0,7.29782872765342,3.94605796728386,0,0,0.608731130888112,2.16876448669825,0,0.143411352204052,0.0982490410131212,1.07001315444375,0,2.9555068941673,4.61012850143863,0,0.349934720244983,0,0.670302275535787,1.08890984861323,0,0,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0.423347165447766,0.324621940274555,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0.111308705022906,0,0,1.39473591775749,0.276283915531148,0,0.102268682502155,0,2.79935628895627,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0.21787692703798,0.41827123283581,0,0.227884111694002,0,0.08975764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| ||
|short_description=p@chr1:22186101..22186129,- | |short_description=p@chr1:22186101..22186129,- | ||
}} | }} |
Latest revision as of 04:10, 28 July 2015
Short description: | p@chr1:22186101..22186129, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22186101..22186129, - |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.14e-27 | 36 |
meso-epithelial cell | 7.94e-26 | 45 |
endothelial cell of vascular tree | 6.50e-24 | 24 |
lining cell | 2.74e-20 | 58 |
barrier cell | 2.74e-20 | 58 |
blood vessel endothelial cell | 8.41e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.41e-17 | 18 |
mesodermal cell | 1.70e-15 | 121 |
endothelial cell of artery | 1.01e-13 | 9 |
fibroblast | 1.15e-11 | 76 |
aortic endothelial cell | 3.24e-09 | 6 |
lymphangioblast | 8.24e-09 | 6 |
endothelial cell of lymphatic vessel | 8.24e-09 | 6 |
vascular lymphangioblast | 8.24e-09 | 6 |
glomerular endothelial cell | 2.19e-08 | 5 |