FFCP PHASE1:Hg19::chr1:209806472..209806488,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209806472..209806488,- | |||
|coexpression_cluster_id=C571 | |coexpression_cluster_id=C571 | ||
|description=CAGE_peak_at_chr1:209806472..209806488,- | |description=CAGE_peak_at_chr1:209806472..209806488,- | ||
|id=chr1:209806472..209806488,- | |id=chr1:209806472..209806488,- | ||
|ontology_enrichment_celltype=CL:0002076!6.18e-25!43;CL:0000066!1.34e-23!254;CL:0002368!3.24e-16!13;CL:0000223!9.88e-16!59;CL:0002159!1.19e-12!13;CL:0002202!6.27e-10!9;CL:0002632!6.27e-10!9;CL:0002251!5.68e-09!21;CL:0000063!3.33e-08!578;CL:0000244!3.77e-08!4;CL:0000731!3.77e-08!4;CL:0002077!2.67e-07!33;CL:0002328!6.63e-07!3 | |ontology_enrichment_celltype=CL:0002076!6.18e-25!43;CL:0000066!1.34e-23!254;CL:0002368!3.24e-16!13;CL:0000223!9.88e-16!59;CL:0002159!1.19e-12!13;CL:0002202!6.27e-10!9;CL:0002632!6.27e-10!9;CL:0002251!5.68e-09!21;CL:0000063!3.33e-08!578;CL:0000244!3.77e-08!4;CL:0000731!3.77e-08!4;CL:0002077!2.67e-07!33;CL:0002328!6.63e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.90e-33;13!CL:0002202;5.45e-24;9!CL:0002632;5.45e-24;9!CL:0002076;7.97e-23;42!CL:0002159;5.63e-19;14!CL:0000244;3.40e-18;4!CL:0000731;3.40e-18;4!CL:0002328;4.76e-15;3!CL:0000307;4.69e-14;3!CL:0002621;9.73e-14;3!CL:0000240;4.74e-12;6!CL:0000311;4.74e-12;6!CL:0000079;4.74e-12;6!CL:0000237;4.74e-12;6!CL:0002327;1.11e-10;4!CL:0002077;1.05e-09;34!CL:0000575;2.45e-09;2!CL:0000312;1.04e-08;5!CL:0000362;2.92e-08;9!CL:0000349;9.11e-08;19!CL:0002231;2.55e-07;3!CL:0002251;3.87e-07;20!CL:0002541;6.95e-07;3!CL:0002166;8.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.95e-33,13;CL:0002076,1.99e-30,42;CL:0002202,6.96e-24,9;CL:0002632,6.96e-24,9;CL:0000223,7.67e-21,58;CL:0002159,4.43e-19,14;CL:0000244,3.64e-18,4;CL:0000731,3.64e-18,4;CL:0000066,2.54e-17,253;CL:0002328,4.88e-15,3;CL:0000068,5.62e-14,3;CL:0000069,5.62e-14,3;CL:0000307,5.62e-14,3;CL:0000377,5.62e-14,3;CL:0002621,8.74e-14,3;CL:0000240,5.18e-12,6;CL:0000311,5.18e-12,6;CL:0000079,5.18e-12,6;CL:0000237,5.18e-12,6;CL:0000036,5.18e-12,6;CL:0000357,5.18e-12,6;CL:0000114,5.18e-12,6;CL:0002077,4.91e-11,34;CL:0002327,1.52e-10,4;CL:0000575,1.52e-09,2;CL:0000312,1.14e-08,5;CL:0000362,2.98e-08,9;CL:0000349,8.62e-08,19;CL:0002321,2.03e-07,250;CL:0002231,2.59e-07,3;CL:0002251,3.53e-07,20;CL:0002541,5.83e-07,3;CL:0002166,8.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;4.69e-14;3!CL:0000223;1.34e-12;58!CL:0000357;4.74e-12;6!CL:0000114;4.74e-12;6 | |||
|ontology_enrichment_disease=DOID:1749!1.77e-09!14;DOID:305!5.13e-07!106 | |ontology_enrichment_disease=DOID:1749!1.77e-09!14;DOID:305!5.13e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.63e-13!169;UBERON:0000925!4.63e-13!169;UBERON:0006595!4.63e-13!169;UBERON:0005631!7.90e-11!14;UBERON:0000158!7.90e-11!14;UBERON:0000365!2.67e-09!5;UBERON:0003124!1.25e-08!7;UBERON:0001004!3.80e-08!72;UBERON:0000065!1.14e-07!53;UBERON:0005910!1.22e-07!6;UBERON:0007196!2.34e-07!14;UBERON:0001558!2.34e-07!14;UBERON:0001007!4.41e-07!155;UBERON:0001555!4.41e-07!155;UBERON:0007026!4.41e-07!155;UBERON:0004815!6.63e-07!3;UBERON:0002031!6.63e-07!3 | |ontology_enrichment_uberon=UBERON:0004119!4.63e-13!169;UBERON:0000925!4.63e-13!169;UBERON:0006595!4.63e-13!169;UBERON:0005631!7.90e-11!14;UBERON:0000158!7.90e-11!14;UBERON:0000365!2.67e-09!5;UBERON:0003124!1.25e-08!7;UBERON:0001004!3.80e-08!72;UBERON:0000065!1.14e-07!53;UBERON:0005910!1.22e-07!6;UBERON:0007196!2.34e-07!14;UBERON:0001558!2.34e-07!14;UBERON:0001007!4.41e-07!155;UBERON:0001555!4.41e-07!155;UBERON:0007026!4.41e-07!155;UBERON:0004815!6.63e-07!3;UBERON:0002031!6.63e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.25e-17;12!UBERON:0004815;4.76e-15;3!UBERON:0002031;4.76e-15;3!UBERON:0000365;1.39e-14;5!UBERON:0007196;5.28e-14;15!UBERON:0001558;5.28e-14;15!UBERON:0001949;9.73e-14;3!UBERON:0005910;3.60e-12;6!UBERON:0005631;1.06e-10;10!UBERON:0000158;1.06e-10;10!UBERON:0001911;1.11e-10;4!UBERON:0005911;4.80e-10;36!UBERON:0002185;3.37e-09;5!UBERON:0004807;3.87e-09;22!UBERON:0000478;4.40e-08;24!UBERON:0003729;4.62e-08;13!UBERON:0005178;2.85e-07;34!UBERON:0002224;2.85e-07;34!UBERON:0003124;6.95e-07;3!UBERON:0000920;6.95e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.88e-15,3;UBERON:0002031,4.88e-15,3;UBERON:0000365,1.47e-14,5;UBERON:0007196,6.09e-14,15;UBERON:0001558,6.09e-14,15;UBERON:0001949,8.74e-14,3;UBERON:0005910,3.77e-12,6;UBERON:0005631,8.51e-11,14;UBERON:0000158,8.51e-11,14;UBERON:0001911,1.52e-10,4;UBERON:0005333,1.52e-10,4;UBERON:0008425,1.52e-10,4;UBERON:0005311,1.52e-10,4;UBERON:0005157,2.11e-09,47;UBERON:0004119,2.54e-09,160;UBERON:0000925,2.54e-09,160;UBERON:0006595,2.54e-09,160;UBERON:0002185,3.42e-09,5;UBERON:0001004,8.27e-09,74;UBERON:0005153,2.02e-08,37;UBERON:0000478,4.33e-08,24;UBERON:0003729,4.45e-08,13;UBERON:0003102,9.50e-08,99;UBERON:0005178,3.22e-07,34;UBERON:0002224,3.22e-07,34;UBERON:0005181,5.62e-07,35;UBERON:0004807,5.70e-07,28;UBERON:0000920,5.83e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,1.22866968250754,0.697801167972428,0.655324116390517,1.05506791291381,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59710612239464,5.4217065380085,14.0506523863379,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0.689491361473237,0,0,0,0,0,1.53041946185451,0,1.27867425159808,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0,1.45718115317017,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70565194428616,2.72746120590835,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330881918197182,0,0.237270619111097,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,0,0.368965315629341,0,2.63400684980701,2.24803506515239,3.71957197923034,1.29623823221941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,3.19166043577833,1.41775097242386,2.14940454486836,1.16253575405585,6.9008882249738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,3.32870879020994,0.604780586659361,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,7.81975234182811,4.05156351317944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0.082509499920588,0.574265537996172,3.90036147621913,0,0,0,0,0,0,0,0,0,4.95854746082934,7.11103249250893,0.765676274967505,2.93357564481095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,2.68120910214315,5.44454924306613,0,3.01353760869861,1.68471475667626,3.54744122829341,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3874448473769,0,1.84296421259539,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,2.87101043758728,0.0915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0.661983911750998,0,0,0,0,0.520679215005393,0.195984794828755,0.174118413160805,0,0,0.290268993867255,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0,0.411125773940253,0,0,0.195551382734803,0,0,0.19980960958213,0.576361668616424,0,0,0.14405479798815,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,1.11903606175556,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,1.28400018965175,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0.401206833445841,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.435433495793923,0,0,0.286888821570705,0,0.325613074443898,0,0,0,2.34640942403454,0,0,0,0,0 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| ||
|short_description=p@chr1:209806472..209806488,- | |short_description=p@chr1:209806472..209806488,- | ||
}} | }} |
Latest revision as of 03:20, 28 July 2015
Short description: | p@chr1:209806472..209806488, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209806472..209806488, - |
Coexpression cluster: | C571_Bronchial_Prostate_Small_Tracheal_Mallassezderived_Urothelial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.88e-15 | 3 |
epithelium of bronchus | 4.88e-15 | 3 |
urothelium | 1.47e-14 | 5 |
tracheobronchial tree | 6.09e-14 | 15 |
lower respiratory tract | 6.09e-14 | 15 |
gingival epithelium | 8.74e-14 | 3 |
transitional epithelium | 3.77e-12 | 6 |
extraembryonic membrane | 8.51e-11 | 14 |
membranous layer | 8.51e-11 | 14 |
mammary gland | 1.52e-10 | 4 |
mammary bud | 1.52e-10 | 4 |
mammary ridge | 1.52e-10 | 4 |
mammary placode | 1.52e-10 | 4 |
epithelial fold | 2.11e-09 | 47 |
endoderm-derived structure | 2.54e-09 | 160 |
endoderm | 2.54e-09 | 160 |
presumptive endoderm | 2.54e-09 | 160 |
bronchus | 3.42e-09 | 5 |
respiratory system | 8.27e-09 | 74 |
epithelial bud | 2.02e-08 | 37 |
extraembryonic structure | 4.33e-08 | 24 |
mouth mucosa | 4.45e-08 | 13 |
surface structure | 9.50e-08 | 99 |
thoracic cavity element | 3.22e-07 | 34 |
thoracic cavity | 3.22e-07 | 34 |
thoracic segment organ | 5.62e-07 | 35 |
respiratory system epithelium | 5.70e-07 | 28 |
egg chorion | 5.83e-07 | 3 |