FFCP PHASE1:Hg19::chr1:209790813..209790826,-: Difference between revisions
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|id=chr1:209790813..209790826,-
|short_description=p@chr1:209790813..209790826,-
|description=CAGE_peak_at_chr1:209790813..209790826,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:209790813..209790826,- | |||
|coexpression_cluster_id=C571 | |||
|description=CAGE_peak_at_chr1:209790813..209790826,- | |||
|id=chr1:209790813..209790826,- | |||
|ontology_enrichment_celltype=CL:0000066!1.33e-26!254;CL:0002076!6.52e-26!43;CL:0000223!7.58e-19!59;CL:0002368!3.22e-13!13;CL:0000063!3.04e-11!578;CL:0002251!3.28e-09!21;CL:0002202!1.47e-08!9;CL:0002632!1.47e-08!9;CL:0002159!1.77e-07!13;CL:0000860!9.40e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002368;9.74e-24;13!CL:0002076;2.36e-18;42!CL:0000244;3.87e-14;4!CL:0000731;3.87e-14;4!CL:0002159;4.57e-14;14!CL:0002202;1.12e-12;9!CL:0002632;1.12e-12;9!CL:0000307;1.24e-10;3!CL:0002328;1.80e-10;3!CL:0002621;1.83e-10;3!CL:0000349;2.83e-09;19!CL:0002077;4.02e-08;34!CL:0002327;5.15e-08;4!CL:0000575;1.99e-07;2!CL:0002536;3.46e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,8.37e-24,13;CL:0002076,2.02e-23,42;CL:0000066,1.78e-22,253;CL:0000223,1.41e-15,58;CL:0000244,4.15e-14,4;CL:0000731,4.15e-14,4;CL:0002159,4.62e-14,14;CL:0002202,9.46e-13,9;CL:0002632,9.46e-13,9;CL:0000068,1.08e-10,3;CL:0000069,1.08e-10,3;CL:0000307,1.08e-10,3;CL:0000377,1.08e-10,3;CL:0002328,1.59e-10,3;CL:0002621,1.64e-10,3;CL:0002077,2.32e-09,34;CL:0000349,2.79e-09,19;CL:0002327,4.22e-08,4;CL:0002536,2.02e-07,2;CL:0000575,2.02e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;1.24e-10;3!CL:0000223;1.67e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.57e-13!106;DOID:0050687!1.31e-10!143;DOID:1749!6.15e-10!14;DOID:299!4.16e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.85e-10!14;UBERON:0000158!1.85e-10!14;UBERON:0004119!8.61e-10!169;UBERON:0000925!8.61e-10!169;UBERON:0006595!8.61e-10!169;UBERON:0000062!1.54e-08!511;UBERON:0003124!1.37e-07!7;UBERON:0005910!1.85e-07!6;UBERON:0000365!4.08e-07!5;UBERON:0001004!6.57e-07!72;UBERON:0000065!9.51e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;7.26e-13;12!UBERON:0000365;2.63e-11;5!UBERON:0005631;8.67e-11;10!UBERON:0000158;8.67e-11;10!UBERON:0004815;1.80e-10;3!UBERON:0002031;1.80e-10;3!UBERON:0001949;1.83e-10;3!UBERON:0005910;2.05e-09;6!UBERON:0001911;5.15e-08;4!UBERON:0000305;1.71e-07;7!UBERON:0007196;2.63e-07;15!UBERON:0001558;2.63e-07;15!UBERON:0000478;4.58e-07;24!UBERON:0005911;5.13e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.37e-13,14;UBERON:0000158,4.37e-13,14;UBERON:0000365,2.77e-11,5;UBERON:0004815,1.59e-10,3;UBERON:0002031,1.59e-10,3;UBERON:0001949,1.64e-10,3;UBERON:0005910,2.14e-09,6;UBERON:0001911,4.22e-08,4;UBERON:0005333,4.22e-08,4;UBERON:0008425,4.22e-08,4;UBERON:0005311,4.22e-08,4;UBERON:0000305,1.25e-07,7;UBERON:0007196,2.38e-07,15;UBERON:0001558,2.38e-07,15;UBERON:0004119,4.28e-07,160;UBERON:0000925,4.28e-07,160;UBERON:0006595,4.28e-07,160;UBERON:0003124,4.52e-07,7;UBERON:0000478,4.52e-07,24 | |||
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| ||
|short_description=p@chr1:209790813..209790826,- | |||
}} | }} |
Latest revision as of 03:19, 28 July 2015
Short description: | p@chr1:209790813..209790826, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209790813..209790826, - |
Coexpression cluster: | C571_Bronchial_Prostate_Small_Tracheal_Mallassezderived_Urothelial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 8.37e-24 | 13 |
endo-epithelial cell | 2.02e-23 | 42 |
epithelial cell | 1.78e-22 | 253 |
endodermal cell | 1.41e-15 | 58 |
transitional epithelial cell | 4.15e-14 | 4 |
urothelial cell | 4.15e-14 | 4 |
general ecto-epithelial cell | 4.62e-14 | 14 |
epithelial cell of tracheobronchial tree | 9.46e-13 | 9 |
epithelial cell of lower respiratory tract | 9.46e-13 | 9 |
duct epithelial cell | 1.08e-10 | 3 |
branched duct epithelial cell | 1.08e-10 | 3 |
tracheal epithelial cell | 1.08e-10 | 3 |
tracheoblast | 1.08e-10 | 3 |
bronchial epithelial cell | 1.59e-10 | 3 |
gingival epithelial cell | 1.64e-10 | 3 |
ecto-epithelial cell | 2.32e-09 | 34 |
extraembryonic cell | 2.79e-09 | 19 |
mammary gland epithelial cell | 4.22e-08 | 4 |
amniotic epithelial cell | 2.02e-07 | 2 |
corneal epithelial cell | 2.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.37e-13 | 14 |
membranous layer | 4.37e-13 | 14 |
urothelium | 2.77e-11 | 5 |
lower respiratory tract epithelium | 1.59e-10 | 3 |
epithelium of bronchus | 1.59e-10 | 3 |
gingival epithelium | 1.64e-10 | 3 |
transitional epithelium | 2.14e-09 | 6 |
mammary gland | 4.22e-08 | 4 |
mammary bud | 4.22e-08 | 4 |
mammary ridge | 4.22e-08 | 4 |
mammary placode | 4.22e-08 | 4 |
amnion | 1.25e-07 | 7 |
tracheobronchial tree | 2.38e-07 | 15 |
lower respiratory tract | 2.38e-07 | 15 |
endoderm-derived structure | 4.28e-07 | 160 |
endoderm | 4.28e-07 | 160 |
presumptive endoderm | 4.28e-07 | 160 |
chorion | 4.52e-07 | 7 |
extraembryonic structure | 4.52e-07 | 24 |