FFCP PHASE1:Hg19::chr1:198636258..198636278,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:198636258..198636278,- to FFCP PHASE1:Hg19::chr1:198636258..198636278,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000413577_5end | |||
|cluster_id=chr1:198636258..198636278,- | |||
|coexpression_cluster_id=C3918 | |||
|description=CAGE_peak_1_at_ENST00000413577_5end | |||
|id=chr1:198636258..198636278,- | |||
|ontology_enrichment_celltype=CL:0002620!1.85e-43!23;CL:0000057!2.20e-30!75;CL:0002334!7.88e-18!12;CL:0000055!2.10e-16!180;CL:0002580!1.06e-14!3;CL:0002579!4.26e-07!3;CL:0000219!5.82e-07!390;CL:0000135!6.93e-07!3;CL:0000386!6.93e-07!3;CL:0000388!6.93e-07!3;CL:0000134!8.20e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.68e-61;23!CL:0002580;2.32e-22;3!CL:0002334;4.25e-15;12!CL:0000057;4.70e-13;73!CL:0000222;5.70e-09;1!CL:0002581;2.06e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.44e-61,23;CL:0000057,2.63e-35,76;CL:0002580,2.15e-22,3;CL:0002334,4.13e-15,12;CL:0002581,2.06e-08,1;CL:0000219,8.10e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.35e-24!5;DOID:450!9.35e-24!5;DOID:66!9.35e-24!5;DOID:423!9.35e-24!5;DOID:0080000!9.35e-24!5;DOID:11722!9.35e-24!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.15e-36;5!DOID:450;1.15e-36;5!DOID:66;1.15e-36;5!DOID:423;1.15e-36;5!DOID:0080000;1.15e-36;5!DOID:11722;1.15e-36;5!DOID:3371;1.32e-08;1!DOID:4549;1.32e-08;1!DOID:5861;1.32e-08;1!DOID:6496;1.32e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.51e-37,5;DOID:450,8.51e-37,5;DOID:66,8.51e-37,5;DOID:423,8.51e-37,5;DOID:0080000,8.51e-37,5;DOID:11722,8.51e-37,5;DOID:3371,1.65e-08,1;DOID:4549,1.65e-08,1;DOID:5861,1.65e-08,1;DOID:6496,1.65e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!8.10e-27!40;UBERON:0002199!2.03e-23!45;UBERON:0002416!2.03e-23!45;UBERON:0005406!5.33e-10!2;UBERON:0003102!3.53e-09!95;UBERON:0000043!6.93e-07!3;UBERON:0002384!7.31e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.22e-25;41!UBERON:0002199;7.22e-20;46!UBERON:0002416;7.22e-20;46!UBERON:0003102;1.12e-14;50!UBERON:0000310;4.41e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.13e-33,41;UBERON:0002199,3.12e-29,46;UBERON:0002416,3.12e-29,46;UBERON:0003102,3.43e-12,99;UBERON:0000310,4.32e-07,10 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.660326319776,3.63047560991565,2.7551147150743,1.80054657650641,4.01904864029912,13.1396675423271,11.1670113798954,2.36286865137773,31.861900687712,5.55354303337052,2.02509777013059,0.323292113637624,5.68015348026583,28.3113396019669,5.93462073086707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0.892144943985809,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,2.23297027036899,2.76231551918512,2.24528075546459,0.256278298511402,12.2809739776009,0,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11814704059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7345655053978,31.694662432637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74853647927928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,6.30924491143255,0,0,0,0,0,0,0,0.926404341482917,2.41212454536578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.288292572803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.660326319776,3.63047560991565,2.7551147150743,1.80054657650641,4.01904864029912,13.1396675423271,11.1670113798954,2.36286865137773,31.861900687712,5.55354303337052,2.02509777013059,0.323292113637624,5.68015348026583,28.3113396019669,5.93462073086707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0.892144943985809,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,2.23297027036899,2.76231551918512,2.24528075546459,0.256278298511402,12.2809739776009,0,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11814704059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7345655053978,31.694662432637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74853647927928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,6.30924491143255,0,0,0,0,0,0,0,0.926404341482917,2.41212454536578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.288292572803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000413577 | |||
}} | }} |
Latest revision as of 01:56, 28 July 2015
Short description: | p1@ENST00000413577 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000413577_5end |
Coexpression cluster: | C3918_glioblastoma_Fibroblast_Preadipocyte_liposarcoma_mesodermal_extraskeletal_osteoclastoma |
Association with transcript: | -68bp_to_ENST00000413577_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.44e-61 | 23 |
fibroblast | 2.63e-35 | 76 |
preadipocyte of the breast | 2.15e-22 | 3 |
preadipocyte | 4.13e-15 | 12 |
perirenal preadipocyte | 2.06e-08 | 1 |
motile cell | 8.10e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.13e-33 | 41 |
integument | 3.12e-29 | 46 |
integumental system | 3.12e-29 | 46 |
surface structure | 3.43e-12 | 99 |
breast | 4.32e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.51e-37 | 5 |
myotonic disease | 8.51e-37 | 5 |
muscle tissue disease | 8.51e-37 | 5 |
myopathy | 8.51e-37 | 5 |
muscular disease | 8.51e-37 | 5 |
myotonic dystrophy | 8.51e-37 | 5 |
chondrosarcoma | 1.65e-08 | 1 |
extraosseous chondrosarcoma | 1.65e-08 | 1 |
myxoid chondrosarcoma | 1.65e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 1.65e-08 | 1 |