FFCP PHASE1:Hg19::chr1:187997086..187997109,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:187997086..187997109,+ | |||
|description=CAGE_peak_at_chr1:187997086..187997109,+ | |description=CAGE_peak_at_chr1:187997086..187997109,+ | ||
|id=chr1:187997086..187997109,+ | |id=chr1:187997086..187997109,+ | ||
|ontology_enrichment_celltype=CL:0002139!7.56e-35!24;CL:0000071!1.57e-33!18;CL:0002546!1.57e-33!18;CL:0000115!3.34e-31!35;CL:0002078!5.22e-26!44;CL:0000213!1.33e-22!57;CL:0000215!1.33e-22!57;CL:0002543!1.70e-17!6;CL:1000413!4.91e-15!9;CL:0000222!3.67e-13!119;CL:0000076!7.00e-12!62;CL:0002618!6.82e-10!3;CL:0000708!3.90e-08!3;CL:0002544!5.51e-08!6;CL:0000066!2.86e-07!254 | |ontology_enrichment_celltype=CL:0002139!7.56e-35!24;CL:0000071!1.57e-33!18;CL:0002546!1.57e-33!18;CL:0000115!3.34e-31!35;CL:0002078!5.22e-26!44;CL:0000213!1.33e-22!57;CL:0000215!1.33e-22!57;CL:0002543!1.70e-17!6;CL:1000413!4.91e-15!9;CL:0000222!3.67e-13!119;CL:0000076!7.00e-12!62;CL:0002618!6.82e-10!3;CL:0000708!3.90e-08!3;CL:0002544!5.51e-08!6;CL:0000066!2.86e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000071;1.94e-51;18!CL:0002139;2.96e-38;24!CL:0000115;8.82e-33;36!CL:0002618;2.17e-29;3!CL:0002543;1.20e-25;6!CL:0002078;3.37e-22;45!CL:1000413;3.96e-17;9!CL:0000213;4.31e-14;58!CL:0000215;4.31e-14;58!CL:0002144;4.57e-14;3!CL:0000076;3.44e-12;63!CL:0002188;1.30e-08;5!CL:0002544;2.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.24e-51,18;CL:0002546,1.24e-51,18;CL:0000115,8.84e-43,36;CL:0002139,2.11e-38,24;CL:0002078,7.75e-34,45;CL:0002618,1.34e-29,3;CL:0002543,6.76e-26,6;CL:0000213,8.25e-26,58;CL:0000215,8.25e-26,58;CL:1000413,4.31e-17,9;CL:0000076,1.12e-16,63;CL:0002144,4.15e-14,3;CL:0000222,2.69e-11,121;CL:0000066,9.48e-11,253;CL:0002188,1.60e-08,5;CL:0002544,2.37e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.94e-51;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;1.10e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.46e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.57e-33!18;UBERON:0004638!1.57e-33!18;UBERON:0004852!1.57e-33!18;UBERON:0000487!3.30e-30!22;UBERON:0006914!4.90e-26!25;UBERON:0001638!4.51e-15!9;UBERON:0003920!4.51e-15!9;UBERON:0004582!4.51e-15!9;UBERON:0003915!4.91e-15!9;UBERON:0004700!4.91e-15!9;UBERON:0001917!4.91e-15!9;UBERON:0000055!4.10e-14!69;UBERON:0002049!9.25e-13!79;UBERON:0007798!9.25e-13!79;UBERON:0001981!2.42e-12!60;UBERON:0007500!2.42e-12!60;UBERON:0004537!2.42e-12!60;UBERON:0006965!2.42e-12!60;UBERON:0003914!5.36e-11!118;UBERON:0002066!1.10e-09!5;UBERON:0000025!8.24e-09!194;UBERON:0002240!1.45e-08!3;UBERON:0000119!1.79e-08!312;UBERON:0000490!2.29e-08!138;UBERON:0004872!2.31e-08!84;UBERON:0004535!2.40e-08!110;UBERON:0003210!3.90e-08!3;UBERON:0001009!5.68e-08!113;UBERON:0004111!8.53e-08!241;UBERON:0000483!5.62e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.94e-51;18!UBERON:0001986;1.94e-51;18!UBERON:0004852;1.94e-51;18!UBERON:0000487;7.48e-42;22!UBERON:0006914;1.13e-36;25!UBERON:0000490;9.97e-29;33!UBERON:0002066;6.63e-18;5!UBERON:0001638;3.34e-17;9!UBERON:0003920;3.34e-17;9!UBERON:0004582;3.34e-17;9!UBERON:0003915;3.96e-17;9!UBERON:0004700;3.96e-17;9!UBERON:0001917;3.96e-17;9!UBERON:0010523;4.57e-14;3!UBERON:0001915;4.57e-14;3!UBERON:0001982;4.57e-14;3!UBERON:0007500;4.65e-11;56!UBERON:0001981;4.65e-11;56!UBERON:0004537;4.65e-11;56!UBERON:0010260;3.36e-10;9!UBERON:0000025;1.52e-09;93!UBERON:0000055;2.95e-09;65!UBERON:0003914;1.92e-08;74!UBERON:0000119;2.67e-07;139!UBERON:0000483;4.34e-07;136!UBERON:0002049;6.02e-07;75!UBERON:0007798;6.02e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.24e-51,18;UBERON:0001986,1.24e-51,18;UBERON:0004852,1.24e-51,18;UBERON:0000487,5.19e-42,22;UBERON:0006914,8.20e-37,25;UBERON:0002066,4.98e-18,5;UBERON:0007500,5.27e-18,59;UBERON:0001981,5.27e-18,59;UBERON:0004537,5.27e-18,59;UBERON:0006965,5.27e-18,59;UBERON:0001638,2.29e-17,9;UBERON:0003920,2.29e-17,9;UBERON:0004582,2.29e-17,9;UBERON:0003915,4.31e-17,9;UBERON:0004700,4.31e-17,9;UBERON:0001917,4.31e-17,9;UBERON:0000055,2.12e-15,68;UBERON:0010523,4.15e-14,3;UBERON:0001915,4.15e-14,3;UBERON:0001982,4.15e-14,3;UBERON:0002049,3.28e-13,78;UBERON:0007798,3.28e-13,78;UBERON:0004872,2.59e-12,83;UBERON:0003914,9.37e-12,117;UBERON:0000490,2.31e-10,148;UBERON:0010260,2.87e-10,9;UBERON:0004535,5.72e-09,109;UBERON:0000025,1.03e-08,192;UBERON:0001009,1.11e-08,112;UBERON:0000483,3.11e-07,306;UBERON:0000119,3.91e-07,309 | |||
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| ||
|short_description=p@chr1:187997086..187997109,+ | |short_description=p@chr1:187997086..187997109,+ | ||
}} | }} |
Latest revision as of 01:34, 28 July 2015
Short description: | p@chr1:187997086..187997109, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:187997086..187997109, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.24e-51 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.24e-51 | 18 |
endothelial cell | 8.84e-43 | 36 |
endothelial cell of vascular tree | 2.11e-38 | 24 |
meso-epithelial cell | 7.75e-34 | 45 |
endothelial cell of umbilical vein | 1.34e-29 | 3 |
vein endothelial cell | 6.76e-26 | 6 |
lining cell | 8.25e-26 | 58 |
barrier cell | 8.25e-26 | 58 |
endothelial cell of artery | 4.31e-17 | 9 |
squamous epithelial cell | 1.12e-16 | 63 |
capillary endothelial cell | 4.15e-14 | 3 |
mesodermal cell | 2.69e-11 | 121 |
epithelial cell | 9.48e-11 | 253 |
glomerular endothelial cell | 1.60e-08 | 5 |
aortic endothelial cell | 2.37e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.24e-51 | 18 |
endothelium | 1.24e-51 | 18 |
cardiovascular system endothelium | 1.24e-51 | 18 |
simple squamous epithelium | 5.19e-42 | 22 |
squamous epithelium | 8.20e-37 | 25 |
umbilical vein | 4.98e-18 | 5 |
epithelial tube open at both ends | 5.27e-18 | 59 |
blood vessel | 5.27e-18 | 59 |
blood vasculature | 5.27e-18 | 59 |
vascular cord | 5.27e-18 | 59 |
vein | 2.29e-17 | 9 |
venous blood vessel | 2.29e-17 | 9 |
venous system | 2.29e-17 | 9 |
endothelial tube | 4.31e-17 | 9 |
arterial system endothelium | 4.31e-17 | 9 |
endothelium of artery | 4.31e-17 | 9 |
vessel | 2.12e-15 | 68 |
microcirculatory vessel | 4.15e-14 | 3 |
endothelium of capillary | 4.15e-14 | 3 |
capillary | 4.15e-14 | 3 |
vasculature | 3.28e-13 | 78 |
vascular system | 3.28e-13 | 78 |
splanchnic layer of lateral plate mesoderm | 2.59e-12 | 83 |
epithelial tube | 9.37e-12 | 117 |
unilaminar epithelium | 2.31e-10 | 148 |
umbilical blood vessel | 2.87e-10 | 9 |
cardiovascular system | 5.72e-09 | 109 |
tube | 1.03e-08 | 192 |
circulatory system | 1.11e-08 | 112 |
epithelium | 3.11e-07 | 306 |
cell layer | 3.91e-07 | 309 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.46e-10 | 1 |