FFCP PHASE1:Hg19::chr1:16343563..16343579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:16343563..16343579,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr1:16343563..16343579,+ | |description=CAGE_peak_at_chr1:16343563..16343579,+ | ||
|id=chr1:16343563..16343579,+ | |id=chr1:16343563..16343579,+ | ||
|ontology_enrichment_celltype=CL:0000136!5.06e-10!15;CL:0002334!1.44e-07!12;CL:0002580!1.88e-07!3;CL:0000135!2.14e-07!3;CL:0000386!2.14e-07!3;CL:0000388!2.14e-07!3;CL:0002615!8.08e-07!3;CL:0002579!8.08e-07!3 | |ontology_enrichment_celltype=CL:0000136!5.06e-10!15;CL:0002334!1.44e-07!12;CL:0002580!1.88e-07!3;CL:0000135!2.14e-07!3;CL:0000386!2.14e-07!3;CL:0000388!2.14e-07!3;CL:0002615!8.08e-07!3;CL:0002579!8.08e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002617;1.00e-15;2!CL:0000135;2.74e-10;3!CL:0002580;2.74e-10;3!CL:0000388;2.74e-10;3!CL:0002570;1.03e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,1.08e-15,2;CL:0000136,7.98e-12,15;CL:0002580,1.97e-10,3;CL:0000135,2.49e-10,3;CL:0000388,2.49e-10,3;CL:0002570,9.52e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0010227;7.01e-09;1!UBERON:0010226;7.01e-09;1!UBERON:0004140;1.23e-08;1!UBERON:0004874;2.46e-08;1!UBERON:0005062;4.46e-08;4!UBERON:0007284;4.46e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;3.30e-16;2!DOID:178;6.02e-09;1!DOID:326;6.02e-09;1!DOID:3978;6.02e-09;1!DOID:3394;6.02e-09;1!DOID:5844;6.02e-09;1!DOID:1287;1.53e-08;4!DOID:3369;2.46e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.30e-16,2;DOID:178,6.03e-09,1;DOID:326,6.03e-09,1;DOID:3978,6.03e-09,1;DOID:3394,6.03e-09,1;DOID:5844,6.03e-09,1;DOID:1287,1.53e-08,4;DOID:3369,2.29e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.39e-12!6;UBERON:0002358!5.39e-12!6;UBERON:0003684!5.39e-12!6;UBERON:0001178!5.39e-12!6;UBERON:0004457!8.92e-10!12;UBERON:0000042!8.92e-10!12;UBERON:0007100!5.77e-09!27;UBERON:0001443!6.49e-09!11;UBERON:0004151!1.21e-07!3;UBERON:0003978!1.70e-07!3;UBERON:0009751!1.70e-07!3;UBERON:0000946!1.70e-07!3;UBERON:0002523!1.70e-07!3;UBERON:0005983!1.70e-07!3;UBERON:0002165!1.70e-07!3;UBERON:0002062!1.70e-07!3;UBERON:0007280!1.70e-07!3;UBERON:0000043!2.14e-07!3;UBERON:0000310!2.92e-07!10 | |ontology_enrichment_uberon=UBERON:0003688!5.39e-12!6;UBERON:0002358!5.39e-12!6;UBERON:0003684!5.39e-12!6;UBERON:0001178!5.39e-12!6;UBERON:0004457!8.92e-10!12;UBERON:0000042!8.92e-10!12;UBERON:0007100!5.77e-09!27;UBERON:0001443!6.49e-09!11;UBERON:0004151!1.21e-07!3;UBERON:0003978!1.70e-07!3;UBERON:0009751!1.70e-07!3;UBERON:0000946!1.70e-07!3;UBERON:0002523!1.70e-07!3;UBERON:0005983!1.70e-07!3;UBERON:0002165!1.70e-07!3;UBERON:0002062!1.70e-07!3;UBERON:0007280!1.70e-07!3;UBERON:0000043!2.14e-07!3;UBERON:0000310!2.92e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.17e-17;25!UBERON:0001443;2.76e-16;11!UBERON:0005090;5.76e-16;2!UBERON:0001630;5.76e-16;2!UBERON:0000310;1.08e-11;10!UBERON:0004151;5.31e-11;3!UBERON:0003978;1.74e-10;3!UBERON:0000946;1.74e-10;3!UBERON:0007846;2.74e-10;3!UBERON:0000043;2.74e-10;3!UBERON:0007845;2.74e-10;3!UBERON:0002084;7.01e-09;1!UBERON:0002079;7.01e-09;1!UBERON:0001389;7.01e-09;1!UBERON:0000026;7.01e-09;1!UBERON:0008784;7.01e-09;1!UBERON:0006058;7.01e-09;1!UBERON:0003663;7.01e-09;1!UBERON:0004256;7.01e-09;1!UBERON:0002082;7.01e-09;1!UBERON:0004708;7.01e-09;1!UBERON:0002101;7.01e-09;1!UBERON:0004709;7.01e-09;1!UBERON:0002529;7.01e-09;1!UBERON:0010538;7.01e-09;1!UBERON:0003661;7.01e-09;1!UBERON:0010890;7.01e-09;1!UBERON:0002471;7.01e-09;1!UBERON:0001383;7.01e-09;1!UBERON:0010758;7.01e-09;1!UBERON:0010707;7.01e-09;1!UBERON:0000978;7.01e-09;1!UBERON:0002103;7.01e-09;1!UBERON:0001665;7.01e-09;1!UBERON:0003823;7.01e-09;1!UBERON:0000154;7.01e-09;1!UBERON:0010709;7.01e-09;1!UBERON:0002426;8.45e-09;1!UBERON:0003831;8.45e-09;1!UBERON:0003898;8.45e-09;1!UBERON:0004830;8.45e-09;1!UBERON:0003830;8.45e-09;1!UBERON:0005175;8.45e-09;1!UBERON:0001774;8.45e-09;1!UBERON:0001103;8.45e-09;1!UBERON:0002146;1.23e-08;1!UBERON:0005623;1.23e-08;1!UBERON:0000989;2.46e-08;1!UBERON:0002135;2.46e-08;1!UBERON:0008811;2.46e-08;1!UBERON:0000948;3.81e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001443,2.32e-16,11;UBERON:0007100,2.83e-16,27;UBERON:0005090,5.56e-16,2;UBERON:0001630,5.56e-16,2;UBERON:0000310,9.13e-12,10;UBERON:0004151,5.59e-11,3;UBERON:0003978,1.22e-10,3;UBERON:0009751,1.22e-10,3;UBERON:0000946,1.22e-10,3;UBERON:0002523,1.22e-10,3;UBERON:0005983,1.22e-10,3;UBERON:0002165,1.22e-10,3;UBERON:0002062,1.22e-10,3;UBERON:0007280,1.22e-10,3;UBERON:0007846,2.49e-10,3;UBERON:0000043,2.49e-10,3;UBERON:0007845,2.49e-10,3;UBERON:0005418,6.50e-09,1;UBERON:0001389,6.50e-09,1;UBERON:0000026,6.50e-09,1;UBERON:0008784,6.50e-09,1;UBERON:0006058,6.50e-09,1;UBERON:0003663,6.50e-09,1;UBERON:0004256,6.50e-09,1;UBERON:0004708,6.50e-09,1;UBERON:0002101,6.50e-09,1;UBERON:0004709,6.50e-09,1;UBERON:0002529,6.50e-09,1;UBERON:0010538,6.50e-09,1;UBERON:0003661,6.50e-09,1;UBERON:0010890,6.50e-09,1;UBERON:0002471,6.50e-09,1;UBERON:0001383,6.50e-09,1;UBERON:0004357,6.50e-09,1;UBERON:0004347,6.50e-09,1;UBERON:0005420,6.50e-09,1;UBERON:0005732,6.50e-09,1;UBERON:0010758,6.50e-09,1;UBERON:0010707,6.50e-09,1;UBERON:0000978,6.50e-09,1;UBERON:0002103,6.50e-09,1;UBERON:0001665,6.50e-09,1;UBERON:0003823,6.50e-09,1;UBERON:0000154,6.50e-09,1;UBERON:0010709,6.50e-09,1;UBERON:0005733,6.50e-09,1;UBERON:0005730,6.50e-09,1;UBERON:0002084,7.01e-09,1;UBERON:0002082,7.01e-09,1;UBERON:0010226,7.01e-09,1;UBERON:0002079,7.56e-09,1;UBERON:0002426,8.78e-09,1;UBERON:0003831,8.78e-09,1;UBERON:0003898,8.78e-09,1;UBERON:0004830,8.78e-09,1;UBERON:0003830,8.78e-09,1;UBERON:0005175,8.78e-09,1;UBERON:0001774,8.78e-09,1;UBERON:0001103,8.78e-09,1;UBERON:0010084,8.78e-09,1;UBERON:0002146,1.10e-08,1;UBERON:0005623,1.10e-08,1;UBERON:0002135,1.59e-08,1;UBERON:0000989,2.64e-08,1;UBERON:0008811,2.64e-08,1;UBERON:0006258,2.64e-08,1;UBERON:0005876,2.64e-08,1;UBERON:0004874,2.64e-08,1;UBERON:0000948,1.73e-07,24;UBERON:0005498,1.73e-07,24;UBERON:0004140,1.73e-07,24;UBERON:0009881,1.73e-07,24;UBERON:0004141,1.73e-07,24;UBERON:0003084,1.73e-07,24;UBERON:0007005,1.73e-07,24;UBERON:0004139,1.73e-07,24;UBERON:0004291,1.73e-07,24;UBERON:0003103,2.56e-07,68 | |||
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|short_description=p@chr1:16343563..16343579,+ | |short_description=p@chr1:16343563..16343579,+ | ||
}} | }} |
Latest revision as of 23:49, 27 July 2015
Short description: | p@chr1:16343563..16343579, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:16343563..16343579, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 1.08e-15 | 2 |
fat cell | 7.98e-12 | 15 |
preadipocyte of the breast | 1.97e-10 | 3 |
fibrocyte | 2.49e-10 | 3 |
tendon cell | 2.49e-10 | 3 |
mesenchymal stem cell of adipose | 9.52e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.30e-16 | 2 |
vascular disease | 6.03e-09 | 1 |
ischemia | 6.03e-09 | 1 |
extrinsic cardiomyopathy | 6.03e-09 | 1 |
myocardial ischemia | 6.03e-09 | 1 |
myocardial infarction | 6.03e-09 | 1 |
cardiovascular system disease | 1.53e-08 | 4 |
peripheral primitive neuroectodermal tumor | 2.29e-08 | 1 |