FFCP PHASE1:Hg19::chr1:16342059..16342090,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:16342059..16342090,+ | |||
|coexpression_cluster_id=C336 | |||
|description=CAGE_peak_at_chr1:16342059..16342090,+ | |description=CAGE_peak_at_chr1:16342059..16342090,+ | ||
|id=chr1:16342059..16342090,+ | |id=chr1:16342059..16342090,+ | ||
|ontology_enrichment_celltype=CL:0000136!9.02e-11!15;CL:0002334!7.10e-08!12;CL:0002580!1.16e-07!3;CL:0002615!2.18e-07!3 | |ontology_enrichment_celltype=CL:0000136!9.02e-11!15;CL:0002334!7.10e-08!12;CL:0002580!1.16e-07!3;CL:0002615!2.18e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002617;6.58e-15;2!CL:0002580;3.01e-10;3!CL:0002570;8.33e-09;8!CL:0000511;2.64e-08;1!CL:0002625;2.64e-08;1!CL:0002581;2.64e-08;1!CL:0000216;2.64e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,5.32e-15,2;CL:0000136,7.45e-12,15;CL:0002580,2.49e-10,3;CL:0002570,7.70e-09,8;CL:0000511,2.13e-08,1;CL:0002625,2.13e-08,1;CL:0000216,2.13e-08,1;CL:0002581,2.46e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.59e-09;1!UBERON:0010227;7.01e-09;1!UBERON:0004140;8.77e-09;1!UBERON:0000358;1.47e-08;1!UBERON:0005062;4.38e-08;4!UBERON:0007284;4.38e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;3.83e-16;2!DOID:178;6.03e-09;1!DOID:326;6.03e-09;1!DOID:3978;6.03e-09;1!DOID:3394;6.03e-09;1!DOID:5844;6.03e-09;1!DOID:1287;1.65e-08;4!DOID:3369;2.64e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.83e-16,2;DOID:178,6.03e-09,1;DOID:326,6.03e-09,1;DOID:3978,6.03e-09,1;DOID:3394,6.03e-09,1;DOID:5844,6.03e-09,1;DOID:1287,1.65e-08,4;DOID:3369,1.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-09!115;UBERON:0001443!2.09e-09!11;UBERON:0000310!8.37e-08!10 | |ontology_enrichment_uberon=UBERON:0007023!1.03e-09!115;UBERON:0001443!2.09e-09!11;UBERON:0000310!8.37e-08!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.05e-17;25!UBERON:0000310;2.35e-11;10!UBERON:0004151;4.58e-11;3!UBERON:0001723;9.55e-11;3!UBERON:0001033;9.55e-11;3!UBERON:0003978;1.70e-10;3!UBERON:0000946;1.70e-10;3!UBERON:0001443;2.44e-10;11!UBERON:0002084;5.59e-09;1!UBERON:0002082;5.59e-09;1!UBERON:0002079;7.01e-09;1!UBERON:0001389;7.55e-09;1!UBERON:0000026;7.55e-09;1!UBERON:0008784;7.55e-09;1!UBERON:0006058;7.55e-09;1!UBERON:0003663;7.55e-09;1!UBERON:0004256;7.55e-09;1!UBERON:0004708;7.55e-09;1!UBERON:0002101;7.55e-09;1!UBERON:0004709;7.55e-09;1!UBERON:0002529;7.55e-09;1!UBERON:0010538;7.55e-09;1!UBERON:0003661;7.55e-09;1!UBERON:0010890;7.55e-09;1!UBERON:0002471;7.55e-09;1!UBERON:0001383;7.55e-09;1!UBERON:0010758;7.55e-09;1!UBERON:0010707;7.55e-09;1!UBERON:0000978;7.55e-09;1!UBERON:0002103;7.55e-09;1!UBERON:0001665;7.55e-09;1!UBERON:0003823;7.55e-09;1!UBERON:0000154;7.55e-09;1!UBERON:0010709;7.55e-09;1!UBERON:0002146;1.10e-08;1!UBERON:0005623;1.10e-08;1!UBERON:0001013;1.85e-08;14!UBERON:0002135;2.64e-08;1!UBERON:0001136;2.64e-08;1!UBERON:0001343;2.64e-08;1!UBERON:0004910;2.64e-08;1!UBERON:0004813;2.64e-08;1!UBERON:0000948;3.37e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.83e-16,27;UBERON:0000310,1.94e-11,10;UBERON:0004151,4.59e-11,3;UBERON:0001723,1.00e-10,3;UBERON:0001033,1.00e-10,3;UBERON:0010056,1.00e-10,3;UBERON:0001443,2.05e-10,11;UBERON:0003978,2.27e-10,3;UBERON:0009751,2.27e-10,3;UBERON:0000946,2.27e-10,3;UBERON:0002523,2.27e-10,3;UBERON:0005983,2.27e-10,3;UBERON:0002165,2.27e-10,3;UBERON:0002062,2.27e-10,3;UBERON:0007280,2.27e-10,3;UBERON:0003103,4.40e-09,68;UBERON:0002084,5.59e-09,1;UBERON:0002082,5.59e-09,1;UBERON:0010226,5.59e-09,1;UBERON:0002079,7.01e-09,1;UBERON:0005418,7.56e-09,1;UBERON:0001389,7.56e-09,1;UBERON:0000026,7.56e-09,1;UBERON:0008784,7.56e-09,1;UBERON:0006058,7.56e-09,1;UBERON:0003663,7.56e-09,1;UBERON:0004256,7.56e-09,1;UBERON:0004708,7.56e-09,1;UBERON:0002101,7.56e-09,1;UBERON:0004709,7.56e-09,1;UBERON:0002529,7.56e-09,1;UBERON:0010538,7.56e-09,1;UBERON:0003661,7.56e-09,1;UBERON:0010890,7.56e-09,1;UBERON:0002471,7.56e-09,1;UBERON:0001383,7.56e-09,1;UBERON:0004357,7.56e-09,1;UBERON:0004347,7.56e-09,1;UBERON:0005420,7.56e-09,1;UBERON:0005732,7.56e-09,1;UBERON:0010758,7.56e-09,1;UBERON:0010707,7.56e-09,1;UBERON:0000978,7.56e-09,1;UBERON:0002103,7.56e-09,1;UBERON:0001665,7.56e-09,1;UBERON:0003823,7.56e-09,1;UBERON:0000154,7.56e-09,1;UBERON:0010709,7.56e-09,1;UBERON:0005733,7.56e-09,1;UBERON:0005730,7.56e-09,1;UBERON:0002146,1.18e-08,1;UBERON:0005623,1.18e-08,1;UBERON:0001013,1.71e-08,14;UBERON:0001136,2.13e-08,1;UBERON:0001343,2.13e-08,1;UBERON:0004910,2.13e-08,1;UBERON:0005154,2.13e-08,1;UBERON:0005295,2.13e-08,1;UBERON:0004813,2.13e-08,1;UBERON:0005297,2.13e-08,1;UBERON:0005294,2.13e-08,1;UBERON:0010141,2.13e-08,1;UBERON:0005891,2.13e-08,1;UBERON:0002135,3.79e-08,1;UBERON:0000948,1.85e-07,24;UBERON:0005498,1.85e-07,24;UBERON:0004140,1.85e-07,24;UBERON:0009881,1.85e-07,24;UBERON:0004141,1.85e-07,24;UBERON:0003084,1.85e-07,24;UBERON:0007005,1.85e-07,24;UBERON:0004139,1.85e-07,24;UBERON:0004291,1.85e-07,24;UBERON:0007023,6.01e-07,114 | |||
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|short_description=p@chr1:16342059..16342090,+ | |short_description=p@chr1:16342059..16342090,+ | ||
}} | }} |
Latest revision as of 23:49, 27 July 2015
Short description: | p@chr1:16342059..16342090, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:16342059..16342090, + |
Coexpression cluster: | C336_left_heart_skeletal_breast_lung_mature_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 5.32e-15 | 2 |
fat cell | 7.45e-12 | 15 |
preadipocyte of the breast | 2.49e-10 | 3 |
mesenchymal stem cell of adipose | 7.70e-09 | 8 |
androgen binding protein secreting cell | 2.13e-08 | 1 |
seminiferous tubule epithelial cell | 2.13e-08 | 1 |
Sertoli cell | 2.13e-08 | 1 |
perirenal preadipocyte | 2.46e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.83e-16 | 2 |
vascular disease | 6.03e-09 | 1 |
ischemia | 6.03e-09 | 1 |
extrinsic cardiomyopathy | 6.03e-09 | 1 |
myocardial ischemia | 6.03e-09 | 1 |
myocardial infarction | 6.03e-09 | 1 |
cardiovascular system disease | 1.65e-08 | 4 |
peripheral primitive neuroectodermal tumor | 1.84e-08 | 1 |