FFCP PHASE1:Hg19::chr1:153285441..153285450,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:153285441..153285450,- | |||
|coexpression_cluster_id=C683 | |coexpression_cluster_id=C683 | ||
|description=CAGE_peak_at_chr1:153285441..153285450,- | |description=CAGE_peak_at_chr1:153285441..153285450,- | ||
|id=chr1:153285441..153285450,- | |id=chr1:153285441..153285450,- | ||
|ontology_enrichment_celltype=CL:0000575!3.09e-14!2;CL:0002621!8.21e-10!3;CL:0002076!1.17e-08!43;CL:0002159!2.96e-08!13;CL:0002251!1.02e-07!21 | |ontology_enrichment_celltype=CL:0000575!3.09e-14!2;CL:0002621!8.21e-10!3;CL:0002076!1.17e-08!43;CL:0002159!2.96e-08!13;CL:0002251!1.02e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.45e-12;2!CL:0001016;2.45e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.85e-12,2;CL:0001016,1.85e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.06e-23;1!UBERON:0008814;2.45e-12;2!UBERON:0010056;2.45e-12;2 | |||
|ontology_enrichment_disease=DOID:3151!2.90e-08!1;DOID:3149!2.90e-08!1 | |ontology_enrichment_disease=DOID:3151!2.90e-08!1;DOID:3149!2.90e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;2.93e-23;1!DOID:3149;2.93e-23;1!DOID:3451;2.45e-12;2!DOID:4159;2.45e-12;2!DOID:0060122;2.45e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,6.40e-23,1;DOID:3149,6.40e-23,1;DOID:3451,3.62e-12,2;DOID:4159,3.62e-12,2;DOID:0060122,3.62e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!4.62e-11!21;UBERON:0001949!8.21e-10!3;UBERON:0003102!2.12e-09!95;UBERON:0001004!4.02e-09!72;UBERON:0000161!1.29e-08!35;UBERON:0002372!1.77e-08!1;UBERON:0001961!1.77e-08!1;UBERON:0001744!1.77e-08!1;UBERON:0001735!1.77e-08!1;UBERON:0007029!3.58e-08!1;UBERON:0000165!3.67e-08!28;UBERON:0000930!3.67e-08!28;UBERON:0000997!5.05e-08!1;UBERON:0005056!5.05e-08!1;UBERON:0001043!7.11e-08!4;UBERON:0009143!7.11e-08!4;UBERON:0001444!8.26e-08!48;UBERON:0000014!8.42e-08!4;UBERON:0000964!1.49e-07!4;UBERON:0004348!1.49e-07!4;UBERON:0005427!1.49e-07!4 | |ontology_enrichment_uberon=UBERON:0000166!4.62e-11!21;UBERON:0001949!8.21e-10!3;UBERON:0003102!2.12e-09!95;UBERON:0001004!4.02e-09!72;UBERON:0000161!1.29e-08!35;UBERON:0002372!1.77e-08!1;UBERON:0001961!1.77e-08!1;UBERON:0001744!1.77e-08!1;UBERON:0001735!1.77e-08!1;UBERON:0007029!3.58e-08!1;UBERON:0000165!3.67e-08!28;UBERON:0000930!3.67e-08!28;UBERON:0000997!5.05e-08!1;UBERON:0005056!5.05e-08!1;UBERON:0001043!7.11e-08!4;UBERON:0009143!7.11e-08!4;UBERON:0001444!8.26e-08!48;UBERON:0000014!8.42e-08!4;UBERON:0000964!1.49e-07!4;UBERON:0004348!1.49e-07!4;UBERON:0005427!1.49e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.93e-23;1!UBERON:0001961;2.93e-23;1!UBERON:0001744;2.93e-23;1!UBERON:0001042;2.93e-23;1!UBERON:0001735;2.93e-23;1!UBERON:0000002;1.22e-15;6!UBERON:0001560;1.22e-15;6!UBERON:0000341;2.45e-12;2!UBERON:0006562;2.45e-12;2!UBERON:0001043;8.31e-09;3!UBERON:0001723;1.17e-08;3!UBERON:0001033;1.17e-08;3!UBERON:0000014;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.34e-23,1;UBERON:0001961,1.34e-23,1;UBERON:0001744,1.34e-23,1;UBERON:0001735,1.34e-23,1;UBERON:0000002,1.05e-15,6;UBERON:0001560,1.05e-15,6;UBERON:0000341,3.24e-12,2;UBERON:0001042,7.74e-10,10;UBERON:0009145,7.74e-10,10;UBERON:0006562,5.00e-09,11;UBERON:0001043,8.31e-09,3;UBERON:0009143,8.31e-09,3;UBERON:0001723,1.21e-08,3;UBERON:0001033,1.21e-08,3;UBERON:0010056,1.21e-08,3 | |||
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|short_description=p@chr1:153285441..153285450,- | |short_description=p@chr1:153285441..153285450,- | ||
}} | }} |
Latest revision as of 21:40, 27 July 2015
Short description: | p@chr1:153285441..153285450, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153285441..153285450, - |
Coexpression cluster: | C683_esophagus_tongue_tonsil_Corneal_cervical_Esophageal_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.85e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.85e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.34e-23 | 1 |
mucosa-associated lymphoid tissue | 1.34e-23 | 1 |
lymphoid tissue | 1.34e-23 | 1 |
tonsillar ring | 1.34e-23 | 1 |
uterine cervix | 1.05e-15 | 6 |
neck of organ | 1.05e-15 | 6 |
throat | 3.24e-12 | 2 |
chordate pharynx | 7.74e-10 | 10 |
pharyngeal region of foregut | 7.74e-10 | 10 |
pharynx | 5.00e-09 | 11 |
esophagus | 8.31e-09 | 3 |
esophageal region | 8.31e-09 | 3 |
tongue | 1.21e-08 | 3 |
gustatory system | 1.21e-08 | 3 |
future tongue | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 6.40e-23 | 1 |
keratoacanthoma | 6.40e-23 | 1 |
skin carcinoma | 3.62e-12 | 2 |
skin cancer | 3.62e-12 | 2 |
integumentary system cancer | 3.62e-12 | 2 |