FFCP PHASE1:Hg19::chr1:114522973..114522995,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:114522973..114522995,+ | |||
|coexpression_cluster_id=C323 | |coexpression_cluster_id=C323 | ||
|description=CAGE_peak_at_chr1:114522973..114522995,+ | |description=CAGE_peak_at_chr1:114522973..114522995,+ | ||
|id=chr1:114522973..114522995,+ | |id=chr1:114522973..114522995,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.47e-15!180;CL:0000057!1.56e-11!75;CL:0000188!4.10e-08!9 | |ontology_enrichment_celltype=CL:0000055!1.47e-15!180;CL:0000057!1.56e-11!75;CL:0000188!4.10e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.62e-23;3!CL:0002536;1.22e-16;2!CL:0000349;4.32e-14;19!CL:0002570;7.16e-09;8!CL:0000228;1.32e-08;1!CL:0002581;1.32e-08;1!CL:0002372;1.32e-08;1!CL:0000188;8.10e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.96e-23,3;CL:0002536,1.27e-16,2;CL:0000349,4.48e-14,19;CL:0002570,6.17e-09,8;CL:0002581,1.05e-08,1;CL:0000228,1.13e-08,1;CL:0002372,1.13e-08,1;CL:0000188,7.91e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.48e-09;1!UBERON:0004874;1.32e-08;1!UBERON:0003099;1.32e-08;1!UBERON:0003852;1.32e-08;1!UBERON:0005795;3.45e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.19e-10;3!DOID:127;1.19e-10;3!DOID:0060072;3.34e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.26e-10,3;DOID:127,1.26e-10,3;DOID:0060072,3.46e-08,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;8.57e-18;4!UBERON:0000478;7.14e-15;24!UBERON:0005795;5.48e-09;1!UBERON:0000989;1.32e-08;1!UBERON:0005705;1.32e-08;1!UBERON:0008811;1.32e-08;1!UBERON:0008193;1.32e-08;1!UBERON:0010912;1.32e-08;1!UBERON:0002514;1.32e-08;1!UBERON:0003457;1.32e-08;1!UBERON:0008907;1.32e-08;1!UBERON:0008001;1.32e-08;1!UBERON:0007213;1.32e-08;1!UBERON:0009891;1.32e-08;1!UBERON:0007914;1.32e-08;1!UBERON:0007375;1.32e-08;1!UBERON:0003323;1.32e-08;1!UBERON:0010258;1.32e-08;1!UBERON:0005253;1.32e-08;1!UBERON:0007842;1.32e-08;1!UBERON:0002397;1.32e-08;1!UBERON:0003113;1.32e-08;1!UBERON:0003277;1.32e-08;1!UBERON:0001709;1.32e-08;1!UBERON:0002244;1.32e-08;1!UBERON:0005620;1.32e-08;1!UBERON:0010364;1.32e-08;1!UBERON:0004288;1.32e-08;1!UBERON:0001013;1.33e-08;14!UBERON:0001134;1.53e-07;16!UBERON:0002036;1.53e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,9.89e-18,4;UBERON:0004340,9.89e-18,4;UBERON:0000478,7.46e-15,24;UBERON:0005631,1.38e-13,14;UBERON:0000158,1.38e-13,14;UBERON:0005795,8.50e-12,22;UBERON:0003124,2.31e-10,7;UBERON:0000989,9.74e-09,1;UBERON:0008811,9.74e-09,1;UBERON:0006258,9.74e-09,1;UBERON:0005876,9.74e-09,1;UBERON:0004874,9.74e-09,1;UBERON:0000995,9.88e-09,21;UBERON:0001013,1.12e-08,14;UBERON:0005705,2.22e-08,1;UBERON:0008193,2.22e-08,1;UBERON:0010912,2.22e-08,1;UBERON:0002514,2.22e-08,1;UBERON:0003457,2.22e-08,1;UBERON:0008907,2.22e-08,1;UBERON:0008001,2.22e-08,1;UBERON:0007213,2.22e-08,1;UBERON:0009891,2.22e-08,1;UBERON:0007914,2.22e-08,1;UBERON:0009292,2.22e-08,1;UBERON:0003099,2.22e-08,1;UBERON:0007375,2.22e-08,1;UBERON:0003323,2.22e-08,1;UBERON:0010258,2.22e-08,1;UBERON:0007842,2.22e-08,1;UBERON:0009494,2.22e-08,1;UBERON:0010042,2.22e-08,1;UBERON:0010045,2.22e-08,1;UBERON:0010259,2.22e-08,1;UBERON:0010359,2.22e-08,1;UBERON:0009526,2.22e-08,1;UBERON:0002397,2.22e-08,1;UBERON:0003113,2.22e-08,1;UBERON:0003277,2.22e-08,1;UBERON:0001709,2.22e-08,1;UBERON:0004066,2.22e-08,1;UBERON:0002244,2.22e-08,1;UBERON:0005620,2.22e-08,1;UBERON:0004362,2.22e-08,1;UBERON:0010364,2.22e-08,1;UBERON:0010046,2.22e-08,1;UBERON:0005868,2.22e-08,1;UBERON:0007238,2.22e-08,1;UBERON:0004288,2.22e-08,1;UBERON:0004068,2.22e-08,1;UBERON:0010334,2.22e-08,1;UBERON:0003852,2.22e-08,1;UBERON:0010253,2.22e-08,1;UBERON:0003975,2.52e-08,22;UBERON:0004175,2.67e-07,25 | |||
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| ||
|short_description=p@chr1:114522973..114522995,+ | |short_description=p@chr1:114522973..114522995,+ | ||
}} | }} |
Latest revision as of 19:57, 27 July 2015
Short description: | p@chr1:114522973..114522995, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:114522973..114522995, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.96e-23 | 3 |
amniotic epithelial cell | 1.27e-16 | 2 |
extraembryonic cell | 4.48e-14 | 19 |
mesenchymal stem cell of adipose | 6.17e-09 | 8 |
perirenal preadipocyte | 1.05e-08 | 1 |
multinucleate cell | 1.13e-08 | 1 |
myotube | 1.13e-08 | 1 |
cell of skeletal muscle | 7.91e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.26e-10 | 3 |
leiomyoma | 1.26e-10 | 3 |
benign neoplasm | 3.46e-08 | 4 |