FFCP PHASE1:Hg19::chr19:51527943..51527947,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:51527943..51527947,- | |||
|coexpression_cluster_id=C1243 | |coexpression_cluster_id=C1243 | ||
|description=CAGE_peak_at_chr19:51527943..51527947,- | |description=CAGE_peak_at_chr19:51527943..51527947,- | ||
|id=chr19:51527943..51527947,- | |id=chr19:51527943..51527947,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.88e-21;1!UBERON:0008801;3.12e-21;1!UBERON:0006242;3.12e-21;1!UBERON:0009143;6.31e-21;1!UBERON:0008814;2.23e-11;2!UBERON:0010056;2.23e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.77e-10!72;UBERON:0000065!6.84e-09!53;UBERON:0001829!1.73e-08!2;UBERON:0003127!1.01e-07!2;UBERON:0000166!3.35e-07!21;UBERON:0007023!7.87e-07!115;UBERON:0004119!9.60e-07!169;UBERON:0000925!9.60e-07!169;UBERON:0006595!9.60e-07!169 | |ontology_enrichment_uberon=UBERON:0001004!1.77e-10!72;UBERON:0000065!6.84e-09!53;UBERON:0001829!1.73e-08!2;UBERON:0003127!1.01e-07!2;UBERON:0000166!3.35e-07!21;UBERON:0007023!7.87e-07!115;UBERON:0004119!9.60e-07!169;UBERON:0000925!9.60e-07!169;UBERON:0006595!9.60e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;8.11e-41;2!UBERON:0001723;2.38e-27;3!UBERON:0001033;2.38e-27;3!UBERON:0001736;1.88e-21;1!UBERON:0001831;3.12e-21;1!UBERON:0001567;3.12e-21;1!UBERON:0001044;2.41e-14;6!UBERON:0003293;2.41e-14;6!UBERON:0003294;2.41e-14;6!UBERON:0010047;2.41e-14;6!UBERON:0003408;2.41e-14;6!UBERON:0000167;2.41e-14;6!UBERON:0001041;1.86e-13;14!UBERON:0000165;8.94e-12;28!UBERON:0004089;2.60e-11;2!UBERON:0000341;3.70e-11;2!UBERON:0002110;5.73e-08;3!UBERON:0001043;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,7.33e-41,2;UBERON:0001723,3.11e-27,3;UBERON:0001033,3.11e-27,3;UBERON:0010056,3.11e-27,3;UBERON:0001736,1.88e-21,1;UBERON:0006298,1.88e-21,1;UBERON:0001831,2.82e-21,1;UBERON:0001567,2.82e-21,1;UBERON:0008801,2.82e-21,1;UBERON:0000166,7.43e-15,22;UBERON:0001044,2.33e-14,6;UBERON:0003293,2.33e-14,6;UBERON:0003294,2.33e-14,6;UBERON:0010047,2.33e-14,6;UBERON:0000167,2.33e-14,6;UBERON:0000165,2.30e-11,29;UBERON:0000930,2.30e-11,29;UBERON:0004089,2.47e-11,2;UBERON:0000341,3.02e-11,2;UBERON:0000161,3.20e-09,36;UBERON:0003408,5.36e-09,10;UBERON:0001042,7.07e-09,10;UBERON:0009145,7.07e-09,10;UBERON:0006562,3.76e-08,11;UBERON:0000153,3.84e-08,62;UBERON:0007811,3.84e-08,62;UBERON:0002110,5.93e-08,3;UBERON:0006242,5.93e-08,3;UBERON:0001043,7.26e-08,3;UBERON:0009143,7.26e-08,3;UBERON:0001444,7.50e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,1.89948683245908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736647911487171,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,1.45483524732629,0,0,0,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,2.19303106742873,0.992422356778588,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.4582137370881,0,0,0,0,0.365753774946808,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0.301925687133347,0,0,7.05475944542284,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88093925106811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.803892390468535,0,0,1.91910583710883,0,0,0,0,0,0,4.13661821004227,1.02669990325584,0.202056159043763,0.286888821570705,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,1.89948683245908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736647911487171,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,1.45483524732629,0,0,0,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,2.19303106742873,0.992422356778588,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.4582137370881,0,0,0,0,0.365753774946808,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0.301925687133347,0,0,7.05475944542284,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88093925106811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.803892390468535,0,0,1.91910583710883,0,0,0,0,0,0,4.13661821004227,1.02669990325584,0.202056159043763,0.286888821570705,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:51527943..51527947,- | |short_description=p@chr19:51527943..51527947,- | ||
}} | }} |
Latest revision as of 16:37, 27 July 2015
Short description: | p@chr19:51527943..51527947, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51527943..51527947, - |
Coexpression cluster: | C1243_submaxillary_salivary_smallcell_esophagus_cervical_tonsil_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 7.33e-41 | 2 |
tongue | 3.11e-27 | 3 |
gustatory system | 3.11e-27 | 3 |
future tongue | 3.11e-27 | 3 |
submandibular gland | 1.88e-21 | 1 |
submandibular gland primordium | 1.88e-21 | 1 |
parotid gland | 2.82e-21 | 1 |
cheek | 2.82e-21 | 1 |
parotid gland primordium | 2.82e-21 | 1 |
oral opening | 7.43e-15 | 22 |
saliva-secreting gland | 2.33e-14 | 6 |
gland of oral region | 2.33e-14 | 6 |
gland of foregut | 2.33e-14 | 6 |
oral gland | 2.33e-14 | 6 |
oral cavity | 2.33e-14 | 6 |
mouth | 2.30e-11 | 29 |
stomodeum | 2.30e-11 | 29 |
midface | 2.47e-11 | 2 |
throat | 3.02e-11 | 2 |
orifice | 3.20e-09 | 36 |
gland of gut | 5.36e-09 | 10 |
chordate pharynx | 7.07e-09 | 10 |
pharyngeal region of foregut | 7.07e-09 | 10 |
pharynx | 3.76e-08 | 11 |
anterior region of body | 3.84e-08 | 62 |
craniocervical region | 3.84e-08 | 62 |
gallbladder | 5.93e-08 | 3 |
gall bladder primordium | 5.93e-08 | 3 |
esophagus | 7.26e-08 | 3 |
esophageal region | 7.26e-08 | 3 |
subdivision of head | 7.50e-07 | 49 |