FFCP PHASE1:Hg19::chr19:49553788..49553818,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:49553788..49553818,- | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_at_chr19:49553788..49553818,- | |||
|id=chr19:49553788..49553818,- | |||
|ontology_enrichment_celltype=CL:0000243!7.35e-10!15;CL:0000125!7.35e-10!15;CL:0000030!7.35e-10!15;CL:0000339!7.35e-10!15;CL:0000066!3.03e-09!254;CL:0000055!5.14e-09!180;CL:0000548!1.33e-08!679;CL:0000004!1.33e-08!679;CL:0000255!1.33e-08!679;CL:0000095!1.77e-08!17;CL:0000123!1.77e-08!17;CL:0000012!2.12e-08!682;CL:0000128!1.30e-07!7;CL:0000126!1.30e-07!7;CL:0000127!1.30e-07!7;CL:0002453!1.30e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.19e-10;23!CL:0000054;1.56e-09;2!CL:0000137;1.56e-09;2!CL:0000092;1.56e-09;2!CL:0000128;2.54e-09;7!CL:0000126;2.54e-09;7!CL:0000127;2.54e-09;7!CL:0000650;4.52e-09;2!CL:1000500;4.52e-09;2!CL:1000618;4.52e-09;2!CL:1001318;4.52e-09;2!CL:0002173;4.52e-09;2!CL:0000243;5.26e-08;15!CL:0000125;5.26e-08;15!CL:0000095;4.25e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.22e-10,23;CL:0000054,1.81e-09,2;CL:0000137,1.81e-09,2;CL:0000092,1.81e-09,2;CL:0000128,2.33e-09,7;CL:0000126,2.33e-09,7;CL:0000127,2.33e-09,7;CL:0002453,2.33e-09,7;CL:0000650,4.53e-09,2;CL:1000500,4.53e-09,2;CL:1000618,4.53e-09,2;CL:1001318,4.53e-09,2;CL:0002173,4.53e-09,2;CL:0000243,4.99e-08,15;CL:0000125,4.99e-08,15;CL:0000030,4.99e-08,15;CL:0000339,4.99e-08,15;CL:0000095,4.06e-07,17;CL:0000123,4.06e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000339;5.26e-08;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;1.56e-09;2!DOID:4305;1.56e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,1.81e-09,2;DOID:4305,1.81e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!2.28e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;4.52e-09;2!UBERON:0003838;4.52e-09;2!UBERON:0003586;4.52e-09;2!UBERON:0005169;4.52e-09;2!UBERON:0002321;4.52e-09;2!UBERON:0005215;4.52e-09;2!UBERON:0002303;4.52e-09;2!UBERON:0002319;4.52e-09;2!UBERON:0002097;8.04e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,4.53e-09,2;UBERON:0003838,4.53e-09,2;UBERON:0003586,4.53e-09,2;UBERON:0005169,4.53e-09,2;UBERON:0002321,4.53e-09,2;UBERON:0005215,4.53e-09,2;UBERON:0002303,4.53e-09,2;UBERON:0002319,4.53e-09,2;UBERON:0002097,2.41e-08,41;UBERON:0002199,3.10e-07,46;UBERON:0002416,3.10e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,2.37390280405608,0,0,0,0,0,0,1.84681587115182,2.65200898617529,0,0.572471974262113,0.958120975510189,1.38096903554283,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0.378139268656271,0.443458794925128,0.966182642624386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0,0,0.560677600142307,0,1.72667283892012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0.113432183160021,6.99619579186562,0,0,15.9048280924733,0.824420233907511,2.31876486041066,0.930584281657949,5.23206629947925,1.07180705677318,3.78650661366172,0,0,14.2003837006646,8.06016785821122,0.847802961552438,0.386521706326594,0.545492241181669,0,0,0,0,0.207322110030741,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0,0,0,0,4.03157107677263,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36669142910475,0,0,0,0,0,0.771622122786426,0,0.532844358032199,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.399891964728228,0,0,0,0,0,2.85273810081437,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,3.32112799267718,0.921845842708516,0,0,0,0,0,0,0,1.66435439510497,0,0,1.68808170616869,0.280660094433074,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0.902399225814824,0,4.70609861506113,1.46139224653261,0.422206515571503,0,0,0.431831832204279,4.62681758070868,1.62567862526312,3.01013864312912,0,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0,1.55668090191184,0.907604499126468,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,0,0.638063562472921,0,0,0.94443704049192,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.886860307073351,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0,0.921482106297696,0,0,0,0,0,0,0,0,2.14764233254525,0,0,6.11104787801823,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.922255617552241,0.179515288819544,0,0.638002319463839,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0,0,0,0,0.330991955875499,0,0,0,1.8027707491708,0,0.391969589657511,0.522355239482415,0,0.171986032471617,0.0967563312890851,0,0,0,0,0,2.19267079434801,2.18586072873289,0,0,4.40873511383435,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0.67952103036807,2.196659772559,0.611989305817931,3.46740707881823,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,20.616950636036,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.751288044986092,0,0,0,0.429642228169954,0,0,9.60066635191569,0,0,0,0.770479321629213,0,0,4.30741258473318,11.8076461905155,0,15.5807291740894,0,0,0.353378291891762,0.192914038270915,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,9.81477185010256,0,0,0.115525666150338,9.15317029121201,0.690359926060101,0,0,51.8382026568047,0,0,0,51.8974862621829,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0.333694205676207,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,15.2886230236389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69927114687817,0,0,0,1.07132363163395,0,1.04313776695919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,4.1515666991597,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:49553788..49553818,- | |||
}} |
Latest revision as of 15:59, 27 July 2015
Short description: | p@chr19:49553788..49553818, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49553788..49553818, - |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.22e-10 | 23 |
bone matrix secreting cell | 1.81e-09 | 2 |
osteocyte | 1.81e-09 | 2 |
osteoclast | 1.81e-09 | 2 |
oligodendrocyte | 2.33e-09 | 7 |
macroglial cell | 2.33e-09 | 7 |
astrocyte | 2.33e-09 | 7 |
oligodendrocyte precursor cell | 2.33e-09 | 7 |
mesangial cell | 4.53e-09 | 2 |
kidney interstitial cell | 4.53e-09 | 2 |
juxtaglomerular complex cell | 4.53e-09 | 2 |
renal interstitial pericyte | 4.53e-09 | 2 |
extraglomerular mesangial cell | 4.53e-09 | 2 |
glial cell (sensu Vertebrata) | 4.99e-08 | 15 |
glial cell | 4.99e-08 | 15 |
glioblast | 4.99e-08 | 15 |
glioblast (sensu Vertebrata) | 4.99e-08 | 15 |
neuron associated cell | 4.06e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 4.06e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 4.53e-09 | 2 |
abdominal segment connective tissue | 4.53e-09 | 2 |
trunk connective tissue | 4.53e-09 | 2 |
interstitial tissue | 4.53e-09 | 2 |
extraglomerular mesangium | 4.53e-09 | 2 |
kidney interstitium | 4.53e-09 | 2 |
juxtaglomerular apparatus | 4.53e-09 | 2 |
mesangium | 4.53e-09 | 2 |
skin of body | 2.41e-08 | 41 |
integument | 3.10e-07 | 46 |
integumental system | 3.10e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 1.81e-09 | 2 |
bone giant cell tumor | 1.81e-09 | 2 |