FFCP PHASE1:Hg19::chr19:45281245..45281260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_CU688574_5end | |association_with_transcript=57bp_to_CU688574_5end | ||
|cluster_id=chr19:45281245..45281260,+ | |||
|coexpression_cluster_id=C1455 | |coexpression_cluster_id=C1455 | ||
|description=CAGE_peak_1_at_CU688574_5end | |description=CAGE_peak_1_at_CU688574_5end | ||
|id=chr19:45281245..45281260,+ | |id=chr19:45281245..45281260,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.80e-31!254;CL:0002076!2.00e-24!43;CL:0000223!1.74e-23!59;CL:0002368!2.34e-14!13;CL:0002251!5.58e-11!21;CL:0002202!3.94e-10!9;CL:0002632!3.94e-10!9;CL:0002159!2.95e-09!13;CL:0002077!3.26e-08!33 | |ontology_enrichment_celltype=CL:0000066!3.80e-31!254;CL:0002076!2.00e-24!43;CL:0000223!1.74e-23!59;CL:0002368!2.34e-14!13;CL:0002251!5.58e-11!21;CL:0002202!3.94e-10!9;CL:0002632!3.94e-10!9;CL:0002159!2.95e-09!13;CL:0002077!3.26e-08!33 | ||
|ontology_enrichment_celltype_v019=CL:0002076;7.52e-30;42!CL:0002368;1.50e-25;13!CL:0002202;1.17e-17;9!CL:0002632;1.17e-17;9!CL:0002251;4.65e-15;20!CL:0002159;6.03e-13;14!CL:0002327;2.04e-09;4!CL:0002328;6.53e-09;3!CL:0000307;1.15e-08;3!CL:0002231;2.67e-08;3!CL:0002621;4.44e-08;3!CL:0002077;2.84e-07;34!CL:0000082;6.86e-07;19!CL:0000362;8.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.14e-38,42;CL:0000066,2.69e-36,253;CL:0000223,4.53e-34,58;CL:0002368,1.94e-25,13;CL:0002202,1.11e-17,9;CL:0002632,1.11e-17,9;CL:0002251,5.33e-15,20;CL:0002159,5.35e-13,14;CL:0002327,2.04e-09,4;CL:0002328,6.63e-09,3;CL:0000068,1.24e-08,3;CL:0000069,1.24e-08,3;CL:0000307,1.24e-08,3;CL:0000377,1.24e-08,3;CL:0002321,2.71e-08,250;CL:0002231,3.41e-08,3;CL:0002621,4.44e-08,3;CL:0000076,4.77e-08,63;CL:0002077,7.67e-08,34;CL:0000082,5.77e-07,19;CL:0000362,8.54e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;2.12e-19;58!CL:0000377;1.15e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!3.84e-14!14;DOID:305!1.03e-11!106;DOID:0050687!1.19e-07!143 | |ontology_enrichment_disease=DOID:1749!3.84e-14!14;DOID:305!1.03e-11!106;DOID:0050687!1.19e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.78e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.99e-19,14;DOID:305,1.16e-13,106;DOID:0050687,2.15e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.33e-23!169;UBERON:0000925!1.33e-23!169;UBERON:0006595!1.33e-23!169;UBERON:0001007!3.09e-18!155;UBERON:0001555!3.09e-18!155;UBERON:0007026!3.09e-18!155;UBERON:0004921!1.39e-14!129;UBERON:0004185!1.39e-14!129;UBERON:0005911!1.02e-13!82;UBERON:0000077!4.27e-13!130;UBERON:0000466!4.51e-11!126;UBERON:0000161!2.37e-10!35;UBERON:0000344!4.29e-10!12;UBERON:0001004!4.89e-10!72;UBERON:0006554!5.62e-10!44;UBERON:0000464!1.25e-09!104;UBERON:0001008!1.35e-09!45;UBERON:0005153!5.26e-09!37;UBERON:0007196!9.07e-09!14;UBERON:0001558!9.07e-09!14;UBERON:0003929!1.14e-08!54;UBERON:0000481!3.24e-08!347;UBERON:0000062!9.07e-08!511;UBERON:0000065!1.64e-07!53;UBERON:0005177!2.27e-07!107;UBERON:0003064!2.43e-07!37;UBERON:0001041!2.45e-07!98;UBERON:0000064!2.98e-07!219;UBERON:0000365!4.35e-07!5;UBERON:0003729!5.00e-07!5;UBERON:0000922!5.24e-07!612;UBERON:0001046!6.03e-07!19;UBERON:0001444!7.27e-07!48 | |ontology_enrichment_uberon=UBERON:0004119!1.33e-23!169;UBERON:0000925!1.33e-23!169;UBERON:0006595!1.33e-23!169;UBERON:0001007!3.09e-18!155;UBERON:0001555!3.09e-18!155;UBERON:0007026!3.09e-18!155;UBERON:0004921!1.39e-14!129;UBERON:0004185!1.39e-14!129;UBERON:0005911!1.02e-13!82;UBERON:0000077!4.27e-13!130;UBERON:0000466!4.51e-11!126;UBERON:0000161!2.37e-10!35;UBERON:0000344!4.29e-10!12;UBERON:0001004!4.89e-10!72;UBERON:0006554!5.62e-10!44;UBERON:0000464!1.25e-09!104;UBERON:0001008!1.35e-09!45;UBERON:0005153!5.26e-09!37;UBERON:0007196!9.07e-09!14;UBERON:0001558!9.07e-09!14;UBERON:0003929!1.14e-08!54;UBERON:0000481!3.24e-08!347;UBERON:0000062!9.07e-08!511;UBERON:0000065!1.64e-07!53;UBERON:0005177!2.27e-07!107;UBERON:0003064!2.43e-07!37;UBERON:0001041!2.45e-07!98;UBERON:0000064!2.98e-07!219;UBERON:0000365!4.35e-07!5;UBERON:0003729!5.00e-07!5;UBERON:0000922!5.24e-07!612;UBERON:0001046!6.03e-07!19;UBERON:0001444!7.27e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0000344;5.07e-15;20!UBERON:0007196;7.49e-15;15!UBERON:0001558;7.49e-15;15!UBERON:0005911;2.21e-14;36!UBERON:0004807;4.21e-11;22!UBERON:0003350;9.94e-11;8!UBERON:0005178;1.46e-10;34!UBERON:0002224;1.46e-10;34!UBERON:0005181;1.88e-10;35!UBERON:0003343;3.35e-10;4!UBERON:0004785;3.35e-10;4!UBERON:0001911;2.04e-09;4!UBERON:0000485;2.38e-09;7!UBERON:0000486;2.84e-09;12!UBERON:0004815;6.53e-09;3!UBERON:0002031;6.53e-09;3!UBERON:0003929;8.80e-09;7!UBERON:0003126;1.70e-08;7!UBERON:0001005;1.70e-08;7!UBERON:0003729;2.22e-08;13!UBERON:0000365;2.76e-08;5!UBERON:0001949;4.44e-08;3!UBERON:0000065;7.28e-08;44!UBERON:0004802;6.86e-07;19!UBERON:0000115;6.86e-07;19!UBERON:0005910;6.92e-07;6!UBERON:0000161;7.86e-07;19!UBERON:0000166;7.86e-07;19!UBERON:0000974;8.98e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.18e-21,160;UBERON:0000925,7.18e-21,160;UBERON:0006595,7.18e-21,160;UBERON:0001007,6.85e-16,145;UBERON:0001555,6.85e-16,145;UBERON:0007026,6.85e-16,145;UBERON:0000344,6.43e-15,20;UBERON:0007196,7.70e-15,15;UBERON:0001558,7.70e-15,15;UBERON:0001004,1.21e-14,74;UBERON:0005911,8.72e-14,82;UBERON:0005153,1.47e-12,37;UBERON:0004921,1.93e-12,118;UBERON:0000065,2.55e-12,54;UBERON:0005178,2.69e-12,34;UBERON:0002224,2.69e-12,34;UBERON:0005157,4.71e-12,47;UBERON:0005181,7.77e-12,35;UBERON:0003350,1.01e-10,8;UBERON:0003343,4.41e-10,4;UBERON:0004785,4.41e-10,4;UBERON:0000161,1.14e-09,36;UBERON:0001911,2.04e-09,4;UBERON:0005333,2.04e-09,4;UBERON:0008425,2.04e-09,4;UBERON:0005311,2.04e-09,4;UBERON:0000072,4.32e-09,47;UBERON:0001041,4.66e-09,87;UBERON:0004815,6.63e-09,3;UBERON:0002031,6.63e-09,3;UBERON:0003102,1.69e-08,99;UBERON:0003126,1.90e-08,7;UBERON:0001005,1.90e-08,7;UBERON:0000365,2.54e-08,5;UBERON:0003729,2.55e-08,13;UBERON:0004807,2.94e-08,28;UBERON:0001949,4.44e-08,3;UBERON:0005177,6.72e-08,101;UBERON:0000915,7.49e-08,52;UBERON:0008947,8.81e-08,38;UBERON:0003258,8.81e-08,38;UBERON:0000485,3.88e-07,9;UBERON:0000166,4.01e-07,22;UBERON:0004802,5.77e-07,19;UBERON:0000115,5.77e-07,19;UBERON:0005910,6.46e-07,6 | |||
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| ||
|short_description=p1@CU688574 | |short_description=p1@CU688574 | ||
}} | }} |
Latest revision as of 14:44, 27 July 2015
Short description: | p1@CU688574 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU688574_5end |
Coexpression cluster: | C1455_Tracheal_Corneal_Keratinocyte_Mammary_Urothelial_Bronchial_Esophageal |
Association with transcript: | 57bp_to_CU688574_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.14e-38 | 42 |
epithelial cell | 2.69e-36 | 253 |
endodermal cell | 4.53e-34 | 58 |
respiratory epithelial cell | 1.94e-25 | 13 |
epithelial cell of tracheobronchial tree | 1.11e-17 | 9 |
epithelial cell of lower respiratory tract | 1.11e-17 | 9 |
epithelial cell of alimentary canal | 5.33e-15 | 20 |
general ecto-epithelial cell | 5.35e-13 | 14 |
mammary gland epithelial cell | 2.04e-09 | 4 |
bronchial epithelial cell | 6.63e-09 | 3 |
duct epithelial cell | 1.24e-08 | 3 |
branched duct epithelial cell | 1.24e-08 | 3 |
tracheal epithelial cell | 1.24e-08 | 3 |
tracheoblast | 1.24e-08 | 3 |
embryonic cell | 2.71e-08 | 250 |
epithelial cell of prostate | 3.41e-08 | 3 |
gingival epithelial cell | 4.44e-08 | 3 |
squamous epithelial cell | 4.77e-08 | 63 |
ecto-epithelial cell | 7.67e-08 | 34 |
epithelial cell of lung | 5.77e-07 | 19 |
epidermal cell | 8.54e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.99e-19 | 14 |
carcinoma | 1.16e-13 | 106 |
cell type cancer | 2.15e-10 | 143 |