FFCP PHASE1:Hg19::chr19:42222094..42222107,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:42222094..42222107,+ | |||
|coexpression_cluster_id=C3797 | |||
|description=CAGE_peak_at_chr19:42222094..42222107,+ | |||
|id=chr19:42222094..42222107,+ | |||
|ontology_enrichment_celltype=CL:0002178!1.46e-08!3;CL:0002231!3.17e-08!3;CL:0000167!3.13e-07!1;CL:0000164!3.13e-07!1;CL:0000502!3.13e-07!1;CL:0000172!3.13e-07!1;CL:0000173!3.13e-07!1;CL:0002351!3.13e-07!1;CL:0002553!3.73e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.18e-19;1!CL:0000164;1.18e-19;1!CL:0000502;1.18e-19;1!CL:0000172;1.18e-19;1!CL:0000173;1.18e-19;1!CL:0002553;1.71e-19;1!CL:0002178;1.82e-07;3!CL:0002231;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.08e-19,1;CL:0000164,1.08e-19,1;CL:0000502,1.08e-19,1;CL:0000172,1.08e-19,1;CL:0000173,1.08e-19,1;CL:0002351,1.08e-19,1;CL:0002553,1.88e-19,1;CL:0002178,1.82e-07,3;CL:0002231,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002351;1.18e-19;1!UBERON:0009143;3.91e-19;1 | |||
|ontology_enrichment_disease=DOID:3493!9.57e-12!2;DOID:4430!3.13e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.18e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.08e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.33e-19!35;UBERON:0004921!3.89e-19!129;UBERON:0004185!3.89e-19!129;UBERON:0000160!9.92e-18!27;UBERON:0001007!4.39e-15!155;UBERON:0001555!4.39e-15!155;UBERON:0007026!4.39e-15!155;UBERON:0004119!7.98e-15!169;UBERON:0000925!7.98e-15!169;UBERON:0006595!7.98e-15!169;UBERON:0000059!2.01e-12!11;UBERON:0003127!2.84e-12!2;UBERON:0001155!4.36e-10!9;UBERON:0000077!1.57e-08!130;UBERON:0001154!5.89e-07!1;UBERON:0001153!5.89e-07!1;UBERON:0001046!5.99e-07!19;UBERON:0000065!6.68e-07!53;UBERON:0002372!6.99e-07!1;UBERON:0001961!6.99e-07!1;UBERON:0001744!6.99e-07!1;UBERON:0001735!6.99e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.99e-10;2!UBERON:0000341;2.99e-10;2!UBERON:0005178;4.69e-08;34!UBERON:0002224;4.69e-08;34!UBERON:0005409;8.91e-08;22!UBERON:0005181;1.15e-07;35!UBERON:0004921;2.32e-07;33!UBERON:0002114;2.47e-07;2!UBERON:0001043;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.72e-10,2;UBERON:0003127,3.58e-10,2;UBERON:0004921,3.24e-09,118;UBERON:0005178,9.08e-09,34;UBERON:0002224,9.08e-09,34;UBERON:0005181,1.59e-08,35;UBERON:0001007,2.09e-07,145;UBERON:0001555,2.09e-07,145;UBERON:0007026,2.09e-07,145;UBERON:0002114,2.47e-07,2;UBERON:0001043,2.63e-07,3;UBERON:0009143,2.63e-07,3;UBERON:0005409,6.17e-07,25 | |||
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|short_description=p@chr19:42222094..42222107,+ | |||
}} | }} |
Latest revision as of 08:36, 26 July 2015
Short description: | p@chr19:42222094..42222107, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42222094..42222107, + |
Coexpression cluster: | C3797_gastric_colon_somatostatinoma_smallcell_nonsmall_throat_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.08e-19 | 1 |
enteroendocrine cell | 1.08e-19 | 1 |
type D enteroendocrine cell | 1.08e-19 | 1 |
somatostatin secreting cell | 1.08e-19 | 1 |
pancreatic D cell | 1.08e-19 | 1 |
progenitor cell of endocrine pancreas | 1.08e-19 | 1 |
lung fibroblast | 1.88e-19 | 1 |
epithelial cell of stomach | 1.82e-07 | 3 |
epithelial cell of prostate | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
throat | 2.72e-10 | 2 |
open tracheal system trachea | 3.58e-10 | 2 |
subdivision of digestive tract | 3.24e-09 | 118 |
thoracic cavity element | 9.08e-09 | 34 |
thoracic cavity | 9.08e-09 | 34 |
thoracic segment organ | 1.59e-08 | 35 |
digestive system | 2.09e-07 | 145 |
digestive tract | 2.09e-07 | 145 |
primitive gut | 2.09e-07 | 145 |
duodenum | 2.47e-07 | 2 |
esophagus | 2.63e-07 | 3 |
esophageal region | 2.63e-07 | 3 |
gastrointestinal system | 6.17e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.08e-19 | 1 |