FFCP PHASE1:Hg19::chr19:20655841..20655854,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:20655841..20655854,+ | |||
|description=CAGE_peak_at_chr19:20655841..20655854,+ | |description=CAGE_peak_at_chr19:20655841..20655854,+ | ||
|id=chr19:20655841..20655854,+ | |id=chr19:20655841..20655854,+ | ||
|ontology_enrichment_celltype=CL:0000054!3.04e-07!2;CL:0000137!3.04e-07!2;CL:0000092!3.04e-07!2 | |ontology_enrichment_celltype=CL:0000054!3.04e-07!2;CL:0000137!3.04e-07!2;CL:0000092!3.04e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000054;2.07e-10;2!CL:0000137;2.07e-10;2!CL:0000092;2.07e-10;2!CL:0000047;2.85e-10;2!CL:0002178;1.82e-07;3 | |ontology_enrichment_celltype_v019=CL:0000054;2.07e-10;2!CL:0000137;2.07e-10;2!CL:0000092;2.07e-10;2!CL:0000047;2.85e-10;2!CL:0002178;1.82e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.07e-10,2;CL:0000137,2.07e-10,2;CL:0000092,2.07e-10,2;CL:0002178,1.82e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.88e-07;3 | |ontology_enrichment_development_v019=UBERON:0003056;2.88e-07;3 | ||
|ontology_enrichment_disease=DOID:200!3.04e-07!2;DOID:4305!3.04e-07!2;DOID:154!6.19e-07!2;DOID:4236!6.19e-07!2;DOID:3350!9.28e-07!2 | |ontology_enrichment_disease=DOID:200!3.04e-07!2;DOID:4305!3.04e-07!2;DOID:154!6.19e-07!2;DOID:4236!6.19e-07!2;DOID:3350!9.28e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.88e-19;1!DOID:3165;1.88e-19;1!DOID:0060121;1.88e-19;1!DOID:2438;1.88e-19;1!DOID:4418;1.88e-19;1!DOID:200;2.07e-10;2!DOID:4305;2.07e-10;2 | |ontology_enrichment_disease_v019=DOID:0060085;1.88e-19;1!DOID:3165;1.88e-19;1!DOID:0060121;1.88e-19;1!DOID:2438;1.88e-19;1!DOID:4418;1.88e-19;1!DOID:200;2.07e-10;2!DOID:4305;2.07e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.88e-19,1;DOID:3165,1.88e-19,1;DOID:0060121,1.88e-19,1;DOID:2438,1.88e-19,1;DOID:4418,1.88e-19,1;DOID:200,2.07e-10,2;DOID:4305,2.07e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.71e-07!2;UBERON:0002757!1.71e-07!2;UBERON:0010134!1.71e-07!2;UBERON:0002784!1.71e-07!2;UBERON:0005408!1.71e-07!2;UBERON:0001899!1.71e-07!2;UBERON:0002950!4.89e-07!2;UBERON:0001891!4.89e-07!2;UBERON:0009616!4.89e-07!2 | |ontology_enrichment_uberon=UBERON:0001905!1.71e-07!2;UBERON:0002757!1.71e-07!2;UBERON:0010134!1.71e-07!2;UBERON:0002784!1.71e-07!2;UBERON:0005408!1.71e-07!2;UBERON:0001899!1.71e-07!2;UBERON:0002950!4.89e-07!2;UBERON:0001891!4.89e-07!2;UBERON:0009616!4.89e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.82e-37;2!UBERON:0002757;6.82e-37;2!UBERON:0010134;6.82e-37;2!UBERON:0005408;6.82e-37;2!UBERON:0001899;6.82e-37;2!UBERON:0007195;1.08e-19;1!UBERON:0003296;5.15e-19;4!UBERON:0010133;5.15e-19;4!UBERON:0002784;5.15e-19;4!UBERON:0001894;2.69e-11;7!UBERON:0002371;5.00e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001905;6.82e-37;2!UBERON:0002757;6.82e-37;2!UBERON:0010134;6.82e-37;2!UBERON:0005408;6.82e-37;2!UBERON:0001899;6.82e-37;2!UBERON:0007195;1.08e-19;1!UBERON:0003296;5.15e-19;4!UBERON:0010133;5.15e-19;4!UBERON:0002784;5.15e-19;4!UBERON:0001894;2.69e-11;7!UBERON:0002371;5.00e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.94e-37,2;UBERON:0002757,3.94e-37,2;UBERON:0010134,3.94e-37,2;UBERON:0005408,3.94e-37,2;UBERON:0001899,3.94e-37,2;UBERON:0007195,1.08e-19,1;UBERON:0003296,3.92e-19,4;UBERON:0010133,3.92e-19,4;UBERON:0002784,3.92e-19,4;UBERON:0001894,2.30e-11,7;UBERON:0006222,2.30e-11,7 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66821940867821,0,0,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,0,0.392125068635479,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,2.78200456384186,0.0633107959558787,0,0,0,7.59276516412095,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0.157204305099666,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0.499921631848426,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82131652290458,1.68141861109412,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,1.07963795609311,0.47775168788705,1.42953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.237840181555137,0,0,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0,0.169927114687817,0,0,0,0,1.41157948686277,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0.909344378618873,1.33982065078089,0,0.103432995861895,0,0,0.0645889098360061,0,4.59740636580515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:20655841..20655854,+ | |short_description=p@chr19:20655841..20655854,+ | ||
}} | }} |
Latest revision as of 05:37, 26 July 2015
Short description: | p@chr19:20655841..20655854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:20655841..20655854, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.07e-10 | 2 |
osteocyte | 2.07e-10 | 2 |
osteoclast | 2.07e-10 | 2 |
epithelial cell of stomach | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.94e-37 | 2 |
regional part of epithalamus | 3.94e-37 | 2 |
secretory circumventricular organ | 3.94e-37 | 2 |
circumventricular organ | 3.94e-37 | 2 |
epithalamus | 3.94e-37 | 2 |
stroma of bone marrow | 1.08e-19 | 1 |
gland of diencephalon | 3.92e-19 | 4 |
neuroendocrine gland | 3.92e-19 | 4 |
regional part of diencephalon | 3.92e-19 | 4 |
diencephalon | 2.30e-11 | 7 |
future diencephalon | 2.30e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.88e-19 | 1 |
skin benign neoplasm | 1.88e-19 | 1 |
integumentary system benign neoplasm | 1.88e-19 | 1 |
dermis tumor | 1.88e-19 | 1 |
cutaneous fibrous histiocytoma | 1.88e-19 | 1 |
giant cell tumor | 2.07e-10 | 2 |
bone giant cell tumor | 2.07e-10 | 2 |