FFCP PHASE1:Hg19::chr19:11562361..11562386,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:11562361..11562386,-
|short_description=p@chr19:11562361..11562386,-
|description=CAGE_peak_at_chr19:11562361..11562386,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:11562361..11562386,- | |||
|coexpression_cluster_id=C402 | |||
|description=CAGE_peak_at_chr19:11562361..11562386,- | |||
|id=chr19:11562361..11562386,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.49e-18;3!UBERON:0006241;2.19e-17;3!UBERON:0003057;2.19e-17;3!UBERON:0006601;1.93e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.79e-100!57;UBERON:0005068!2.79e-100!57;UBERON:0006241!2.79e-100!57;UBERON:0007135!2.79e-100!57;UBERON:0001017!9.26e-96!82;UBERON:0005743!4.25e-94!86;UBERON:0000073!7.52e-94!94;UBERON:0001016!7.52e-94!94;UBERON:0000955!1.82e-86!69;UBERON:0006238!1.82e-86!69;UBERON:0002616!2.42e-83!59;UBERON:0002780!5.47e-76!41;UBERON:0001890!5.47e-76!41;UBERON:0006240!5.47e-76!41;UBERON:0003080!5.49e-74!42;UBERON:0003075!2.68e-71!86;UBERON:0007284!2.68e-71!86;UBERON:0002020!7.31e-68!34;UBERON:0003528!7.31e-68!34;UBERON:0002346!1.37e-67!90;UBERON:0001893!2.26e-67!34;UBERON:0002791!4.67e-65!33;UBERON:0001869!3.04e-62!32;UBERON:0002619!1.93e-56!22;UBERON:0003056!4.55e-54!61;UBERON:0001950!8.88e-51!20;UBERON:0004121!1.48e-50!169;UBERON:0000956!3.46e-49!25;UBERON:0000203!3.46e-49!25;UBERON:0000924!4.49e-49!173;UBERON:0006601!4.49e-49!173;UBERON:0007023!6.89e-48!115;UBERON:0000033!1.04e-47!123;UBERON:0000153!6.40e-45!129;UBERON:0007811!6.40e-45!129;UBERON:0003076!7.48e-26!15;UBERON:0003057!7.48e-26!15;UBERON:0000025!2.04e-23!194;UBERON:0002420!7.20e-20!9;UBERON:0007245!7.20e-20!9;UBERON:0010009!7.20e-20!9;UBERON:0010011!7.20e-20!9;UBERON:0000454!7.20e-20!9;UBERON:0002308!1.10e-19!9;UBERON:0000125!1.10e-19!9;UBERON:0004733!2.76e-18!12;UBERON:0002028!2.76e-18!12;UBERON:0007277!2.76e-18!12;UBERON:0001871!1.44e-17!7;UBERON:0004111!2.22e-17!241;UBERON:0000200!7.41e-17!6;UBERON:0004732!9.82e-17!13;UBERON:0002298!1.22e-16!8;UBERON:0002021!2.98e-15!5;UBERON:0000349!5.32e-15!5;UBERON:0000483!1.04e-14!309;UBERON:0009663!1.73e-14!7;UBERON:0000119!1.94e-14!312;UBERON:0000475!3.95e-14!365;UBERON:0001872!5.12e-14!5;UBERON:0000477!1.48e-13!286;UBERON:0000064!4.56e-13!219;UBERON:0000369!9.05e-12!4;UBERON:0002435!9.05e-12!4;UBERON:0000204!9.05e-12!4;UBERON:0010082!9.05e-12!4;UBERON:0002680!1.82e-11!9;UBERON:0001895!1.82e-11!9;UBERON:0010092!1.82e-11!9;UBERON:0001894!4.69e-10!7;UBERON:0006222!4.69e-10!7;UBERON:0002240!9.53e-10!3;UBERON:0002771!1.10e-09!3;UBERON:0005383!1.43e-09!3;UBERON:0005382!1.43e-09!3;UBERON:0006331!1.61e-09!3;UBERON:0000988!3.01e-09!3;UBERON:0001896!3.99e-09!3;UBERON:0005290!3.99e-09!3;UBERON:0010096!3.99e-09!3;UBERON:0000922!8.28e-09!612;UBERON:0000923!1.61e-08!604;UBERON:0005291!1.61e-08!604;UBERON:0006598!1.61e-08!604;UBERON:0002532!1.61e-08!604;UBERON:0002050!1.76e-08!605;UBERON:0005423!1.76e-08!605;UBERON:0000062!2.91e-08!511;UBERON:0000467!1.05e-07!625;UBERON:0000480!1.15e-07!626;UBERON:0001954!2.86e-07!2;UBERON:0003022!2.86e-07!2;UBERON:0002421!2.86e-07!2;UBERON:0002600!2.86e-07!2;UBERON:0001876!3.23e-07!2;UBERON:0000481!4.68e-07!347;UBERON:0000468!4.79e-07!659;UBERON:0002148!5.34e-07!2;UBERON:0009662!5.34e-07!2;UBERON:0001897!5.83e-07!2;UBERON:0001873!5.83e-07!2;UBERON:0010122!5.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;4.82e-47;32!UBERON:0003528;5.44e-47;34!UBERON:0002020;5.44e-47;34!UBERON:0002619;2.14e-45;22!UBERON:0001893;3.87e-44;34!UBERON:0001869;2.09e-41;32!UBERON:0000956;8.07e-40;25!UBERON:0000203;8.07e-40;25!UBERON:0000073;2.67e-37;53!UBERON:0002616;2.67e-37;53!UBERON:0002780;6.57e-37;41!UBERON:0001890;6.57e-37;41!UBERON:0001950;1.82e-36;20!UBERON:0001016;1.73e-22;83!UBERON:0001017;2.13e-22;75!UBERON:0002420;8.74e-22;9!UBERON:0007245;8.74e-22;9!UBERON:0010009;8.74e-22;9!UBERON:0010011;8.74e-22;9!UBERON:0000454;8.74e-22;9!UBERON:0000125;1.33e-21;9!UBERON:0002308;1.33e-21;9!UBERON:0000955;1.70e-21;68!UBERON:0002021;7.73e-19;5!UBERON:0000349;1.95e-18;5!UBERON:0002240;2.19e-17;3!UBERON:0005174;2.19e-17;3!UBERON:0001137;2.19e-17;3!UBERON:0004733;2.74e-16;12!UBERON:0002028;2.74e-16;12!UBERON:0002680;1.52e-15;9!UBERON:0001895;1.52e-15;9!UBERON:0004732;5.39e-15;13!UBERON:0001871;2.64e-13;6!UBERON:0009663;6.70e-13;7!UBERON:0001954;1.67e-12;2!UBERON:0003022;1.67e-12;2!UBERON:0002421;1.67e-12;2!UBERON:0002600;1.67e-12;2!UBERON:0001876;2.95e-12;2!UBERON:0002148;5.64e-12;2!UBERON:0002702;5.64e-12;2!UBERON:0006331;5.64e-12;2!UBERON:0009662;5.64e-12;2!UBERON:0011216;2.28e-09;132!UBERON:0002037;3.33e-09;6!UBERON:0000200;5.47e-09;6!UBERON:0007023;9.30e-09;114!UBERON:0002298;9.83e-09;6!UBERON:0005383;1.97e-08;3!UBERON:0005382;1.97e-08;3!UBERON:0000988;2.85e-08;3!UBERON:0001870;2.85e-08;3!UBERON:0010314;8.62e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.91e-77,56;UBERON:0005068,3.91e-77,56;UBERON:0006241,3.91e-77,56;UBERON:0007135,3.91e-77,56;UBERON:0000073,4.64e-65,53;UBERON:0002616,4.64e-65,53;UBERON:0001017,2.10e-63,81;UBERON:0003528,5.75e-60,34;UBERON:0002020,5.75e-60,34;UBERON:0001016,1.27e-56,89;UBERON:0001893,7.50e-54,34;UBERON:0000955,3.07e-53,68;UBERON:0006238,3.07e-53,68;UBERON:0002791,1.67e-51,32;UBERON:0003075,3.40e-51,82;UBERON:0007284,3.40e-51,82;UBERON:0002780,2.53e-49,41;UBERON:0001890,2.53e-49,41;UBERON:0003080,2.53e-49,41;UBERON:0006240,2.53e-49,41;UBERON:0002346,1.41e-48,86;UBERON:0001869,5.42e-46,32;UBERON:0002619,1.67e-45,22;UBERON:0010371,3.04e-42,104;UBERON:0000956,6.47e-40,25;UBERON:0000203,6.47e-40,25;UBERON:0001950,1.49e-36,20;UBERON:0010314,4.20e-32,132;UBERON:0003056,5.20e-32,61;UBERON:0004121,4.32e-29,171;UBERON:0000924,4.32e-29,171;UBERON:0006601,4.32e-29,171;UBERON:0003076,1.20e-28,15;UBERON:0003057,1.20e-28,15;UBERON:0007023,1.87e-25,114;UBERON:0011216,1.56e-22,223;UBERON:0002420,7.02e-22,9;UBERON:0007245,7.02e-22,9;UBERON:0010009,7.02e-22,9;UBERON:0010011,7.02e-22,9;UBERON:0000454,7.02e-22,9;UBERON:0000125,1.31e-21,9;UBERON:0002308,1.31e-21,9;UBERON:0002021,8.28e-19,5;UBERON:0000025,1.05e-18,192;UBERON:0000349,1.36e-18,5;UBERON:0002240,2.83e-17,3;UBERON:0005174,2.83e-17,3;UBERON:0001137,2.83e-17,3;UBERON:0004733,2.43e-16,12;UBERON:0002028,2.43e-16,12;UBERON:0007277,2.43e-16,12;UBERON:0002680,1.50e-15,9;UBERON:0001895,1.50e-15,9;UBERON:0010092,1.50e-15,9;UBERON:0004732,4.82e-15,13;UBERON:0004111,8.29e-14,240;UBERON:0001871,2.22e-13,6;UBERON:0009663,6.92e-13,7;UBERON:0001954,1.58e-12,2;UBERON:0003022,1.58e-12,2;UBERON:0002421,1.58e-12,2;UBERON:0002600,1.58e-12,2;UBERON:0001876,1.98e-12,2;UBERON:0002148,5.19e-12,2;UBERON:0006331,5.19e-12,2;UBERON:0009662,5.19e-12,2;UBERON:0002702,5.49e-12,2;UBERON:0000483,1.63e-10,306;UBERON:0000119,2.36e-10,309;UBERON:0002037,3.42e-09,6;UBERON:0006215,3.42e-09,6;UBERON:0000200,5.63e-09,6;UBERON:0002298,8.48e-09,6;UBERON:0005383,1.86e-08,3;UBERON:0005382,1.86e-08,3;UBERON:0000988,2.70e-08,3;UBERON:0001870,2.80e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31986643833309,0.167516265334349,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,2.53204949538923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,5.98841394003583,0,0,0,0,0,0,1.03423011972439,0,0,4.42870692906919,0.844175070377856,6.10326945268333,2.32216445855572,2.36438095162838,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,1.07841812769083,0,0.937057782901357,0,0,0,0,0,3.36680037793539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87501295673185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,4.22230558945884,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32709321450791,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,2.003054891304,1.72022758707021,0.887432412294818,0.558867626472451,0.138348634936231,0,0,0,0,1.40500471742064,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.323474434190045,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0.192687675289379,5.6678630530234,5.74681892605745,1.43581454968528,5.5455773168778,0.414943514785307,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,1.65349437200947,0.19024743058172,3.28184885410932,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0,0,0.271878931907327,0.460409414939944,0,0,0.078493092850514,1.57115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,2.1593931382644,3.56455680392503,1.2679671827502,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0.271965960763659,7.85431242612679,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97501663675268,0.827463966895162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31986643833309,0.167516265334349,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,2.53204949538923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,5.98841394003583,0,0,0,0,0,0,1.03423011972439,0,0,4.42870692906919,0.844175070377856,6.10326945268333,2.32216445855572,2.36438095162838,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,1.07841812769083,0,0.937057782901357,0,0,0,0,0,3.36680037793539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87501295673185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,4.22230558945884,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32709321450791,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,2.003054891304,1.72022758707021,0.887432412294818,0.558867626472451,0.138348634936231,0,0,0,0,1.40500471742064,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.323474434190045,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0.192687675289379,5.6678630530234,5.74681892605745,1.43581454968528,5.5455773168778,0.414943514785307,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,1.65349437200947,0.19024743058172,3.28184885410932,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0,0,0.271878931907327,0.460409414939944,0,0,0.078493092850514,1.57115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,2.1593931382644,3.56455680392503,1.2679671827502,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0.271965960763659,7.85431242612679,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97501663675268,0.827463966895162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:11562361..11562386,- | |||
}} | }} |
Latest revision as of 03:29, 26 July 2015
Short description: | p@chr19:11562361..11562386, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:11562361..11562386, - |
Coexpression cluster: | C402_parietal_occipital_temporal_thalamus_optic_globus_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data