FFCP PHASE1:Hg19::chr18:77557948..77557968,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:77557948..77557968,+ | |||
|coexpression_cluster_id=C3742 | |||
|description=CAGE_peak_at_chr18:77557948..77557968,+ | |||
|id=chr18:77557948..77557968,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;8.32e-18;3!CL:0002504;2.01e-17;3!CL:1000279;2.01e-17;3!CL:1000280;2.01e-17;3!CL:0002195;5.66e-12;2!CL:0002571;5.66e-12;2!CL:0002549;8.50e-12;2!CL:0002590;6.15e-08;3!CL:0002622;6.15e-08;3!CL:0002032;4.85e-07;1!CL:0000557;4.85e-07;1!CL:0002599;4.85e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,8.57e-18,3;CL:0002504,2.07e-17,3;CL:1000279,2.07e-17,3;CL:1000280,2.07e-17,3;CL:0002195,4.68e-12,2;CL:0002571,4.68e-12,2;CL:0002549,8.98e-12,2;CL:0002622,5.84e-08,3;CL:0002590,7.46e-08,3;CL:0002599,4.58e-07,1;CL:0000192,6.54e-07,43;CL:0000514,6.54e-07,43;CL:0001024,7.60e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.36e-17!115;UBERON:0001017!1.09e-15!82;UBERON:0005743!2.00e-15!86;UBERON:0002616!5.24e-15!59;UBERON:0001049!5.59e-14!57;UBERON:0005068!5.59e-14!57;UBERON:0006241!5.59e-14!57;UBERON:0007135!5.59e-14!57;UBERON:0002619!7.72e-14!22;UBERON:0001893!3.51e-13!34;UBERON:0003075!3.86e-13!86;UBERON:0007284!3.86e-13!86;UBERON:0001869!4.00e-13!32;UBERON:0000073!8.50e-13!94;UBERON:0001016!8.50e-13!94;UBERON:0002791!1.77e-12!33;UBERON:0000955!3.77e-12!69;UBERON:0006238!3.77e-12!69;UBERON:0002346!4.85e-12!90;UBERON:0002780!5.19e-12!41;UBERON:0001890!5.19e-12!41;UBERON:0006240!5.19e-12!41;UBERON:0002020!6.40e-12!34;UBERON:0003528!6.40e-12!34;UBERON:0001950!8.10e-12!20;UBERON:0000956!1.29e-11!25;UBERON:0000203!1.29e-11!25;UBERON:0003080!1.46e-11!42;UBERON:0003056!8.59e-11!61;UBERON:0000153!1.27e-08!129;UBERON:0007811!1.27e-08!129;UBERON:0000033!4.71e-08!123;UBERON:0000119!4.77e-08!312;UBERON:0000483!4.72e-07!309;UBERON:0002200!7.90e-07!11;UBERON:0006876!7.90e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;2.94e-17;5!UBERON:0006876;8.04e-12;11!UBERON:0005629;8.50e-12;2!UBERON:0005358;8.50e-12;2!UBERON:0001886;8.50e-12;2!UBERON:0004086;8.50e-12;2!UBERON:0005282;8.50e-12;2!UBERON:0005281;8.50e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,3.88e-17,5;UBERON:0006876,8.05e-12,11;UBERON:0005629,8.98e-12,2;UBERON:0005358,8.98e-12,2;UBERON:0001886,8.98e-12,2;UBERON:0004086,8.98e-12,2;UBERON:0005282,8.98e-12,2;UBERON:0005281,8.98e-12,2 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,2.64240395401362,0,0,0,0,0,0,0.290796477559129,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.75374599577023,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,2.10707267820062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.327447688744282,0,0,0,0,0,12.4015124638778,4.0039643754609,13.0010125465348,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,1.30769522490767,2.11900398702904,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15585442544872,0,0.125118519871964,0,0,0,0.150238058906597,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,1.30788020649984,0.36669142910475,0,0,0,0,0,0,0,0,2.43062589218851,2.17048642156577,0.823240336780769,0,3.909311436168,5.543663110534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,1.7222167224691,0,2.09799063935079,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.356128142586949,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,1.48863347743867,0,2.09693213316207,0.511795582622668,0,0,0,3.77732160924961,3.0199073270966,4.59468369148177,0,0,0,5.85160486907508,0,0,0.272999822815972,2.54529777516683,0,0,0,0,0,2.62357900818653,0,0,0,0,0.294747123039363,0,0,0,0,0,1.74967360122491,0,0,0,0,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0.191505370132367,0,0,0,0,1.09675927041116,0,0,0.642352300414798,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0.823040347426423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0.482259445395058,0,0,0,0,0.850493793212345,0,0.157611414598396,0.262272940674991,0,0.717149357331379,0,0,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0,1.32506888912221,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,3.04334160082733,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.621051827505038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8374728641192,0.321146125482298,0,0.159633859057151,1.02558182120378,0.252071696221718,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.202612753855184,1.56215619722769,0.620060389503552,0.507326481551255,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0,0.471346769748006,0,0.913158720509496,0,0,0.643288897589907,1.10609528212909,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0,0,0.883889372481891,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p@chr18:77557948..77557968,+ | |||
}} |
Latest revision as of 02:30, 26 July 2015
Short description: | p@chr18:77557948..77557968, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:77557948..77557968, + |
Coexpression cluster: | C3742_Dendritic_granulocyte_Smooth_Mesenchymal_Fibroblast_merkel_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 8.57e-18 | 3 |
enteric smooth muscle cell | 2.07e-17 | 3 |
smooth muscle cell of large intestine | 2.07e-17 | 3 |
smooth muscle cell of colon | 2.07e-17 | 3 |
hepatic stem cell | 4.68e-12 | 2 |
hepatic mesenchymal stem cell | 4.68e-12 | 2 |
fibroblast of choroid plexus | 8.98e-12 | 2 |
prostate stromal cell | 5.84e-08 | 3 |
smooth muscle cell of the brain vasculature | 7.46e-08 | 3 |
smooth muscle cell of the esophagus | 4.58e-07 | 1 |
smooth muscle cell | 6.54e-07 | 43 |
smooth muscle myoblast | 6.54e-07 | 43 |
CD34-positive, CD38-negative hematopoietic stem cell | 7.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 3.88e-17 | 5 |
vasculature of organ | 8.05e-12 | 11 |
vascular plexus | 8.98e-12 | 2 |
ventricle of nervous system | 8.98e-12 | 2 |
choroid plexus | 8.98e-12 | 2 |
brain ventricle | 8.98e-12 | 2 |
ventricular system of brain | 8.98e-12 | 2 |
ventricular system of central nervous system | 8.98e-12 | 2 |