FFCP PHASE1:Hg19::chr18:63273310..63273317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:63273310..63273317,+ | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_at_chr18:63273310..63273317,+ | |||
|id=chr18:63273310..63273317,+ | |||
|ontology_enrichment_celltype=CL:0000319!1.65e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000319;6.62e-41;1!CL:0000159;3.11e-21;2!CL:1000415;3.81e-21;2!CL:0000054;6.30e-21;2!CL:0000137;6.30e-21;2!CL:0000092;6.30e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,6.62e-41,1;CL:0000159,3.11e-21,2;CL:1000415,3.81e-21,2;CL:0000054,6.96e-21,2;CL:0000137,6.96e-21,2;CL:0000092,6.96e-21,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3030!1.65e-10!1;DOID:1036!2.03e-10!8;DOID:0060085!2.37e-10!1;DOID:3165!2.37e-10!1;DOID:0060121!2.37e-10!1;DOID:2438!2.37e-10!1;DOID:4418!2.37e-10!1;DOID:1240!3.04e-10!39;DOID:2531!5.62e-10!51;DOID:0060083!5.62e-10!51;DOID:8692!1.08e-09!31;DOID:201!9.42e-07!6;DOID:0060100!9.42e-07!6;DOID:162!9.99e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3030;6.62e-41;1!DOID:0060085;2.70e-40;1!DOID:3165;2.70e-40;1!DOID:0060121;2.70e-40;1!DOID:2438;2.70e-40;1!DOID:4418;2.70e-40;1!DOID:200;6.30e-21;2!DOID:4305;6.30e-21;2!DOID:0060072;3.60e-11;4!DOID:201;7.01e-08;6!DOID:0060100;7.01e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,6.62e-41,1;DOID:0060085,3.30e-40,1;DOID:3165,3.30e-40,1;DOID:0060121,3.30e-40,1;DOID:2438,3.30e-40,1;DOID:4418,3.30e-40,1;DOID:200,6.96e-21,2;DOID:4305,6.96e-21,2;DOID:0060072,3.79e-11,4;DOID:201,7.25e-08,6;DOID:0060100,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001282!2.16e-10!1;UBERON:0009842!2.16e-10!1;UBERON:0003704!2.16e-10!1;UBERON:0001171!2.16e-10!1;UBERON:0001172!2.16e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.70e-40;1!UBERON:0009842;2.70e-40;1!UBERON:0003704;2.70e-40;1!UBERON:0001171;2.70e-40;1!UBERON:0001172;2.70e-40;1!UBERON:0002294;1.52e-23;7!UBERON:0001173;1.52e-23;7!UBERON:0002110;1.40e-14;3!UBERON:0001280;1.96e-14;3!UBERON:0004647;1.96e-14;3!UBERON:0000014;3.60e-11;4!UBERON:0002394;3.60e-11;4!UBERON:0003928;3.60e-11;4!UBERON:0002423;2.39e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.21e-40,1;UBERON:0009842,2.21e-40,1;UBERON:0003704,2.21e-40,1;UBERON:0001171,2.21e-40,1;UBERON:0001172,2.21e-40,1;UBERON:0002294,1.35e-18,9;UBERON:0001173,1.35e-18,9;UBERON:0004912,1.35e-18,9;UBERON:0002110,1.40e-14,3;UBERON:0006242,1.40e-14,3;UBERON:0001280,1.83e-14,3;UBERON:0004647,1.83e-14,3;UBERON:0005171,1.83e-14,3;UBERON:0000014,3.79e-11,4;UBERON:0002394,6.78e-08,6;UBERON:0003928,6.78e-08,6;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25 | |||
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|short_description=p@chr18:63273310..63273317,+ | |||
}} | }} |
Latest revision as of 01:55, 26 July 2015
Short description: | p@chr18:63273310..63273317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:63273310..63273317, + |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 6.62e-41 | 1 |
seromucus secreting cell | 3.11e-21 | 2 |
epithelial cell of gall bladder | 3.81e-21 | 2 |
bone matrix secreting cell | 6.96e-21 | 2 |
osteocyte | 6.96e-21 | 2 |
osteoclast | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.21e-40 | 1 |
acinus | 2.21e-40 | 1 |
intrahepatic bile duct | 2.21e-40 | 1 |
portal lobule | 2.21e-40 | 1 |
hepatic acinus | 2.21e-40 | 1 |
biliary system | 1.35e-18 | 9 |
biliary tree | 1.35e-18 | 9 |
biliary bud | 1.35e-18 | 9 |
gallbladder | 1.40e-14 | 3 |
gall bladder primordium | 1.40e-14 | 3 |
liver parenchyma | 1.83e-14 | 3 |
liver lobule | 1.83e-14 | 3 |
hepatic duct | 1.83e-14 | 3 |
zone of skin | 3.79e-11 | 4 |
bile duct | 6.78e-08 | 6 |
digestive system duct | 6.78e-08 | 6 |
epithelium of foregut-midgut junction | 2.35e-07 | 25 |
anatomical boundary | 2.35e-07 | 25 |
hepatobiliary system | 2.35e-07 | 25 |
foregut-midgut junction | 2.35e-07 | 25 |
septum transversum | 2.35e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.62e-41 | 1 |
organ system benign neoplasm | 3.30e-40 | 1 |
skin benign neoplasm | 3.30e-40 | 1 |
integumentary system benign neoplasm | 3.30e-40 | 1 |
dermis tumor | 3.30e-40 | 1 |
cutaneous fibrous histiocytoma | 3.30e-40 | 1 |
giant cell tumor | 6.96e-21 | 2 |
bone giant cell tumor | 6.96e-21 | 2 |
benign neoplasm | 3.79e-11 | 4 |
connective tissue cancer | 7.25e-08 | 6 |
musculoskeletal system cancer | 7.25e-08 | 6 |