FFCP PHASE1:Hg19::chr18:27755926..27755936,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:27755926..27755936,- | |||
|coexpression_cluster_id=C3714 | |||
|description=CAGE_peak_at_chr18:27755926..27755936,- | |description=CAGE_peak_at_chr18:27755926..27755936,- | ||
|id=chr18:27755926..27755936,- | |id=chr18:27755926..27755936,- | ||
|ontology_enrichment_celltype=CL:0002541!2.72e-28!3;CL:0000319!8.95e-11!1 | |ontology_enrichment_celltype=CL:0002541!2.72e-28!3;CL:0000319!8.95e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.18e-25;3!CL:0000319;1.18e-19;1!CL:0000054;1.64e-10;2!CL:0000159;1.64e-10;2!CL:0000137;1.64e-10;2!CL:0000092;1.64e-10;2!CL:1000415;2.85e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.64e-25,3;CL:0000319,1.56e-19,1;CL:0000054,1.72e-10,2;CL:0000137,1.72e-10,2;CL:0000092,1.72e-10,2;CL:0000159,1.89e-10,2;CL:1000415,2.49e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!8.14e-11!1;DOID:3165!8.14e-11!1;DOID:0060121!8.14e-11!1;DOID:2438!8.14e-11!1;DOID:4418!8.14e-11!1;DOID:3030!8.95e-11!1;DOID:1799!1.08e-10!1;DOID:10165!1.08e-10!1;DOID:1798!1.08e-10!1;DOID:1036!1.27e-10!8 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.18e-19;1!DOID:3165;1.18e-19;1!DOID:0060121;1.18e-19;1!DOID:2438;1.18e-19;1!DOID:3030;1.18e-19;1!DOID:4418;1.18e-19;1!DOID:1799;3.56e-19;1!DOID:10165;3.56e-19;1!DOID:1798;3.56e-19;1!DOID:200;1.64e-10;2!DOID:4305;1.64e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.30e-19,1;DOID:3165,1.30e-19,1;DOID:0060121,1.30e-19,1;DOID:2438,1.30e-19,1;DOID:4418,1.30e-19,1;DOID:3030,1.56e-19,1;DOID:1799,2.25e-19,1;DOID:10165,2.25e-19,1;DOID:1798,2.25e-19,1;DOID:200,1.72e-10,2;DOID:4305,1.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.72e-28!3;UBERON:0000920!2.72e-28!3;UBERON:0003124!3.41e-21!7;UBERON:0005631!3.46e-16!14;UBERON:0000158!3.46e-16!14;UBERON:0001282!7.40e-11!1;UBERON:0009842!7.40e-11!1;UBERON:0003704!7.40e-11!1;UBERON:0001171!7.40e-11!1;UBERON:0001172!7.40e-11!1;UBERON:0000478!2.16e-09!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.18e-25;3!UBERON:0000920;3.18e-25;3!UBERON:0001282;1.18e-19;1!UBERON:0009842;1.18e-19;1!UBERON:0003704;1.18e-19;1!UBERON:0001171;1.18e-19;1!UBERON:0001172;1.18e-19;1!UBERON:0002294;2.55e-11;7!UBERON:0001173;2.55e-11;7!UBERON:0005631;2.97e-08;10!UBERON:0000158;2.97e-08;10!UBERON:0001280;1.99e-07;3!UBERON:0004647;1.99e-07;3!UBERON:0002110;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.64e-25,3;UBERON:0001282,1.08e-19,1;UBERON:0009842,1.08e-19,1;UBERON:0003704,1.08e-19,1;UBERON:0001171,1.08e-19,1;UBERON:0001172,1.08e-19,1;UBERON:0003124,1.97e-11,7;UBERON:0002294,4.80e-09,9;UBERON:0001173,4.80e-09,9;UBERON:0004912,4.80e-09,9;UBERON:0001280,1.93e-07,3;UBERON:0004647,1.93e-07,3;UBERON:0005171,1.93e-07,3;UBERON:0002110,2.63e-07,3;UBERON:0006242,2.63e-07,3 | |||
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|short_description=p@chr18:27755926..27755936,- | |short_description=p@chr18:27755926..27755936,- | ||
}} | }} |
Latest revision as of 00:16, 26 July 2015
Short description: | p@chr18:27755926..27755936, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:27755926..27755936, - |
Coexpression cluster: | C3714_gall_cholangiocellular_chronic_fibrous_teratocarcinoma_mucinous_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.64e-25 | 3 |
mucus secreting cell | 1.56e-19 | 1 |
bone matrix secreting cell | 1.72e-10 | 2 |
osteocyte | 1.72e-10 | 2 |
osteoclast | 1.72e-10 | 2 |
seromucus secreting cell | 1.89e-10 | 2 |
epithelial cell of gall bladder | 2.49e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.64e-25 | 3 |
intralobular bile duct | 1.08e-19 | 1 |
acinus | 1.08e-19 | 1 |
intrahepatic bile duct | 1.08e-19 | 1 |
portal lobule | 1.08e-19 | 1 |
hepatic acinus | 1.08e-19 | 1 |
chorion | 1.97e-11 | 7 |
biliary system | 4.80e-09 | 9 |
biliary tree | 4.80e-09 | 9 |
biliary bud | 4.80e-09 | 9 |
liver parenchyma | 1.93e-07 | 3 |
liver lobule | 1.93e-07 | 3 |
hepatic duct | 1.93e-07 | 3 |
gallbladder | 2.63e-07 | 3 |
gall bladder primordium | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.30e-19 | 1 |
skin benign neoplasm | 1.30e-19 | 1 |
integumentary system benign neoplasm | 1.30e-19 | 1 |
dermis tumor | 1.30e-19 | 1 |
cutaneous fibrous histiocytoma | 1.30e-19 | 1 |
mucinous adenocarcinoma | 1.56e-19 | 1 |
islet cell tumor | 2.25e-19 | 1 |
endocrine pancreas cancer | 2.25e-19 | 1 |
pancreatic endocrine carcinoma | 2.25e-19 | 1 |
giant cell tumor | 1.72e-10 | 2 |
bone giant cell tumor | 1.72e-10 | 2 |