FFCP PHASE1:Hg19::chr18:13165683..13165695,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:13165683..13165695,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr18:13165683..13165695,- | |description=CAGE_peak_at_chr18:13165683..13165695,- | ||
|id=chr18:13165683..13165695,- | |id=chr18:13165683..13165695,- | ||
|ontology_enrichment_celltype=CL:0000039!6.09e-27!7;CL:0000586!6.09e-27!7;CL:0000242!3.89e-25!2;CL:0002322!2.78e-21!5;CL:0000312!1.21e-10!5;CL:0000240!5.14e-09!6;CL:0000311!5.14e-09!6;CL:0000079!5.14e-09!6;CL:0000237!5.14e-09!6;CL:0000036!5.14e-09!6;CL:0000357!5.14e-09!6;CL:0000114!5.14e-09!6;CL:0002535!2.28e-07!2;CL:0000362!5.71e-07!8 | |ontology_enrichment_celltype=CL:0000039!6.09e-27!7;CL:0000586!6.09e-27!7;CL:0000242!3.89e-25!2;CL:0002322!2.78e-21!5;CL:0000312!1.21e-10!5;CL:0000240!5.14e-09!6;CL:0000311!5.14e-09!6;CL:0000079!5.14e-09!6;CL:0000237!5.14e-09!6;CL:0000036!5.14e-09!6;CL:0000357!5.14e-09!6;CL:0000114!5.14e-09!6;CL:0002535!2.28e-07!2;CL:0000362!5.71e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.99e-131;2!CL:0000242;8.99e-131;2!CL:0000312;2.87e-53;5!CL:0000240;1.22e-44;6!CL:0000311;1.22e-44;6!CL:0000079;1.22e-44;6!CL:0000237;1.22e-44;6!CL:0002535;5.04e-34;2!CL:0000362;3.09e-30;9!CL:0002159;6.48e-20;14!CL:0000095;5.27e-15;17!CL:0002319;6.56e-11;25!CL:0002077;1.25e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.99e-131,2;CL:0000312,2.87e-53,5;CL:0000240,1.22e-44,6;CL:0000311,1.22e-44,6;CL:0000079,1.22e-44,6;CL:0000237,1.22e-44,6;CL:0000036,1.22e-44,6;CL:0000357,1.22e-44,6;CL:0000114,1.22e-44,6;CL:0002535,5.04e-34,2;CL:0000362,3.09e-30,9;CL:0002159,6.48e-20,14;CL:0000095,5.27e-15,17;CL:0000123,5.27e-15,17;CL:0002319,6.56e-11,25;CL:0002077,6.80e-09,34;CL:0000333,2.95e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000357;1.22e-44;6!CL:0000114;1.22e-44;6 | |||
|ontology_enrichment_disease=DOID:3095!7.64e-19!22;DOID:2994!7.64e-19!22;DOID:0050619!7.68e-13!1;DOID:1357!7.68e-13!1;DOID:5093!7.70e-13!4;DOID:1612!7.70e-13!4;DOID:305!4.30e-12!106;DOID:0050687!2.72e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:4362;1.60e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.60e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.58e-14!8;UBERON:0001764!7.68e-13!1;UBERON:0001825!7.68e-13!1;UBERON:0003135!2.85e-10!11;UBERON:0000991!3.03e-09!21;UBERON:0009196!3.03e-09!21;UBERON:0009117!3.03e-09!21;UBERON:0005564!3.03e-09!21;UBERON:0004176!7.81e-09!22;UBERON:0006955!2.28e-07!2;UBERON:0004801!2.28e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.04e-34;2!UBERON:0004801;5.04e-34;2!UBERON:0001003;1.13e-18;15!UBERON:0007376;1.13e-18;15!UBERON:0000002;2.45e-12;6!UBERON:0001560;2.45e-12;6!UBERON:0010371;2.80e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.04e-34,2;UBERON:0004801,5.04e-34,2;UBERON:0001003,1.13e-18,15;UBERON:0007376,1.13e-18,15;UBERON:0007383,1.13e-18,15;UBERON:0000002,2.45e-12,6;UBERON:0001560,2.45e-12,6;UBERON:0002097,1.47e-07,41;UBERON:0002199,7.52e-07,46;UBERON:0002416,7.52e-07,46 | |||
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|short_description=p@chr18:13165683..13165695,- | |short_description=p@chr18:13165683..13165695,- | ||
}} | }} |
Latest revision as of 23:43, 25 July 2015
Short description: | p@chr18:13165683..13165695, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:13165683..13165695, - |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.99e-131 | 2 |
keratinocyte | 2.87e-53 | 5 |
stratified squamous epithelial cell | 1.22e-44 | 6 |
keratin accumulating cell | 1.22e-44 | 6 |
stratified epithelial cell | 1.22e-44 | 6 |
keratinizing barrier epithelial cell | 1.22e-44 | 6 |
epithelial fate stem cell | 1.22e-44 | 6 |
stratified epithelial stem cell | 1.22e-44 | 6 |
surface ectodermal cell | 1.22e-44 | 6 |
epithelial cell of cervix | 5.04e-34 | 2 |
epidermal cell | 3.09e-30 | 9 |
general ecto-epithelial cell | 6.48e-20 | 14 |
neuron associated cell | 5.27e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 5.27e-15 | 17 |
neural cell | 6.56e-11 | 25 |
ecto-epithelial cell | 6.80e-09 | 34 |
migratory neural crest cell | 2.95e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.04e-34 | 2 |
cervix epithelium | 5.04e-34 | 2 |
skin epidermis | 1.13e-18 | 15 |
outer epithelium | 1.13e-18 | 15 |
enveloping layer of ectoderm | 1.13e-18 | 15 |
uterine cervix | 2.45e-12 | 6 |
neck of organ | 2.45e-12 | 6 |
skin of body | 1.47e-07 | 41 |
integument | 7.52e-07 | 46 |
integumental system | 7.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.60e-14 | 5 |