FFCP PHASE1:Hg19::chr17:77743943..77743968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:77743943..77743968,- | |||
|coexpression_cluster_id=C3695 | |coexpression_cluster_id=C3695 | ||
|description=CAGE_peak_at_chr17:77743943..77743968,- | |description=CAGE_peak_at_chr17:77743943..77743968,- | ||
|id=chr17:77743943..77743968,- | |id=chr17:77743943..77743968,- | ||
|ontology_enrichment_celltype=CL:0002150!2.61e-20!3;CL:0000861!2.61e-20!3;CL:0000066!4.32e-08!254;CL:0000319!7.97e-08!1 | |ontology_enrichment_celltype=CL:0002150!2.61e-20!3;CL:0000861!2.61e-20!3;CL:0000066!4.32e-08!254;CL:0000319!7.97e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000319;4.91e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,4.44e-11,1;CL:0000066,7.48e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.03e-47;29 | |||
|ontology_enrichment_disease=DOID:305!6.03e-23!106;DOID:0050687!1.49e-21!143;DOID:162!2.98e-15!235;DOID:14566!7.86e-15!239;DOID:3030!7.97e-08!1;DOID:4235!1.75e-07!1;DOID:1324!4.25e-07!15 | |ontology_enrichment_disease=DOID:305!6.03e-23!106;DOID:0050687!1.49e-21!143;DOID:162!2.98e-15!235;DOID:14566!7.86e-15!239;DOID:3030!7.97e-08!1;DOID:4235!1.75e-07!1;DOID:1324!4.25e-07!15 | ||
|ontology_enrichment_disease_v019=DOID:3030;4.91e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.24e-21,106;DOID:0050687,1.41e-17,143;DOID:162,2.77e-14,235;DOID:14566,6.23e-14,239;DOID:3030,4.44e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.87e-59!9;UBERON:0001557!3.05e-33!19;UBERON:0008947!3.99e-31!38;UBERON:0003258!3.99e-31!38;UBERON:0000072!4.96e-29!46;UBERON:0000065!8.44e-25!53;UBERON:0001041!7.63e-18!98;UBERON:0001004!1.85e-17!72;UBERON:0000077!1.48e-12!130;UBERON:0004921!1.48e-12!129;UBERON:0004185!1.48e-12!129;UBERON:0000063!3.46e-12!97;UBERON:0001007!3.68e-11!155;UBERON:0001555!3.68e-11!155;UBERON:0007026!3.68e-11!155;UBERON:0004119!6.29e-10!169;UBERON:0000925!6.29e-10!169;UBERON:0006595!6.29e-10!169;UBERON:0001048!9.07e-08!168 | |ontology_enrichment_uberon=UBERON:0001737!9.87e-59!9;UBERON:0001557!3.05e-33!19;UBERON:0008947!3.99e-31!38;UBERON:0003258!3.99e-31!38;UBERON:0000072!4.96e-29!46;UBERON:0000065!8.44e-25!53;UBERON:0001041!7.63e-18!98;UBERON:0001004!1.85e-17!72;UBERON:0000077!1.48e-12!130;UBERON:0004921!1.48e-12!129;UBERON:0004185!1.48e-12!129;UBERON:0000063!3.46e-12!97;UBERON:0001007!3.68e-11!155;UBERON:0001555!3.68e-11!155;UBERON:0007026!3.68e-11!155;UBERON:0004119!6.29e-10!169;UBERON:0000925!6.29e-10!169;UBERON:0006595!6.29e-10!169;UBERON:0001048!9.07e-08!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.79e-89;9!UBERON:0001557;9.79e-89;9!UBERON:0000072;7.10e-33;37!UBERON:0000065;6.28e-27;44!UBERON:0001004;2.34e-11;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.31e-89,9;UBERON:0001557,1.54e-41,19;UBERON:0008947,5.15e-36,38;UBERON:0003258,5.15e-36,38;UBERON:0000072,8.59e-29,47;UBERON:0000065,7.78e-25,54;UBERON:0001004,1.21e-17,74;UBERON:0001041,9.76e-15,87;UBERON:0004921,2.80e-10,118;UBERON:0001007,4.95e-08,145;UBERON:0001555,4.95e-08,145;UBERON:0007026,4.95e-08,145;UBERON:0001048,3.64e-07,160;UBERON:0004119,4.15e-07,160;UBERON:0000925,4.15e-07,160;UBERON:0006595,4.15e-07,160 | |||
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|short_description=p@chr17:77743943..77743968,- | |short_description=p@chr17:77743943..77743968,- | ||
}} | }} |
Latest revision as of 22:24, 25 July 2015
Short description: | p@chr17:77743943..77743968, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77743943..77743968, - |
Coexpression cluster: | C3695_large_glioblastoma_Hep2_mesothelioma_cervical_epitheloid_mucinous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 4.44e-11 | 1 |
epithelial cell | 7.48e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.31e-89 | 9 |
upper respiratory tract | 1.54e-41 | 19 |
respiratory primordium | 5.15e-36 | 38 |
endoderm of foregut | 5.15e-36 | 38 |
segment of respiratory tract | 8.59e-29 | 47 |
respiratory tract | 7.78e-25 | 54 |
respiratory system | 1.21e-17 | 74 |
foregut | 9.76e-15 | 87 |
subdivision of digestive tract | 2.80e-10 | 118 |
digestive system | 4.95e-08 | 145 |
digestive tract | 4.95e-08 | 145 |
primitive gut | 4.95e-08 | 145 |
primordium | 3.64e-07 | 160 |
endoderm-derived structure | 4.15e-07 | 160 |
endoderm | 4.15e-07 | 160 |
presumptive endoderm | 4.15e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.24e-21 | 106 |
cell type cancer | 1.41e-17 | 143 |
cancer | 2.77e-14 | 235 |
disease of cellular proliferation | 6.23e-14 | 239 |
mucinous adenocarcinoma | 4.44e-11 | 1 |