FFCP PHASE1:Hg19::chr17:73539339..73539343,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73539339..73539343,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_at_chr17:73539339..73539343,+ | |description=CAGE_peak_at_chr17:73539339..73539343,+ | ||
|id=chr17:73539339..73539343,+ | |id=chr17:73539339..73539343,+ | ||
|ontology_enrichment_celltype=CL:0000313!9.57e-12!1 | |ontology_enrichment_celltype=CL:0000313!9.57e-12!1 | ||
|ontology_enrichment_celltype_v019=CL:0000313;3.10e-50;1!CL:0000159;6.30e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.42e-50,1;CL:0000159,5.56e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.32e-26;2!UBERON:0003918;9.93e-21;10!UBERON:0007687;9.93e-21;10!UBERON:0003104;1.23e-07;31 | |||
|ontology_enrichment_disease=DOID:2152!9.57e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;3.10e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.42e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!9.57e-15!11;UBERON:0006947!1.41e-14!3;UBERON:0004054!1.41e-14!3;UBERON:0001301!8.62e-12!1;UBERON:0004911!9.57e-12!1;UBERON:0001000!2.42e-11!1;UBERON:0005352!2.42e-11!1;UBERON:0001154!2.68e-11!1;UBERON:0001153!2.68e-11!1;UBERON:0005904!3.64e-11!4;UBERON:0004907!5.28e-09!5;UBERON:0000160!6.68e-09!27;UBERON:0000059!7.99e-09!11;UBERON:0003101!1.81e-07!22;UBERON:0000079!1.81e-07!22;UBERON:0003133!4.01e-07!48;UBERON:0005409!6.91e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.46e-50;1!UBERON:0004911;3.10e-50;1!UBERON:0004909;6.30e-26;2!UBERON:0006947;6.76e-18;3!UBERON:0004054;6.76e-18;3!UBERON:0005904;8.82e-14;4!UBERON:0002113;2.72e-09;24!UBERON:0011143;2.72e-09;24!UBERON:0000489;7.27e-08;29!UBERON:0006554;1.23e-07;30!UBERON:0001008;1.23e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.46e-50,1;UBERON:0004911,2.42e-50,1;UBERON:0004909,5.56e-26,2;UBERON:0002113,5.50e-18,26;UBERON:0003918,5.50e-18,26;UBERON:0011143,5.50e-18,26;UBERON:0005095,5.50e-18,26;UBERON:0007687,5.50e-18,26;UBERON:0006947,6.76e-18,3;UBERON:0004054,6.76e-18,3;UBERON:0000489,3.01e-15,31;UBERON:0005904,8.82e-14,4;UBERON:0006554,2.24e-10,47;UBERON:0001008,3.53e-10,48;UBERON:0005172,3.82e-09,54;UBERON:0005173,3.82e-09,54;UBERON:0002417,2.58e-08,60;UBERON:0000916,2.58e-08,60;UBERON:0005103,1.49e-07,8;UBERON:0000083,1.49e-07,8;UBERON:0009201,1.49e-07,8;UBERON:0006553,1.49e-07,8;UBERON:0003074,1.49e-07,8;UBERON:0003060,1.49e-07,8;UBERON:0003103,1.96e-07,68;UBERON:0000080,7.48e-07,9;UBERON:0002120,7.48e-07,9;UBERON:0004875,7.48e-07,9;UBERON:0005721,7.48e-07,9;UBERON:0005754,7.48e-07,9;UBERON:0007297,7.48e-07,9 | |||
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|short_description=p@chr17:73539339..73539343,+ | |short_description=p@chr17:73539339..73539343,+ | ||
}} | }} |
Latest revision as of 21:08, 25 July 2015
Short description: | p@chr17:73539339..73539343, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73539339..73539343, + |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.42e-50 | 1 |
seromucus secreting cell | 5.56e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.46e-50 | 1 |
epithelium of female gonad | 2.42e-50 | 1 |
epithelium of gonad | 5.56e-26 | 2 |
kidney | 5.50e-18 | 26 |
kidney mesenchyme | 5.50e-18 | 26 |
upper urinary tract | 5.50e-18 | 26 |
kidney rudiment | 5.50e-18 | 26 |
kidney field | 5.50e-18 | 26 |
male genital duct | 6.76e-18 | 3 |
internal male genitalia | 6.76e-18 | 3 |
cavitated compound organ | 3.01e-15 | 31 |
duct of male reproductive system | 8.82e-14 | 4 |
urinary system structure | 2.24e-10 | 47 |
renal system | 3.53e-10 | 48 |
abdomen element | 3.82e-09 | 54 |
abdominal segment element | 3.82e-09 | 54 |
abdominal segment of trunk | 2.58e-08 | 60 |
abdomen | 2.58e-08 | 60 |
mesonephric epithelium | 1.49e-07 | 8 |
mesonephric tubule | 1.49e-07 | 8 |
nephric duct | 1.49e-07 | 8 |
renal duct | 1.49e-07 | 8 |
mesonephric duct | 1.49e-07 | 8 |
pronephric duct | 1.49e-07 | 8 |
compound organ | 1.96e-07 | 68 |
mesonephros | 7.48e-07 | 9 |
pronephros | 7.48e-07 | 9 |
nephrogenic cord | 7.48e-07 | 9 |
pronephric mesoderm | 7.48e-07 | 9 |
rostral part of nephrogenic cord | 7.48e-07 | 9 |
presumptive pronephric mesoderm | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.42e-50 | 1 |