FFCP PHASE1:Hg19::chr17:61116852..61116863,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_AB074278_5end | |association_with_transcript=21bp_to_AB074278_5end | ||
|cluster_id=chr17:61116852..61116863,+ | |||
|coexpression_cluster_id=C2426 | |coexpression_cluster_id=C2426 | ||
|description=CAGE_peak_4_at_AB074278_5end | |description=CAGE_peak_4_at_AB074278_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000242!3.24e-09!2 | |ontology_enrichment_celltype=CL:0000242!3.24e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0000312;2.66e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000362;7.48e-07;9!CL:0000062;8.37e-07;9 | |ontology_enrichment_celltype_v019=CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0000312;2.66e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000362;7.48e-07;9!CL:0000062;8.37e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.32e-26,2;CL:0000312,2.66e-11,5;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6;CL:0000362,7.48e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | |ontology_enrichment_development_v019=CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p4@AB074278 | |short_description=p4@AB074278 | ||
}} | }} |
Latest revision as of 19:41, 25 July 2015
Short description: | p4@AB074278 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AB074278_5end |
Coexpression cluster: | C2426_pons_merkel_Saos2_Dendritic_locus_medulla_parietal |
Association with transcript: | 21bp_to_AB074278_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.32e-26 | 2 |
keratinocyte | 2.66e-11 | 5 |
stratified squamous epithelial cell | 1.22e-09 | 6 |
keratin accumulating cell | 1.22e-09 | 6 |
stratified epithelial cell | 1.22e-09 | 6 |
keratinizing barrier epithelial cell | 1.22e-09 | 6 |
epithelial fate stem cell | 1.22e-09 | 6 |
stratified epithelial stem cell | 1.22e-09 | 6 |
surface ectodermal cell | 1.22e-09 | 6 |
epidermal cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 7.14e-26 | 2 |
pons | 8.00e-18 | 3 |
gland of diencephalon | 1.13e-13 | 4 |
neuroendocrine gland | 1.13e-13 | 4 |
brainstem | 1.32e-09 | 6 |
diencephalon | 2.18e-08 | 7 |
future diencephalon | 2.18e-08 | 7 |
regional part of metencephalon | 7.91e-07 | 9 |
metencephalon | 7.91e-07 | 9 |
future metencephalon | 7.91e-07 | 9 |