FFCP PHASE1:Hg19::chr17:48266311..48266336,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:48266311..48266336,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48266311..48266336,+ | |||
|id=chr17:48266311..48266336,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.99e-28!180;CL:0000057!5.32e-22!75;CL:0000048!3.94e-15!430;CL:0000723!2.75e-14!436;CL:0000034!3.29e-13!444;CL:0000183!2.92e-12!59;CL:0002371!1.27e-11!591;CL:0000680!2.83e-11!57;CL:0000056!2.83e-11!57;CL:0000355!2.83e-11!57;CL:0000144!7.26e-11!625;CL:0000187!7.30e-11!54;CL:0002620!2.91e-10!23;CL:0002320!2.05e-09!365;CL:0000393!2.77e-09!60;CL:0000211!2.77e-09!60;CL:0002570!4.13e-08!8;CL:0000134!1.23e-07!358;CL:0002334!2.58e-07!12;CL:0000192!2.99e-07!42;CL:0000514!2.99e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.13e-12;55!CL:0002570;4.29e-12;8!CL:0000048;5.74e-11;58!CL:0002620;4.13e-10;23!CL:0002569;1.03e-09;6!CL:0002334;1.28e-09;12!CL:0000723;3.77e-09;61!CL:0002320;1.51e-08;188!CL:0000499;1.66e-08;28!CL:0000034;2.99e-08;69!CL:0000349;5.51e-08;19!CL:0000057;1.30e-07;73!CL:0000135;8.36e-07;3!CL:0000388;8.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.76e-21,76;CL:0000048,8.06e-15,427;CL:0000723,3.06e-14,433;CL:0002320,1.16e-13,361;CL:0000034,1.70e-13,441;CL:0002570,4.65e-12,8;CL:0000134,4.74e-12,354;CL:0000219,1.48e-10,386;CL:0002620,4.55e-10,23;CL:0002334,1.10e-09,12;CL:0002569,1.46e-09,6;CL:0000499,1.27e-08,28;CL:0000349,7.56e-08,19;CL:0000136,7.02e-07,15;CL:0000135,8.41e-07,3;CL:0000388,8.41e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.78e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:17;1.91e-08;5!DOID:450;1.91e-08;5!DOID:66;1.91e-08;5!DOID:423;1.91e-08;5!DOID:0080000;1.91e-08;5!DOID:11722;1.91e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.56e-08,5;DOID:450,1.56e-08,5;DOID:66,1.56e-08,5;DOID:423,1.56e-08,5;DOID:0080000,1.56e-08,5;DOID:11722,1.56e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.46e-13!83;UBERON:0002329!1.46e-13!83;UBERON:0003077!1.46e-13!83;UBERON:0003059!1.46e-13!83;UBERON:0007282!1.46e-13!83;UBERON:0009618!1.46e-13!83;UBERON:0007285!1.46e-13!83;UBERON:0001134!1.32e-11!61;UBERON:0002036!1.32e-11!61;UBERON:0003082!1.32e-11!61;UBERON:0002385!1.69e-11!63;UBERON:0001015!1.69e-11!63;UBERON:0000383!1.69e-11!63;UBERON:0004290!2.88e-11!70;UBERON:0002384!1.86e-09!375;UBERON:0000486!3.24e-09!82;UBERON:0001013!1.08e-08!14;UBERON:0005256!2.09e-07!143;UBERON:0002199!4.80e-07!45;UBERON:0002416!4.80e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.58e-12;14!UBERON:0003104;2.53e-11;7!UBERON:0009142;2.53e-11;7!UBERON:0003422;1.03e-09;6!UBERON:0002384;9.54e-09;198!UBERON:0004457;2.61e-08;9!UBERON:0000042;2.61e-08;9!UBERON:0002331;1.66e-07;10!UBERON:0000478;3.83e-07;24!UBERON:0003688;4.12e-07;6!UBERON:0002358;4.12e-07;6!UBERON:0003684;4.12e-07;6!UBERON:0001178;4.12e-07;6!UBERON:0007846;8.36e-07;3!UBERON:0000043;8.36e-07;3!UBERON:0007845;8.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.51e-13,371;UBERON:0001013,8.44e-12,14;UBERON:0003422,1.46e-09,6;UBERON:0002199,3.54e-08,46;UBERON:0002416,3.54e-08,46;UBERON:0002331,2.16e-07,10;UBERON:0000358,2.16e-07,10;UBERON:0000307,2.16e-07,10;UBERON:0000091,2.16e-07,10;UBERON:0000087,2.16e-07,10;UBERON:0007010,2.16e-07,10;UBERON:0007806,2.16e-07,10;UBERON:0008780,2.16e-07,10;UBERON:0005728,2.16e-07,10;UBERON:0003102,3.11e-07,99;UBERON:0003688,4.60e-07,6;UBERON:0002358,4.60e-07,6;UBERON:0003684,4.60e-07,6;UBERON:0001178,4.60e-07,6;UBERON:0000478,5.08e-07,24;UBERON:0007846,8.41e-07,3;UBERON:0000043,8.41e-07,3;UBERON:0007845,8.41e-07,3;UBERON:0002097,9.84e-07,41 | |||
|phase1_expression=2.18014055124668,2.99740733447376,2.67813367782345,2.00146596706261,5.81049422755474,2.61701557230111,2.53299878168311,0.631719873426831,0,0.245733936501509,0,0.218441372130172,1.31883489114227,0.618831764800233,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.492484232307152,1.83600622119828,1.56727360739044,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,2.9408389224012,5.42158728576849,0,3.91085601194224,0,2.43317435151318,0.0945348171640679,0.886917589850256,0.702678285545008,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9515512271251,2.65924074495618,1.05927344650575,10.0392817262085,0,0.560677600142307,0,4.19334832309172,0,0.538842688278752,0.490385709340376,0.908144565869588,0.576175924479999,0.468642863667593,0,0,0.597794722207204,0,0.161872944368132,0.280901613404497,0,0.491337269247072,0.309977343527296,2.37600571456411,8.15980866619238,0,2.87447256726495,0,0.125118519871964,0,0.438977620880838,5.21029252858333,1.95309476578576,1.24775401476023,5.38168907066586,5.97960688691989,2.7551147150743,7.50227740211006,1.33968288009971,6.95629458123199,1.8611685633159,3.20675031258406,1.36411807225678,3.28163906517349,1.19664868234989,1.13152239773168,6.03516307278244,1.10827308050404,0.847802961552438,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,5.3504621473082,5.88034845542168,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0,0.4400297149257,1.16344544182,7.15312891703765,2.535908257668,3.19125739901845,1.04007436911366,0.514414748524284,0,1.5985330740966,3.14551586047925,10.3098105024374,2.46972101034231,1.30294473717494,8.17401482107855,2.37585561880029,0,0,0.099972991182057,0,0,0,4.31324739884849,6.89171615004683,0,0.434343920002738,1.2328579353023,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,3.50119364741774,1.08506009479894,10.1905722150095,9.8135943838439,7.56971592162886,0.585707074963566,0,0,0,2.65690239414175,0.737476674166813,0.868836144680828,1.17480694477644,6.17658162859541,0,0,0,0.606255142892519,4.99306318531491,3.93107381328584,3.72161711728165,2.76231551918512,9.26178311629143,4.86928767171664,0,7.23842645146234,2.96836132889982,1.3878872442239,2.48586415438378,0.574890092096664,0,2.09178681227927,0,0,0,1.95184561879831,4.00600569614778,1.96686622439136,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0.366277859273374,0.660075999364704,0,0,0,0.386682873168488,1.07834031980251,0.921022048356777,0.413509717453592,0.859361958946189,0.580066775656914,0.426133137080504,5.69805028139119,0.165284915360978,0,0,0,0.929691098594572,12.5924938732256,0,1.54016790088044,0,0,0.18532421910392,0.143124886741991,0,0.632758849437452,2.85945290885737,0.767693373934002,0,0.318203247925937,0.78494864019923,0.719489830333259,2.19629623788844,1.64937363283961,0,0,0.842516912477962,0.48763373908959,0.243713489631284,1.05650146756755,2.04749867111979,5.23200098228737,2.26016233240486,0,0,0,0,1.31178950409327,0,0.30982349809975,0,1.00387946542836,3.7334635584986,0,0.709522128141196,2.74439925886963,2.30506425071931,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,2.79935628895627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0,0,2.93774963014692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,1.28929632425987,0,0.279282401272254,0,0,0,0,0,0.335917362433631,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28360566351123,5.14169281663894,4.43844689202091,1.51522404220071,1.76097531226803,0.889811221596536,0.228840068396924,2.87338755150154,2.95330681107283,0.591420599958536,0.955780602982214,0.449803112163605,0.310525913752519,2.07353103920428,2.12673371646396,1.04349012362347,5.10875870590543,1.14241563650639,0.406870733204662,0.909243296012797,1.8259794697223,1.85613503951397,0.796191777397232,1.20008329398946,1.71697852591396,3.03074539889327,0,0,0,0,0.680117776536817,0.231522474323834,0,0.179088841081487,0,0.657852148736121,0,0.38582807654183,0,0,0,0.303859956177382,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,3.4980478571876,0.0788617450012534,0,7.05351887381368,1.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| |||
|short_description=p@chr17:48266311..48266336,+ | |||
}} |
Latest revision as of 18:34, 25 July 2015
Short description: | p@chr17:48266311..48266336, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48266311..48266336, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.76e-21 | 76 |
multi fate stem cell | 8.06e-15 | 427 |
somatic stem cell | 3.06e-14 | 433 |
connective tissue cell | 1.16e-13 | 361 |
stem cell | 1.70e-13 | 441 |
mesenchymal stem cell of adipose | 4.65e-12 | 8 |
mesenchymal cell | 4.74e-12 | 354 |
motile cell | 1.48e-10 | 386 |
skin fibroblast | 4.55e-10 | 23 |
preadipocyte | 1.10e-09 | 12 |
mesenchymal stem cell of umbilical cord | 1.46e-09 | 6 |
stromal cell | 1.27e-08 | 28 |
extraembryonic cell | 7.56e-08 | 19 |
fat cell | 7.02e-07 | 15 |
fibrocyte | 8.41e-07 | 3 |
tendon cell | 8.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.51e-13 | 371 |
adipose tissue | 8.44e-12 | 14 |
mesenchyme of umbilical cord | 1.46e-09 | 6 |
integument | 3.54e-08 | 46 |
integumental system | 3.54e-08 | 46 |
umbilical cord | 2.16e-07 | 10 |
blastocyst | 2.16e-07 | 10 |
blastula | 2.16e-07 | 10 |
bilaminar disc | 2.16e-07 | 10 |
inner cell mass | 2.16e-07 | 10 |
cleaving embryo | 2.16e-07 | 10 |
connecting stalk | 2.16e-07 | 10 |
inner cell mass derived epiblast | 2.16e-07 | 10 |
extraembryonic mesoderm | 2.16e-07 | 10 |
surface structure | 3.11e-07 | 99 |
omentum | 4.60e-07 | 6 |
peritoneum | 4.60e-07 | 6 |
abdominal cavity | 4.60e-07 | 6 |
visceral peritoneum | 4.60e-07 | 6 |
extraembryonic structure | 5.08e-07 | 24 |
dense regular connective tissue | 8.41e-07 | 3 |
tendon | 8.41e-07 | 3 |
regular connective tissue | 8.41e-07 | 3 |
skin of body | 9.84e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.56e-08 | 5 |
myotonic disease | 1.56e-08 | 5 |
muscle tissue disease | 1.56e-08 | 5 |
myopathy | 1.56e-08 | 5 |
muscular disease | 1.56e-08 | 5 |
myotonic dystrophy | 1.56e-08 | 5 |