FFCP PHASE1:Hg19::chr17:47092049..47092091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:47092049..47092091,+ | |||
|coexpression_cluster_id=C312 | |coexpression_cluster_id=C312 | ||
|description=CAGE_peak_at_chr17:47092049..47092091,+ | |description=CAGE_peak_at_chr17:47092049..47092091,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.15e-15;2 | |ontology_enrichment_celltype_v019=CL:1000415;1.15e-15;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.15e-15,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4929;1.33e-15;2!DOID:3119;4.21e-09;14 | |ontology_enrichment_disease_v019=DOID:4929;1.33e-15;2!DOID:3119;4.21e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,1.33e-15,2;DOID:3119,3.88e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.19e-09!8;UBERON:0003135!5.05e-07!11 | |ontology_enrichment_uberon=UBERON:0000473!1.19e-09!8;UBERON:0003135!5.05e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;9.98e-30;1!UBERON:0003703;9.98e-30;1!UBERON:0001174;9.98e-30;1!UBERON:0004914;9.98e-30;1!UBERON:0002294;2.46e-17;7!UBERON:0001173;2.46e-17;7!UBERON:0002423;5.65e-11;25!UBERON:0002110;6.73e-11;3!UBERON:0002114;7.42e-11;2!UBERON:0002394;1.82e-08;4!UBERON:0003928;1.82e-08;4!UBERON:0002346;2.26e-08;4!UBERON:0000923;2.26e-08;4!UBERON:0010316;2.26e-08;4!UBERON:0005291;2.26e-08;4!UBERON:0002108;5.08e-07;4!UBERON:0002050;6.04e-07;5!UBERON:0005423;6.04e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0004913;9.98e-30;1!UBERON:0003703;9.98e-30;1!UBERON:0001174;9.98e-30;1!UBERON:0004914;9.98e-30;1!UBERON:0002294;2.46e-17;7!UBERON:0001173;2.46e-17;7!UBERON:0002423;5.65e-11;25!UBERON:0002110;6.73e-11;3!UBERON:0002114;7.42e-11;2!UBERON:0002394;1.82e-08;4!UBERON:0003928;1.82e-08;4!UBERON:0002346;2.26e-08;4!UBERON:0000923;2.26e-08;4!UBERON:0010316;2.26e-08;4!UBERON:0005291;2.26e-08;4!UBERON:0002108;5.08e-07;4!UBERON:0002050;6.04e-07;5!UBERON:0005423;6.04e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,9.99e-30,1;UBERON:0003703,9.99e-30,1;UBERON:0001174,9.99e-30,1;UBERON:0004914,9.99e-30,1;UBERON:0002294,1.02e-13,9;UBERON:0001173,1.02e-13,9;UBERON:0004912,1.02e-13,9;UBERON:0009497,5.46e-11,25;UBERON:0000015,5.46e-11,25;UBERON:0002423,5.46e-11,25;UBERON:0006235,5.46e-11,25;UBERON:0004161,5.46e-11,25;UBERON:0002110,6.73e-11,3;UBERON:0006242,6.73e-11,3;UBERON:0002114,7.42e-11,2;UBERON:0002108,5.08e-07,4 | |||
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| ||
|short_description=p@chr17:47092049..47092091,+ | |short_description=p@chr17:47092049..47092091,+ | ||
}} | }} |
Latest revision as of 18:17, 25 July 2015
Short description: | p@chr17:47092049..47092091, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:47092049..47092091, + |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.15e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 9.99e-30 | 1 |
extrahepatic bile duct | 9.99e-30 | 1 |
common bile duct | 9.99e-30 | 1 |
duodenal papilla | 9.99e-30 | 1 |
biliary system | 1.02e-13 | 9 |
biliary tree | 1.02e-13 | 9 |
biliary bud | 1.02e-13 | 9 |
epithelium of foregut-midgut junction | 5.46e-11 | 25 |
anatomical boundary | 5.46e-11 | 25 |
hepatobiliary system | 5.46e-11 | 25 |
foregut-midgut junction | 5.46e-11 | 25 |
septum transversum | 5.46e-11 | 25 |
gallbladder | 6.73e-11 | 3 |
gall bladder primordium | 6.73e-11 | 3 |
duodenum | 7.42e-11 | 2 |
small intestine | 5.08e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.33e-15 | 2 |
gastrointestinal system cancer | 3.88e-09 | 14 |