FFCP PHASE1:Hg19::chr17:38613830..38613904,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38613830..38613904,- | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38613830..38613904,- | |description=CAGE_peak_at_chr17:38613830..38613904,- | ||
|id=chr17:38613830..38613904,- | |id=chr17:38613830..38613904,- | ||
|ontology_enrichment_celltype=CL:0000055!1.94e-22!180;CL:0000057!3.61e-18!75;CL:0002371!8.37e-10!591;CL:0000183!9.37e-10!59;CL:0000222!1.47e-09!119;CL:0000680!3.11e-09!57;CL:0000056!3.11e-09!57;CL:0000355!3.11e-09!57;CL:0000144!6.79e-09!625;CL:0000187!4.93e-08!54;CL:0000393!2.10e-07!60;CL:0000211!2.10e-07!60;CL:0000548!2.60e-07!679;CL:0000004!2.60e-07!679;CL:0000255!2.60e-07!679;CL:0000048!6.03e-07!430;CL:0000012!6.58e-07!682 | |ontology_enrichment_celltype=CL:0000055!1.94e-22!180;CL:0000057!3.61e-18!75;CL:0002371!8.37e-10!591;CL:0000183!9.37e-10!59;CL:0000222!1.47e-09!119;CL:0000680!3.11e-09!57;CL:0000056!3.11e-09!57;CL:0000355!3.11e-09!57;CL:0000144!6.79e-09!625;CL:0000187!4.93e-08!54;CL:0000393!2.10e-07!60;CL:0000211!2.10e-07!60;CL:0000548!2.60e-07!679;CL:0000004!2.60e-07!679;CL:0000255!2.60e-07!679;CL:0000048!6.03e-07!430;CL:0000012!6.58e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000057;4.27e-08;73!CL:0000723;1.15e-07;61!CL:0002570;2.14e-07;8!CL:0000134;2.55e-07;55!CL:0002540;2.68e-07;6!CL:0002334;5.43e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.32e-19,76;CL:0000048,3.56e-12,427;CL:0000723,1.67e-11,433;CL:0000680,6.39e-11,58;CL:0000056,6.39e-11,58;CL:0000355,6.39e-11,58;CL:0000034,1.20e-10,441;CL:0000187,2.90e-09,55;CL:0000222,5.15e-08,121;CL:0002570,8.23e-08,8;CL:0002320,1.00e-07,361;CL:0000393,1.61e-07,61;CL:0000211,1.61e-07,61;CL:0002540,2.88e-07,6;CL:0002334,3.48e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.35e-12!216;UBERON:0005256!3.35e-11!143;UBERON:0000490!1.51e-09!138;UBERON:0000914!2.14e-09!83;UBERON:0002329!2.14e-09!83;UBERON:0003077!2.14e-09!83;UBERON:0003059!2.14e-09!83;UBERON:0007282!2.14e-09!83;UBERON:0009618!2.14e-09!83;UBERON:0007285!2.14e-09!83;UBERON:0002385!1.83e-08!63;UBERON:0001015!1.83e-08!63;UBERON:0000383!1.83e-08!63;UBERON:0001134!2.83e-08!61;UBERON:0002036!2.83e-08!61;UBERON:0003082!2.83e-08!61;UBERON:0004290!5.36e-08!70;UBERON:0000486!6.73e-08!82;UBERON:0000475!7.06e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.46e-08;8!UBERON:0000982;2.46e-08;8!UBERON:0004770;2.46e-08;8!UBERON:0004457;2.52e-08;9!UBERON:0000042;2.52e-08;9!UBERON:0002384;1.14e-07;198!UBERON:0001013;1.30e-07;14!UBERON:0002204;1.50e-07;70!UBERON:0011135;2.09e-07;5!UBERON:0002216;2.09e-07;5!UBERON:0011134;2.09e-07;5!UBERON:0002209;2.09e-07;5!UBERON:0002213;2.09e-07;5!UBERON:0007844;2.09e-07;5!UBERON:0011138;2.09e-07;5!UBERON:0001130;2.09e-07;5!UBERON:0001066;2.09e-07;5!UBERON:0001468;2.09e-07;5!UBERON:0003688;2.94e-07;6!UBERON:0002358;2.94e-07;6!UBERON:0003684;2.94e-07;6!UBERON:0001178;2.94e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.54e-10,78;UBERON:0001134,2.99e-10,62;UBERON:0002036,2.99e-10,62;UBERON:0003082,2.99e-10,62;UBERON:0003104,4.61e-10,160;UBERON:0009142,4.61e-10,160;UBERON:0007524,5.05e-10,73;UBERON:0002329,1.19e-09,71;UBERON:0003059,1.19e-09,71;UBERON:0007282,1.19e-09,71;UBERON:0004290,1.19e-09,71;UBERON:0009618,1.19e-09,71;UBERON:0002385,1.28e-09,64;UBERON:0001015,1.28e-09,64;UBERON:0000383,1.28e-09,64;UBERON:0005256,1.86e-09,122;UBERON:0003077,2.25e-09,72;UBERON:0007285,2.25e-09,72;UBERON:0000490,2.36e-09,148;UBERON:0000486,5.36e-09,83;UBERON:0004905,2.45e-08,8;UBERON:0000982,2.45e-08,8;UBERON:0004770,2.45e-08,8;UBERON:0001013,5.94e-08,14;UBERON:0002384,6.68e-08,371;UBERON:0002100,1.56e-07,199;UBERON:0011135,2.06e-07,5;UBERON:0002216,2.06e-07,5;UBERON:0011134,2.06e-07,5;UBERON:0002209,2.06e-07,5;UBERON:0002213,2.06e-07,5;UBERON:0005856,2.06e-07,5;UBERON:0005866,2.06e-07,5;UBERON:0005863,2.06e-07,5;UBERON:0007844,2.06e-07,5;UBERON:0011138,2.06e-07,5;UBERON:0001130,2.06e-07,5;UBERON:0001066,2.06e-07,5;UBERON:0001468,2.06e-07,5;UBERON:0003688,2.82e-07,6;UBERON:0002358,2.82e-07,6;UBERON:0003684,2.82e-07,6;UBERON:0001178,2.82e-07,6;UBERON:0000926,3.44e-07,315;UBERON:0004120,3.44e-07,315;UBERON:0006603,3.44e-07,315 | |||
|phase1_expression=4.1786027232228,2.78330681058278,2.67813367782345,12.0087958023756,8.49226079411847,12.2127393374052,0,0,4.96252693579693,0.245733936501509,0.697801167972428,0,0,13.4905324726451,12.2617029019329,2.01697543935533,1.20538905604795,2.19093027116212,1.46379839637152,0,0.612002073732759,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.04841031644363,1.2786256184353,10.843174571537,2.00535164254356,14.9191914529648,0,0.973269740605272,0.0945348171640679,1.33037638477538,1.05401742831751,0.654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,1.67799774483962,1.6507082516404,0,1.03366703667732,0.35576626268671,0,2.81980521976403,0,2.68468263302986,2.57364156242108,4.0507097394088,0.625098097988558,0.22452937262617,0.450445921933289,0,0,1.09921046358244,0,0,0,3.97577561356255,1.2663051166458,0.662045904066094,2.0078563452417,1.06400514659507,1.68203280042692,0,3.20667812942308,0.622422070799533,0.269421344139376,1.30769522490767,1.21085942115945,2.30470369792,0,1.24864030732128,0.570471821544449,1.19558944441441,0.469737994575059,0,0,3.67477508258808,1.84251475967652,2.06651562351531,10.6920257155385,6.92347401979959,0,0.718618141816238,2.02003336744879,0.750711119231785,0,1.31693286264251,15.63087758575,9.16452159330241,1.58805056424029,1.4351170855109,3.41691822109708,4.23863802319124,2.40072876867522,1.03052529238439,0.257640540045629,4.09457083929498,1.18143432568886,1.26668106709558,1.00973509697646,1.84099797284599,1.2931684545505,1.06502877754984,1.10827308050404,3.39121184620975,0.193260853163297,0,0,0,0.265059536642971,0.116193942869518,0.207322110030741,0.252320850875628,0,0,2.57296375277154,0,4.17931135228781,8.66255378003503,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,4.20725321410337,0.8231480226628,1.47008711385542,3.80265104465493,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0,0,1.3032332212413,1.03993478527958,8.6598805215164,0.115930404975077,0.234817388471643,0.433099343283221,0,0.380508304469197,3.1608175918371,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,2.4935017179123,0.517086863031111,3.57656445851882,2.535908257668,2.12750493267896,0,6.43018435655355,5.67396528093113,2.1313774321288,4.43231780340257,2.71310802695722,1.64648067356154,1.95441710576241,7.46323092359346,5.543663110534,3.91871190177462,0.871533458600294,2.49932477955143,1.2162378064119,0.502257091432126,0,0.958499421966331,1.14861935834114,0,5.06734573336527,5.54786070886035,1.07436577943937,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,15.9498939234882,23.5080144898048,11.9356610427884,17.261581507057,19.9840467452821,18.9242898040722,4.91993942969395,0,0,3.10419213877515,1.99267679560631,0.368738337083406,2.78027566297865,2.34961388955289,2.74514739048685,0,0,0,2.12189300012382,1.66435439510497,1.20956117331872,1.24053903909388,3.99001130548962,1.68396056659844,3.45975702990393,3.07024349440022,4.82561763430822,11.8734453155993,0.616838775210622,1.59805552781814,1.47828880824856,0.519254429183621,3.60252173225874,0.120859449591622,0,0,1.83703117063371,1.45672934405374,1.04899531967539,0,0.231046011313244,2.35304930753057,0,0.633309773357254,3.4120015221269,1.19065593693561,0.647747748306418,0,2.16757150035082,1.50506932156456,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,6.42735719376638,2.70678011217942,2.92692372517824,1.84204409671355,0.551346289938122,2.36324538710202,5.22060098091223,1.44885266607372,0.534192213880424,0.165284915360978,0.192190067365106,0,0,3.253918845081,2.51849877464512,0.6970372701606,0.308033580176089,0,0,0,0,2.97726695487734,4.42931194606216,4.19386426632415,1.535386747868,0.855877976067841,1.27281299170375,0,1.79872457583315,1.09814811894422,1.41374882814824,0,0,0,1.95053495635836,2.92456187557541,0,3.00299805097569,1.55545975149084,2.26016233240486,0.551365343546124,2.65375590096488,0.438450885253763,2.31510213706675,1.31178950409327,0,0.30982349809975,0,0.573645408816206,1.57198465620994,0,2.48332744849418,32.2994682005426,28.9779505804714,0,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0.43050537267123,0,0,2.06751060186264,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0.456469358066384,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0.73254089635947,0,0,0.284136146806413,0.23874448473769,0.296964680832639,0,0.994147647766298,0,2.00355669041231,0,0,1.39473591775749,0,0,0.306806047506464,0,3.42143546427988,0,0.179021174675609,0,0.887790650732402,0,2.22273980289274,0,0.0927680981618513,0,0,0,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| ||
|short_description=p@chr17:38613830..38613904,- | |short_description=p@chr17:38613830..38613904,- | ||
}} | }} |
Latest revision as of 16:29, 25 July 2015
Short description: | p@chr17:38613830..38613904, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613830..38613904, - |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.32e-19 | 76 |
multi fate stem cell | 3.56e-12 | 427 |
somatic stem cell | 1.67e-11 | 433 |
muscle precursor cell | 6.39e-11 | 58 |
myoblast | 6.39e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.39e-11 | 58 |
stem cell | 1.20e-10 | 441 |
muscle cell | 2.90e-09 | 55 |
mesodermal cell | 5.15e-08 | 121 |
mesenchymal stem cell of adipose | 8.23e-08 | 8 |
connective tissue cell | 1.00e-07 | 361 |
electrically responsive cell | 1.61e-07 | 61 |
electrically active cell | 1.61e-07 | 61 |
mesenchymal stem cell of the bone marrow | 2.88e-07 | 6 |
preadipocyte | 3.48e-07 | 12 |