FFCP PHASE1:Hg19::chr17:37822481..37822514,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:37822481..37822514,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_at_chr17:37822481..37822514,+ | |description=CAGE_peak_at_chr17:37822481..37822514,+ | ||
|id=chr17:37822481..37822514,+ | |id=chr17:37822481..37822514,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.17e-18;4!UBERON:0007284;1.17e-18;4!UBERON:0006603;3.93e-10;65!UBERON:0010226;1.03e-09;1!UBERON:0000358;1.56e-09;1!UBERON:0004874;1.56e-09;1!UBERON:0010227;2.77e-09;1!UBERON:0006298;4.50e-09;1!UBERON:0004140;4.50e-09;1!UBERON:0003104;1.17e-08;31 | |||
|ontology_enrichment_disease=DOID:114!3.74e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.83e-17;2!DOID:178;1.91e-09;1!DOID:326;1.91e-09;1!DOID:3978;1.91e-09;1!DOID:3394;1.91e-09;1!DOID:5844;1.91e-09;1!DOID:1287;3.47e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.91e-17,2;DOID:178,1.99e-09,1;DOID:326,1.99e-09,1;DOID:3978,1.99e-09,1;DOID:3394,1.99e-09,1;DOID:5844,1.99e-09,1;DOID:1287,3.54e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.40e-22!115;UBERON:0004151!3.75e-14!3;UBERON:0003978!4.88e-14!3;UBERON:0009751!4.88e-14!3;UBERON:0000946!4.88e-14!3;UBERON:0002523!4.88e-14!3;UBERON:0005983!4.88e-14!3;UBERON:0002165!4.88e-14!3;UBERON:0002062!4.88e-14!3;UBERON:0007280!4.88e-14!3;UBERON:0007100!8.10e-12!27;UBERON:0001630!3.13e-10!2;UBERON:0005090!3.13e-10!2;UBERON:0002133!5.81e-10!2;UBERON:0000341!6.63e-10!2;UBERON:0002081!7.24e-10!2;UBERON:0003103!2.15e-09!69;UBERON:0003127!2.31e-09!2;UBERON:0002148!6.85e-09!2;UBERON:0009662!6.85e-09!2;UBERON:0001723!3.97e-07!3;UBERON:0001033!3.97e-07!3;UBERON:0010056!3.97e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;7.44e-25;3!UBERON:0007100;8.78e-25;25!UBERON:0003978;1.16e-24;3!UBERON:0000946;1.16e-24;3!UBERON:0005090;1.26e-17;2!UBERON:0001630;1.26e-17;2!UBERON:0002133;4.49e-17;2!UBERON:0000341;5.50e-17;2!UBERON:0002081;6.47e-17;2!UBERON:0000948;1.19e-12;22!UBERON:0001723;3.90e-12;3!UBERON:0001033;3.90e-12;3!UBERON:0001389;7.97e-10;1!UBERON:0000026;7.97e-10;1!UBERON:0008784;7.97e-10;1!UBERON:0006058;7.97e-10;1!UBERON:0003663;7.97e-10;1!UBERON:0004256;7.97e-10;1!UBERON:0004708;7.97e-10;1!UBERON:0002101;7.97e-10;1!UBERON:0004709;7.97e-10;1!UBERON:0002529;7.97e-10;1!UBERON:0010538;7.97e-10;1!UBERON:0003661;7.97e-10;1!UBERON:0010890;7.97e-10;1!UBERON:0002471;7.97e-10;1!UBERON:0001383;7.97e-10;1!UBERON:0010758;7.97e-10;1!UBERON:0010707;7.97e-10;1!UBERON:0000978;7.97e-10;1!UBERON:0002103;7.97e-10;1!UBERON:0001665;7.97e-10;1!UBERON:0003823;7.97e-10;1!UBERON:0000154;7.97e-10;1!UBERON:0010709;7.97e-10;1!UBERON:0002084;1.03e-09;1!UBERON:0002082;1.03e-09;1!UBERON:0000989;1.56e-09;1!UBERON:0008811;1.56e-09;1!UBERON:0002426;1.56e-09;1!UBERON:0003831;1.56e-09;1!UBERON:0003898;1.56e-09;1!UBERON:0004830;1.56e-09;1!UBERON:0003830;1.56e-09;1!UBERON:0005175;1.56e-09;1!UBERON:0001774;1.56e-09;1!UBERON:0001103;1.56e-09;1!UBERON:0002135;1.91e-09;1!UBERON:0002146;2.35e-09;1!UBERON:0002134;2.35e-09;1!UBERON:0005208;2.35e-09;1!UBERON:0005623;2.35e-09;1!UBERON:0004145;2.35e-09;1!UBERON:0005946;2.35e-09;1!UBERON:0005965;2.35e-09;1!UBERON:0002078;2.35e-09;1!UBERON:0002079;2.77e-09;1!UBERON:0007029;3.00e-09;1!UBERON:0001736;4.50e-09;1!UBERON:0001134;2.78e-08;16!UBERON:0002036;2.78e-08;16!UBERON:0010313;8.85e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,7.44e-25,3;UBERON:0003978,1.21e-24,3;UBERON:0009751,1.21e-24,3;UBERON:0000946,1.21e-24,3;UBERON:0002523,1.21e-24,3;UBERON:0005983,1.21e-24,3;UBERON:0002165,1.21e-24,3;UBERON:0002062,1.21e-24,3;UBERON:0007280,1.21e-24,3;UBERON:0007100,8.09e-23,27;UBERON:0005090,1.37e-17,2;UBERON:0001630,1.37e-17,2;UBERON:0002133,4.32e-17,2;UBERON:0000341,5.51e-17,2;UBERON:0002081,6.47e-17,2;UBERON:0010227,6.47e-17,2;UBERON:0007023,3.18e-15,114;UBERON:0003103,5.17e-15,68;UBERON:0001723,3.90e-12,3;UBERON:0001033,3.90e-12,3;UBERON:0010056,3.90e-12,3;UBERON:0000948,1.54e-11,24;UBERON:0005498,1.54e-11,24;UBERON:0004140,1.54e-11,24;UBERON:0009881,1.54e-11,24;UBERON:0004141,1.54e-11,24;UBERON:0003084,1.54e-11,24;UBERON:0007005,1.54e-11,24;UBERON:0004139,1.54e-11,24;UBERON:0004291,1.54e-11,24;UBERON:0004797,6.73e-11,7;UBERON:0005418,7.98e-10,1;UBERON:0001389,7.98e-10,1;UBERON:0000026,7.98e-10,1;UBERON:0008784,7.98e-10,1;UBERON:0006058,7.98e-10,1;UBERON:0003663,7.98e-10,1;UBERON:0004256,7.98e-10,1;UBERON:0004708,7.98e-10,1;UBERON:0002101,7.98e-10,1;UBERON:0004709,7.98e-10,1;UBERON:0002529,7.98e-10,1;UBERON:0010538,7.98e-10,1;UBERON:0003661,7.98e-10,1;UBERON:0010890,7.98e-10,1;UBERON:0002471,7.98e-10,1;UBERON:0001383,7.98e-10,1;UBERON:0004357,7.98e-10,1;UBERON:0004347,7.98e-10,1;UBERON:0005420,7.98e-10,1;UBERON:0005732,7.98e-10,1;UBERON:0010758,7.98e-10,1;UBERON:0010707,7.98e-10,1;UBERON:0000978,7.98e-10,1;UBERON:0002103,7.98e-10,1;UBERON:0001665,7.98e-10,1;UBERON:0003823,7.98e-10,1;UBERON:0000154,7.98e-10,1;UBERON:0010709,7.98e-10,1;UBERON:0005733,7.98e-10,1;UBERON:0005730,7.98e-10,1;UBERON:0002084,1.03e-09,1;UBERON:0002082,1.03e-09,1;UBERON:0010226,1.03e-09,1;UBERON:0000989,1.56e-09,1;UBERON:0008811,1.56e-09,1;UBERON:0006258,1.56e-09,1;UBERON:0005876,1.56e-09,1;UBERON:0004874,1.56e-09,1;UBERON:0002426,1.69e-09,1;UBERON:0003831,1.69e-09,1;UBERON:0003898,1.69e-09,1;UBERON:0004830,1.69e-09,1;UBERON:0003830,1.69e-09,1;UBERON:0005175,1.69e-09,1;UBERON:0001774,1.69e-09,1;UBERON:0001103,1.69e-09,1;UBERON:0010084,1.69e-09,1;UBERON:0002135,1.84e-09,1;UBERON:0002134,2.35e-09,1;UBERON:0005208,2.35e-09,1;UBERON:0005946,2.35e-09,1;UBERON:0005965,2.35e-09,1;UBERON:0002078,2.35e-09,1;UBERON:0002146,2.55e-09,1;UBERON:0005623,2.55e-09,1;UBERON:0002079,2.77e-09,1;UBERON:0007029,3.00e-09,1;UBERON:0001736,4.15e-09,1;UBERON:0006298,4.15e-09,1;UBERON:0010313,8.95e-08,10;UBERON:0002342,8.95e-08,10;UBERON:0005062,8.95e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.236087062183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.0967563312890851,0,0,0.290967049465258,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6127312483457,9.16641696046735,9.33234931949858,10.5829870264465,36.9134401397451,12.4976016167449,1.07493555978762,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,8.5763439164804,33.766690488637,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,11.4128571029538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,213.004087434817,9.95829226505596,1.1598144313382,4.37139893753226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9925486425736,1.1903221573187,0,0,0,1.52753179867596,0.808468755832877,38.9712978735561,19.8495314629463,0.202056159043763,0.143444410785353,1.99596213927608,0,0,0,0,11.7320471201727,0,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.236087062183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.0967563312890851,0,0,0.290967049465258,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6127312483457,9.16641696046735,9.33234931949858,10.5829870264465,36.9134401397451,12.4976016167449,1.07493555978762,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,8.5763439164804,33.766690488637,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,11.4128571029538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,213.004087434817,9.95829226505596,1.1598144313382,4.37139893753226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9925486425736,1.1903221573187,0,0,0,1.52753179867596,0.808468755832877,38.9712978735561,19.8495314629463,0.202056159043763,0.143444410785353,1.99596213927608,0,0,0,0,11.7320471201727,0,0,0,1.00636896795513,0 | ||
|short_description=p@chr17:37822481..37822514,+ | |short_description=p@chr17:37822481..37822514,+ | ||
}} | }} |
Latest revision as of 16:10, 25 July 2015
Short description: | p@chr17:37822481..37822514, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:37822481..37822514, + |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.91e-17 | 2 |
vascular disease | 1.99e-09 | 1 |
ischemia | 1.99e-09 | 1 |
extrinsic cardiomyopathy | 1.99e-09 | 1 |
myocardial ischemia | 1.99e-09 | 1 |
myocardial infarction | 1.99e-09 | 1 |
cardiovascular system disease | 3.54e-09 | 4 |