FFCP PHASE1:Hg19::chr16:81551450..81551487,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_AK023945_5end | |association_with_transcript=21bp_to_AK023945_5end | ||
|cluster_id=chr16:81551450..81551487,+ | |||
|description=CAGE_peak_1_at_AK023945_5end | |description=CAGE_peak_1_at_AK023945_5end | ||
|id=chr16:81551450..81551487,+ | |id=chr16:81551450..81551487,+ | ||
|ontology_enrichment_celltype=CL:0000213!6.60e-25!57;CL:0000215!6.60e-25!57;CL:0002139!1.10e-23!24;CL:0000115!1.44e-22!35;CL:0002078!9.86e-21!44;CL:0000222!4.02e-19!119;CL:0000071!7.25e-18!18;CL:0002546!7.25e-18!18;CL:0000076!7.22e-13!62;CL:1000413!4.95e-10!9;CL:0000057!1.71e-09!75;CL:0000220!1.70e-08!246;CL:0002321!3.13e-08!248;CL:0005020!2.24e-07!6;CL:0002138!2.24e-07!6;CL:0005022!2.24e-07!6;CL:0002544!5.43e-07!6 | |ontology_enrichment_celltype=CL:0000213!6.60e-25!57;CL:0000215!6.60e-25!57;CL:0002139!1.10e-23!24;CL:0000115!1.44e-22!35;CL:0002078!9.86e-21!44;CL:0000222!4.02e-19!119;CL:0000071!7.25e-18!18;CL:0002546!7.25e-18!18;CL:0000076!7.22e-13!62;CL:1000413!4.95e-10!9;CL:0000057!1.71e-09!75;CL:0000220!1.70e-08!246;CL:0002321!3.13e-08!248;CL:0005020!2.24e-07!6;CL:0002138!2.24e-07!6;CL:0005022!2.24e-07!6;CL:0002544!5.43e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.91e-44;24!CL:0000115;1.65e-38;36!CL:0000071;4.07e-32;18!CL:0000213;8.97e-28;58!CL:0000215;8.97e-28;58!CL:0002078;2.70e-27;45!CL:1000413;3.79e-19;9!CL:0002138;1.12e-13;6!CL:0000076;1.76e-13;63!CL:0002544;7.86e-13;6!CL:0000077;5.05e-11;19!CL:0002543;1.02e-08;6!CL:0002144;6.42e-08;3!CL:0002541;7.57e-08;3!CL:0002188;1.98e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,5.99e-50,58;CL:0000215,5.99e-50,58;CL:0000115,6.38e-45,36;CL:0002139,2.18e-44,24;CL:0002078,6.12e-42,45;CL:0000071,2.93e-32,18;CL:0002546,2.93e-32,18;CL:0000222,3.12e-26,121;CL:0000076,6.37e-24,63;CL:1000413,3.63e-19,9;CL:0005020,1.18e-13,6;CL:0002138,1.18e-13,6;CL:0005022,1.18e-13,6;CL:0002544,7.36e-13,6;CL:0002321,3.99e-11,250;CL:0000077,5.81e-11,19;CL:0000066,9.57e-10,253;CL:0002543,8.06e-09,6;CL:0002144,6.37e-08,3;CL:0002541,6.96e-08,3;CL:0002188,2.28e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;4.07e-32;18!CL:0005022;1.12e-13;6!CL:0000222;3.50e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.55e-20!69;UBERON:0001986!7.25e-18!18;UBERON:0004638!7.25e-18!18;UBERON:0004852!7.25e-18!18;UBERON:0002049!1.93e-17!79;UBERON:0007798!1.93e-17!79;UBERON:0001981!6.73e-17!60;UBERON:0007500!6.73e-17!60;UBERON:0004537!6.73e-17!60;UBERON:0006965!6.73e-17!60;UBERON:0004872!1.58e-16!84;UBERON:0000487!1.03e-14!22;UBERON:0001009!1.46e-13!113;UBERON:0004535!2.85e-12!110;UBERON:0006914!5.23e-12!25;UBERON:0003914!2.54e-11!118;UBERON:0003915!4.95e-10!9;UBERON:0004700!4.95e-10!9;UBERON:0001917!4.95e-10!9;UBERON:0001637!8.37e-10!42;UBERON:0003509!8.37e-10!42;UBERON:0004572!8.37e-10!42;UBERON:0004111!3.37e-09!241;UBERON:0000119!4.08e-09!312;UBERON:0000483!1.20e-08!309;UBERON:0000025!2.18e-08!194;UBERON:0000477!1.51e-07!286;UBERON:0004923!5.13e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.07e-32;18!UBERON:0001986;4.07e-32;18!UBERON:0004852;4.07e-32;18!UBERON:0000487;2.58e-25;22!UBERON:0006914;1.18e-21;25!UBERON:0003915;3.79e-19;9!UBERON:0004700;3.79e-19;9!UBERON:0001917;3.79e-19;9!UBERON:0000490;3.62e-14;33!UBERON:0000055;7.89e-13;65!UBERON:0001473;5.24e-10;8!UBERON:0004536;5.24e-10;8!UBERON:0006558;5.24e-10;8!UBERON:0007500;6.78e-10;56!UBERON:0001981;6.78e-10;56!UBERON:0004537;6.78e-10;56!UBERON:0002049;5.13e-08;75!UBERON:0007798;5.13e-08;75!UBERON:0010523;6.42e-08;3!UBERON:0001915;6.42e-08;3!UBERON:0001982;6.42e-08;3!UBERON:0003124;7.57e-08;3!UBERON:0000920;7.57e-08;3!UBERON:0002465;8.28e-08;10!UBERON:0003914;1.56e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.93e-32,18;UBERON:0001986,2.93e-32,18;UBERON:0004852,2.93e-32,18;UBERON:0000487,1.98e-25,22;UBERON:0000055,6.37e-22,68;UBERON:0006914,9.41e-22,25;UBERON:0003915,3.63e-19,9;UBERON:0004700,3.63e-19,9;UBERON:0001917,3.63e-19,9;UBERON:0002049,6.39e-18,78;UBERON:0007798,6.39e-18,78;UBERON:0007500,1.06e-15,59;UBERON:0001981,1.06e-15,59;UBERON:0004537,1.06e-15,59;UBERON:0006965,1.06e-15,59;UBERON:0004872,4.01e-12,83;UBERON:0001009,1.92e-11,112;UBERON:0004535,3.72e-11,109;UBERON:0001473,5.43e-10,8;UBERON:0004536,5.43e-10,8;UBERON:0006558,5.43e-10,8;UBERON:0003914,9.53e-09,117;UBERON:0003124,5.68e-08,7;UBERON:0010523,6.37e-08,3;UBERON:0001915,6.37e-08,3;UBERON:0001982,6.37e-08,3;UBERON:0000920,6.96e-08,3;UBERON:0002465,8.51e-08,10 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,6.16163462836786,2.58070378531837,7.63709103536707,7.34900324501212,13.0044825225071,18.7080268519246,16.3016073898712,8.0109195342492,8.89415656716776,10.7110596084694,12.4877088303836,16.7259863258073,11.2268546472158,8.45625084795498,8.1014194788176,3.66128885964727,0.673588117878509,1.68917220724983,12.2653309972707,10.4419222552494,2.38162267109529,0,0,0.872188104285069,0.496971951695318,0.506522046658319,0.264818361626438,0.573673241497627,0.709336764396714,0,1.06748995729705,0.98667019366864,0.311211035399766,0,0.326923806226917,0,0,0.234321431833797,0.936480230490962,3.99330275081114,0.448346041655403,0.352303495931295,1.78060238804945,1.68540968042698,0.816616685019573,0.61417158655884,0,0,0,0,0,0.168336113954066,0,3.60183350129438,0.438977620880838,0,0,0.226864366320042,2.15267562826634,0,0,0,0,1.54584324027377,1.11670113798954,0.675105328965065,0.389748020644795,0.504867548488229,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.847802961552438,1.73934767846967,3.27295344709002,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,17.7157309109916,1.40241773803446,1.2347220339942,0,0,0,0,0,0.245976877086227,0,0.439001141634502,1.1240175325762,0,0,0,2.07986957055916,0,0,0.117408694235822,20.7887684775946,9.72269576410883,7.03940363268014,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,1.90622843387113,0,0.95339771567235,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,1.09970290300263,0,0,0,1.67737398844108,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0.368738337083406,0.434418072340414,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0.496215615637554,0.460385919864187,0,0.384417447767103,1.02341449813341,1.12597744800525,2.96836132889982,0.308419387605311,0,0,0.519254429183621,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,9.09867072567173,3.40187410553031,3.02282282542995,21.5918153766405,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,1.54561517471583,0,0,0.574265537996172,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0.924100740528266,2.66153015158511,0,0.37064843820784,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,2.42618977887979,0,0.421258456238981,0.48763373908959,0.487426979262569,3.16950440270266,0,0,0,0,0,0,0,0,0.811641507850816,1.8589409885985,0.563391205064483,0,0,1.07001315444375,0.354761064070598,0,0,0.379473173765715,0,0.0962221127255121,0,1.08890984861323,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54175355742871,0,0,0.568272293612826,3.34242278632766,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,1.55519793830904,0.449341755736634,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0.23056390438806,2.15418346583453,0.217294743844016,16.9070614657917,7.87739303256016,49.572234169733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442306057399416,0,0,1.99396161812156,3.30991955875499,3.7671950208867,3.58417289318877,0,0.832048038078832,0,0,0,0,1.0319161948297,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0.0801588202515337,0,0,0,0,0,0,2.48505071130865,0,7.06701871582793,5.64855370086599,0,0,0,0,0,1.28929632425987,0,0.558564802544508,0,1.43574604915363,0.798716001995964,0.858452096273142,1.11585728720936,0.335917362433631,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,1.18208560948797,0.314727528809989,0,0,3.26255835443057,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,2.7575888342497,1.22538230705385,0,0,0.886068179966986,0.244052529803926,0,0,0.110929051536852,0,0,0.999843263696853,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.477890301491107,0,0,1.24411862352257,0.265841714557995,0,0,0.380805212168795,1.22061219961398,0.181848659202559,0,0,1.59238355479446,3.20022211730523,0,0,15.1421877874381,3.08191728651685,7.07657251537255,0.782982875895635,2.04035332961045,0,0,9.31261973623734,9.57284486199014,0.657852148736121,9.71790302702346,7.90947556910751,3.88567613502067,0,2.41801239211839,1.51929978088691,0.138258436151731,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,1.13503190713367,0,0,0,0,0,0,0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| ||
|short_description=p1@AK023945 | |short_description=p1@AK023945 | ||
}} | }} |
Latest revision as of 12:42, 25 July 2015
Short description: | p1@AK023945 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK023945_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_AK023945_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 5.99e-50 | 58 |
barrier cell | 5.99e-50 | 58 |
endothelial cell | 6.38e-45 | 36 |
endothelial cell of vascular tree | 2.18e-44 | 24 |
meso-epithelial cell | 6.12e-42 | 45 |
blood vessel endothelial cell | 2.93e-32 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.93e-32 | 18 |
mesodermal cell | 3.12e-26 | 121 |
squamous epithelial cell | 6.37e-24 | 63 |
endothelial cell of artery | 3.63e-19 | 9 |
lymphangioblast | 1.18e-13 | 6 |
endothelial cell of lymphatic vessel | 1.18e-13 | 6 |
vascular lymphangioblast | 1.18e-13 | 6 |
aortic endothelial cell | 7.36e-13 | 6 |
embryonic cell | 3.99e-11 | 250 |
mesothelial cell | 5.81e-11 | 19 |
epithelial cell | 9.57e-10 | 253 |
vein endothelial cell | 8.06e-09 | 6 |
capillary endothelial cell | 6.37e-08 | 3 |
chorionic membrane mesenchymal stem cell | 6.96e-08 | 3 |
glomerular endothelial cell | 2.28e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.93e-32 | 18 |
endothelium | 2.93e-32 | 18 |
cardiovascular system endothelium | 2.93e-32 | 18 |
simple squamous epithelium | 1.98e-25 | 22 |
vessel | 6.37e-22 | 68 |
squamous epithelium | 9.41e-22 | 25 |
endothelial tube | 3.63e-19 | 9 |
arterial system endothelium | 3.63e-19 | 9 |
endothelium of artery | 3.63e-19 | 9 |
vasculature | 6.39e-18 | 78 |
vascular system | 6.39e-18 | 78 |
epithelial tube open at both ends | 1.06e-15 | 59 |
blood vessel | 1.06e-15 | 59 |
blood vasculature | 1.06e-15 | 59 |
vascular cord | 1.06e-15 | 59 |
splanchnic layer of lateral plate mesoderm | 4.01e-12 | 83 |
circulatory system | 1.92e-11 | 112 |
cardiovascular system | 3.72e-11 | 109 |
lymphatic vessel | 5.43e-10 | 8 |
lymph vasculature | 5.43e-10 | 8 |
lymphatic part of lymphoid system | 5.43e-10 | 8 |
epithelial tube | 9.53e-09 | 117 |
chorion | 5.68e-08 | 7 |
microcirculatory vessel | 6.37e-08 | 3 |
endothelium of capillary | 6.37e-08 | 3 |
capillary | 6.37e-08 | 3 |
egg chorion | 6.96e-08 | 3 |
lymphoid system | 8.51e-08 | 10 |