FFCP PHASE1:Hg19::chr16:61785282..61785286,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:61785282..61785286,- | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr16:61785282..61785286,- | |description=CAGE_peak_at_chr16:61785282..61785286,- | ||
|id=chr16:61785282..61785286,- | |id=chr16:61785282..61785286,- | ||
|ontology_enrichment_celltype=CL:0002322!9.17e-08!5 | |ontology_enrichment_celltype=CL:0002322!9.17e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000222;6.72e-26;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!2.67e-07!22;DOID:2994!2.67e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;4.89e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.89e-11,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002346;5.23e-26;4!UBERON:0000923;5.23e-26;4!UBERON:0010316;5.23e-26;4!UBERON:0005291;5.23e-26;4!UBERON:0001874;6.72e-26;1!UBERON:0002050;4.91e-21;5!UBERON:0005423;4.91e-21;5!UBERON:0009663;4.37e-15;7!UBERON:0001897;1.14e-13;2!UBERON:0001875;1.14e-13;2!UBERON:0006514;1.14e-13;2!UBERON:0010225;1.14e-13;2!UBERON:0002420;5.83e-12;9!UBERON:0000125;5.83e-12;9!UBERON:0007245;5.83e-12;9!UBERON:0002308;5.83e-12;9!UBERON:0010009;5.83e-12;9!UBERON:0010011;5.83e-12;9!UBERON:0000454;5.83e-12;9!UBERON:0002331;7.29e-11;10!UBERON:0005383;1.47e-09;3!UBERON:0005382;1.47e-09;3!UBERON:0000922;1.12e-07;49!UBERON:0000178;1.49e-07;15!UBERON:0000179;1.49e-07;15!UBERON:0000463;1.49e-07;15!UBERON:0000369;1.75e-07;4!UBERON:0002435;1.75e-07;4!UBERON:0002784;1.75e-07;4!UBERON:0000204;1.75e-07;4 | |||
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| ||
|short_description=p@chr16:61785282..61785286,- | |short_description=p@chr16:61785282..61785286,- | ||
}} | }} |
Latest revision as of 10:55, 25 July 2015
Short description: | p@chr16:61785282..61785286, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:61785282..61785286, - |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
putamen | 1.26e-25 | 1 |
telencephalic nucleus | 5.81e-15 | 7 |
dorsal plus ventral thalamus | 9.40e-14 | 2 |
thalamic complex | 9.40e-14 | 2 |
globus pallidus | 1.37e-13 | 2 |
pallidum | 1.37e-13 | 2 |
basal ganglion | 7.27e-12 | 9 |
neural nucleus | 7.27e-12 | 9 |
nuclear complex of neuraxis | 7.27e-12 | 9 |
nucleus of brain | 7.27e-12 | 9 |
aggregate regional part of brain | 7.27e-12 | 9 |
collection of basal ganglia | 7.27e-12 | 9 |
cerebral subcortex | 7.27e-12 | 9 |
umbilical cord | 6.61e-11 | 10 |
blastocyst | 6.61e-11 | 10 |
blastula | 6.61e-11 | 10 |
bilaminar disc | 6.61e-11 | 10 |
inner cell mass | 6.61e-11 | 10 |
cleaving embryo | 6.61e-11 | 10 |
connecting stalk | 6.61e-11 | 10 |
inner cell mass derived epiblast | 6.61e-11 | 10 |
extraembryonic mesoderm | 6.61e-11 | 10 |
caudate-putamen | 1.81e-09 | 3 |
dorsal striatum | 1.81e-09 | 3 |
blood | 1.40e-07 | 15 |
haemolymphatic fluid | 1.40e-07 | 15 |
organism substance | 1.40e-07 | 15 |
regional part of diencephalon | 1.59e-07 | 4 |
corpus striatum | 2.04e-07 | 4 |
striatum | 2.04e-07 | 4 |
ventral part of telencephalon | 2.04e-07 | 4 |
future corpus striatum | 2.04e-07 | 4 |
neurectoderm | 2.36e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.89e-11 | 10 |