FFCP PHASE1:Hg19::chr16:50539874..50539887,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:50539874..50539887,+ | |||
|coexpression_cluster_id=C127 | |coexpression_cluster_id=C127 | ||
|description=CAGE_peak_at_chr16:50539874..50539887,+ | |description=CAGE_peak_at_chr16:50539874..50539887,+ | ||
|id=chr16:50539874..50539887,+ | |id=chr16:50539874..50539887,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.83e-12!12;CL:0000417!2.83e-12!12;CL:0000668!2.83e-12!12;CL:0000414!2.83e-12!12;CL:0000412!2.83e-12!12;CL:0000182!2.83e-12!12;CL:0002563!8.26e-10!4;CL:0000223!1.22e-08!59;CL:0002322!8.91e-08!5 | |ontology_enrichment_celltype=CL:0000181!2.83e-12!12;CL:0000417!2.83e-12!12;CL:0000668!2.83e-12!12;CL:0000414!2.83e-12!12;CL:0000412!2.83e-12!12;CL:0000182!2.83e-12!12;CL:0002563!8.26e-10!4;CL:0000223!1.22e-08!59;CL:0002322!8.91e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.35e-30;12!CL:0002253;2.59e-12;2!CL:0002231;1.51e-08;3!CL:0002563;8.61e-07;4!CL:0002327;9.36e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.35e-30,12;CL:0000223,1.06e-13,58;CL:0002253,2.59e-12,2;CL:0002231,1.51e-08,3;CL:0002563,8.61e-07,4;CL:0002327,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.61e-32;11!UBERON:0009497;1.31e-27;13!UBERON:0008425;4.59e-23;1!UBERON:0001041;1.38e-18;30!UBERON:0003104;5.72e-18;31!CL:0000223;2.02e-08;58 | |||
|ontology_enrichment_disease=DOID:0050619!1.65e-10!1;DOID:1357!1.65e-10!1;DOID:305!5.68e-10!106;DOID:5409!1.03e-09!4;DOID:0050687!7.15e-07!143 | |ontology_enrichment_disease=DOID:0050619!1.65e-10!1;DOID:1357!1.65e-10!1;DOID:305!5.68e-10!106;DOID:5409!1.03e-09!4;DOID:0050687!7.15e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:0050619;1.07e-23;1!DOID:1357;1.07e-23;1!DOID:7;8.66e-13;39!DOID:5093;9.36e-07;4!DOID:5409;9.36e-07;4!DOID:1612;9.36e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.07e-23,1;DOID:1357,1.07e-23,1;DOID:7,2.31e-14,39;DOID:305,4.60e-10,106;DOID:0050687,2.10e-07,143;DOID:5093,9.11e-07,4;DOID:1612,9.11e-07,4;DOID:5409,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.65e-10!1;UBERON:0001825!1.65e-10!1;UBERON:0002902!8.24e-10!1;UBERON:0009899!8.24e-10!1;UBERON:0001242!8.26e-10!4;UBERON:0001262!8.26e-10!4;UBERON:0004786!8.26e-10!4;UBERON:0004808!8.26e-10!4;UBERON:0001277!8.26e-10!4;UBERON:0001882!9.82e-10!1;UBERON:0005403!9.82e-10!1;UBERON:0002022!1.17e-09!1;UBERON:0003350!5.12e-08!5;UBERON:0002107!8.40e-08!19;UBERON:0006925!8.40e-08!19;UBERON:0008836!8.40e-08!19;UBERON:0005911!1.76e-07!82;UBERON:0003929!2.34e-07!54;UBERON:0002365!4.09e-07!31;UBERON:0002330!4.09e-07!31;UBERON:0008835!9.45e-07!22;UBERON:0003894!9.45e-07!22 | |ontology_enrichment_uberon=UBERON:0001764!1.65e-10!1;UBERON:0001825!1.65e-10!1;UBERON:0002902!8.24e-10!1;UBERON:0009899!8.24e-10!1;UBERON:0001242!8.26e-10!4;UBERON:0001262!8.26e-10!4;UBERON:0004786!8.26e-10!4;UBERON:0004808!8.26e-10!4;UBERON:0001277!8.26e-10!4;UBERON:0001882!9.82e-10!1;UBERON:0005403!9.82e-10!1;UBERON:0002022!1.17e-09!1;UBERON:0003350!5.12e-08!5;UBERON:0002107!8.40e-08!19;UBERON:0006925!8.40e-08!19;UBERON:0008836!8.40e-08!19;UBERON:0005911!1.76e-07!82;UBERON:0003929!2.34e-07!54;UBERON:0002365!4.09e-07!31;UBERON:0002330!4.09e-07!31;UBERON:0008835!9.45e-07!22;UBERON:0003894!9.45e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.07e-23;1!UBERON:0001825;1.07e-23;1!UBERON:0002107;4.60e-19;19!UBERON:0006925;4.60e-19;19!UBERON:0002365;2.60e-17;31!UBERON:0002330;2.60e-17;31!UBERON:0002423;1.33e-14;25!UBERON:0002368;2.89e-10;33!UBERON:0002530;1.80e-08;57!UBERON:0000949;6.99e-08;43!UBERON:0001052;8.61e-07;4!UBERON:0001242;8.61e-07;4!UBERON:0001262;8.61e-07;4!UBERON:0004786;8.61e-07;4!UBERON:0004808;8.61e-07;4!UBERON:0001277;8.61e-07;4!UBERON:0001911;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.07e-23,1;UBERON:0001825,1.07e-23,1;UBERON:0002107,4.60e-19,19;UBERON:0006925,4.60e-19,19;UBERON:0008836,4.60e-19,19;UBERON:0002365,5.28e-18,31;UBERON:0002330,5.28e-18,31;UBERON:0008835,1.57e-16,22;UBERON:0003894,1.57e-16,22;UBERON:0009854,7.82e-16,23;UBERON:0003929,1.03e-14,54;UBERON:0007499,1.33e-14,25;UBERON:0009497,1.33e-14,25;UBERON:0000015,1.33e-14,25;UBERON:0002423,1.33e-14,25;UBERON:0006235,1.33e-14,25;UBERON:0004161,1.33e-14,25;UBERON:0009856,4.65e-14,26;UBERON:0002530,1.85e-13,59;UBERON:0005911,4.91e-13,82;UBERON:0002368,1.50e-10,35;UBERON:0004921,6.23e-09,118;UBERON:0000949,2.77e-08,45;UBERON:0001007,3.09e-07,145;UBERON:0001555,3.09e-07,145;UBERON:0007026,3.09e-07,145;UBERON:0009569,4.52e-07,112;UBERON:0005172,5.92e-07,54;UBERON:0005173,5.92e-07,54;UBERON:0001052,8.61e-07,4;UBERON:0001242,8.61e-07,4;UBERON:0001262,8.61e-07,4;UBERON:0004786,8.61e-07,4;UBERON:0004808,8.61e-07,4;UBERON:0001277,8.61e-07,4;UBERON:0001911,9.11e-07,4;UBERON:0005333,9.11e-07,4;UBERON:0008425,9.11e-07,4;UBERON:0005311,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93569999982881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37141671448975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9795139432945,14.0234064506858,12.5272104739373,14.5591654725039,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6832241912943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785201868921944,0,0,0,0,0,0,0.596852325484105,0,3.3883824611688,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93569999982881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37141671448975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9795139432945,14.0234064506858,12.5272104739373,14.5591654725039,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6832241912943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785201868921944,0,0,0,0,0,0,0.596852325484105,0,3.3883824611688,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:50539874..50539887,+ | |short_description=p@chr16:50539874..50539887,+ | ||
}} | }} |
Latest revision as of 09:29, 25 July 2015
Short description: | p@chr16:50539874..50539887, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50539874..50539887, + |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.35e-30 | 12 |
endodermal cell | 1.06e-13 | 58 |
epithelial cell of large intestine | 2.59e-12 | 2 |
epithelial cell of prostate | 1.51e-08 | 3 |
intestinal epithelial cell | 8.61e-07 | 4 |
mammary gland epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.07e-23 | 1 |
maxillary sinus cancer | 1.07e-23 | 1 |
disease of anatomical entity | 2.31e-14 | 39 |
carcinoma | 4.60e-10 | 106 |
cell type cancer | 2.10e-07 | 143 |
thoracic cancer | 9.11e-07 | 4 |
breast cancer | 9.11e-07 | 4 |
lung small cell carcinoma | 9.63e-07 | 4 |