FFCP PHASE1:Hg19::chr16:29841027..29841052,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:29841027..29841052,+ | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_at_chr16:29841027..29841052,+ | |description=CAGE_peak_at_chr16:29841027..29841052,+ | ||
|id=chr16:29841027..29841052,+ | |id=chr16:29841027..29841052,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.41e-19!7;CL:0000586!2.41e-19!7;CL:0000223!1.34e-08!59;CL:0000181!3.32e-08!12;CL:0000417!3.32e-08!12;CL:0000668!3.32e-08!12;CL:0000414!3.32e-08!12;CL:0000412!3.32e-08!12;CL:0000182!3.32e-08!12;CL:0000066!4.33e-08!254 | |ontology_enrichment_celltype=CL:0000039!2.41e-19!7;CL:0000586!2.41e-19!7;CL:0000223!1.34e-08!59;CL:0000181!3.32e-08!12;CL:0000417!3.32e-08!12;CL:0000668!3.32e-08!12;CL:0000414!3.32e-08!12;CL:0000412!3.32e-08!12;CL:0000182!3.32e-08!12;CL:0000066!4.33e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.21e-20;4!CL:0002253;2.73e-11;2!CL:0002231;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.15e-20,4;CL:0002253,2.73e-11,2;CL:0002231,6.34e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.31e-23!106;DOID:0050687!5.65e-20!143;DOID:299!8.41e-14!25;DOID:162!6.60e-11!235;DOID:14566!1.61e-10!239;DOID:3493!4.36e-09!2;DOID:4929!1.25e-08!2;DOID:3119!8.84e-07!14 | |ontology_enrichment_disease=DOID:305!1.31e-23!106;DOID:0050687!5.65e-20!143;DOID:299!8.41e-14!25;DOID:162!6.60e-11!235;DOID:14566!1.61e-10!239;DOID:3493!4.36e-09!2;DOID:4929!1.25e-08!2;DOID:3119!8.84e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.92e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.33e-15!35;UBERON:0000160!6.45e-15!27;UBERON:0004921!7.66e-14!129;UBERON:0004185!7.66e-14!129;UBERON:0004119!3.40e-13!169;UBERON:0000925!3.40e-13!169;UBERON:0006595!3.40e-13!169;UBERON:0001007!1.08e-12!155;UBERON:0001555!1.08e-12!155;UBERON:0007026!1.08e-12!155;UBERON:0009497!4.05e-11!25;UBERON:0000015!4.05e-11!25;UBERON:0002423!4.05e-11!25;UBERON:0006235!4.05e-11!25;UBERON:0004161!4.05e-11!25;UBERON:0000077!4.15e-10!130;UBERON:0003929!1.83e-09!54;UBERON:0002294!6.92e-09!7;UBERON:0001173!6.92e-09!7;UBERON:0004912!6.92e-09!7;UBERON:0002108!9.30e-09!14;UBERON:0000473!4.63e-08!8;UBERON:0008835!6.99e-08!22;UBERON:0003894!6.99e-08!22;UBERON:0009854!1.70e-07!23;UBERON:0005911!2.49e-07!82;UBERON:0007499!8.14e-07!25 | |ontology_enrichment_uberon=UBERON:0005409!1.33e-15!35;UBERON:0000160!6.45e-15!27;UBERON:0004921!7.66e-14!129;UBERON:0004185!7.66e-14!129;UBERON:0004119!3.40e-13!169;UBERON:0000925!3.40e-13!169;UBERON:0006595!3.40e-13!169;UBERON:0001007!1.08e-12!155;UBERON:0001555!1.08e-12!155;UBERON:0007026!1.08e-12!155;UBERON:0009497!4.05e-11!25;UBERON:0000015!4.05e-11!25;UBERON:0002423!4.05e-11!25;UBERON:0006235!4.05e-11!25;UBERON:0004161!4.05e-11!25;UBERON:0000077!4.15e-10!130;UBERON:0003929!1.83e-09!54;UBERON:0002294!6.92e-09!7;UBERON:0001173!6.92e-09!7;UBERON:0004912!6.92e-09!7;UBERON:0002108!9.30e-09!14;UBERON:0000473!4.63e-08!8;UBERON:0008835!6.99e-08!22;UBERON:0003894!6.99e-08!22;UBERON:0009854!1.70e-07!23;UBERON:0005911!2.49e-07!82;UBERON:0007499!8.14e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;7.00e-21;4!UBERON:0001242;1.21e-20;4!UBERON:0001262;1.21e-20;4!UBERON:0004786;1.21e-20;4!UBERON:0004808;1.21e-20;4!UBERON:0001277;1.21e-20;4!UBERON:0004907;6.40e-17;5!UBERON:0000485;3.07e-12;7!UBERON:0003929;3.07e-12;7!UBERON:0003350;7.86e-11;8!UBERON:0000160;1.49e-10;17!UBERON:0005409;2.16e-08;22!UBERON:0000059;3.25e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,7.00e-21,4;UBERON:0001242,1.15e-20,4;UBERON:0001262,1.15e-20,4;UBERON:0004786,1.15e-20,4;UBERON:0004808,1.15e-20,4;UBERON:0001277,1.15e-20,4;UBERON:0004907,6.40e-17,5;UBERON:0003350,7.67e-11,8;UBERON:0000160,1.46e-10,17;UBERON:0001046,4.44e-10,19;UBERON:0000485,9.65e-10,9;UBERON:0000059,3.25e-08,11;UBERON:0005409,1.71e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38406458856542,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0.537063524026827,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,5.93682900022551,0,0,0.530745387020035,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0.195551382734803,0,0.640358984218058,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,12.8145544480199,0.86661500537946,0.741742725430498,0.606631894687664,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36869470307464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07489822305536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,6.16598759290336,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894843454382338,0.392600934460972,20.360293472039,0,0,0,0,0.233939463462106,0,0,0,0,0,0.463044948647668,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.407955318967927,0.534434810531121,20.8601421944098,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0.718601616852695,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38406458856542,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0.537063524026827,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,5.93682900022551,0,0,0.530745387020035,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0.195551382734803,0,0.640358984218058,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,12.8145544480199,0.86661500537946,0.741742725430498,0.606631894687664,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36869470307464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07489822305536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,6.16598759290336,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894843454382338,0.392600934460972,20.360293472039,0,0,0,0,0.233939463462106,0,0,0,0,0,0.463044948647668,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.407955318967927,0.534434810531121,20.8601421944098,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0.718601616852695,0,0,0,0,0,0 | ||
|short_description=p@chr16:29841027..29841052,+ | |short_description=p@chr16:29841027..29841052,+ | ||
}} | }} |
Latest revision as of 07:56, 25 July 2015
Short description: | p@chr16:29841027..29841052, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29841027..29841052, + |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.15e-20 | 4 |
epithelial cell of large intestine | 2.73e-11 | 2 |
epithelial cell of prostate | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
rectum | 7.00e-21 | 4 |
intestinal mucosa | 1.15e-20 | 4 |
wall of intestine | 1.15e-20 | 4 |
gastrointestinal system mucosa | 1.15e-20 | 4 |
gastrointestinal system epithelium | 1.15e-20 | 4 |
intestinal epithelium | 1.15e-20 | 4 |
lower digestive tract | 6.40e-17 | 5 |
epithelium of mucosa | 7.67e-11 | 8 |
intestine | 1.46e-10 | 17 |
hindgut | 4.44e-10 | 19 |
simple columnar epithelium | 9.65e-10 | 9 |
large intestine | 3.25e-08 | 11 |
gastrointestinal system | 1.71e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.02e-11 | 2 |