FFCP PHASE1:Hg19::chr16:29840929..29840977,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:29840929..29840977,+ to FFCP PHASE1:Hg19::chr16:29840929..29840977,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:29840929..29840977,+ | |||
|coexpression_cluster_id=C3557 | |||
|description=CAGE_peak_at_chr16:29840929..29840977,+ | |||
|id=chr16:29840929..29840977,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.34e-16!12;CL:0000417!7.34e-16!12;CL:0000668!7.34e-16!12;CL:0000414!7.34e-16!12;CL:0000412!7.34e-16!12;CL:0000182!7.34e-16!12;CL:0000223!8.85e-12!59;CL:0000066!4.16e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.41e-27;12!CL:0002563;1.46e-14;4!CL:0002253;3.82e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.69e-27,12;CL:0002563,1.51e-14,4;CL:0000223,5.57e-14,58;CL:0002253,3.82e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.90e-19;11!UBERON:0009497;1.64e-16;13!UBERON:0003104;3.83e-15;31!CL:0000223;3.58e-09;58!UBERON:0001041;2.68e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.10e-16!106;DOID:0050687!5.46e-12!143;DOID:3493!2.81e-09!2;DOID:162!1.40e-07!235;DOID:14566!2.75e-07!239;DOID:299!7.91e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.56e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.56e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.60e-14!129;UBERON:0004185!3.60e-14!129;UBERON:0001007!4.14e-14!155;UBERON:0001555!4.14e-14!155;UBERON:0007026!4.14e-14!155;UBERON:0004119!2.25e-12!169;UBERON:0000925!2.25e-12!169;UBERON:0006595!2.25e-12!169;UBERON:0009497!1.51e-11!25;UBERON:0000015!1.51e-11!25;UBERON:0002423!1.51e-11!25;UBERON:0006235!1.51e-11!25;UBERON:0004161!1.51e-11!25;UBERON:0005409!2.95e-11!35;UBERON:0008835!1.33e-10!22;UBERON:0003894!1.33e-10!22;UBERON:0009854!4.42e-10!23;UBERON:0000160!4.53e-10!27;UBERON:0003929!8.99e-10!54;UBERON:0002107!1.27e-09!19;UBERON:0006925!1.27e-09!19;UBERON:0008836!1.27e-09!19;UBERON:0000077!2.92e-09!130;UBERON:0007499!3.66e-09!25;UBERON:0009856!9.30e-09!26;UBERON:0000473!5.09e-08!8;UBERON:0001041!1.52e-07!98;UBERON:0005911!1.58e-07!82;UBERON:0005057!9.49e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.59e-18;17!UBERON:0002107;2.64e-17;19!UBERON:0006925;2.64e-17;19!UBERON:0001242;1.46e-14;4!UBERON:0001262;1.46e-14;4!UBERON:0004786;1.46e-14;4!UBERON:0004808;1.46e-14;4!UBERON:0001277;1.46e-14;4!UBERON:0005409;1.67e-14;22!UBERON:0001052;2.41e-14;4!UBERON:0002423;3.71e-13;25!UBERON:0004907;1.15e-11;5!UBERON:0002108;1.38e-11;4!UBERON:0002365;3.14e-10;31!UBERON:0002330;3.14e-10;31!UBERON:0002368;1.71e-09;33!UBERON:0000485;1.03e-08;7!UBERON:0003929;1.03e-08;7!UBERON:0004921;2.54e-08;33!UBERON:0001007;6.11e-08;81!UBERON:0003350;9.87e-08;8!UBERON:0000949;3.11e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.78e-18,17;UBERON:0002107,2.11e-17,19;UBERON:0006925,2.11e-17,19;UBERON:0008836,2.11e-17,19;UBERON:0003929,4.53e-15,54;UBERON:0008835,4.93e-15,22;UBERON:0003894,4.93e-15,22;UBERON:0001242,1.51e-14,4;UBERON:0001262,1.51e-14,4;UBERON:0004786,1.51e-14,4;UBERON:0004808,1.51e-14,4;UBERON:0001277,1.51e-14,4;UBERON:0009854,2.22e-14,23;UBERON:0001052,2.41e-14,4;UBERON:0007499,3.13e-13,25;UBERON:0009497,3.13e-13,25;UBERON:0000015,3.13e-13,25;UBERON:0002423,3.13e-13,25;UBERON:0006235,3.13e-13,25;UBERON:0004161,3.13e-13,25;UBERON:0005409,8.49e-13,25;UBERON:0009856,1.01e-12,26;UBERON:0004921,2.95e-12,118;UBERON:0004907,1.15e-11,5;UBERON:0002108,1.58e-11,4;UBERON:0002365,1.15e-10,31;UBERON:0002330,1.15e-10,31;UBERON:0001007,9.56e-10,145;UBERON:0001555,9.56e-10,145;UBERON:0007026,9.56e-10,145;UBERON:0005911,1.16e-09,82;UBERON:0002368,1.93e-09,35;UBERON:0004119,1.03e-08,160;UBERON:0000925,1.03e-08,160;UBERON:0006595,1.03e-08,160;UBERON:0002530,8.22e-08,59;UBERON:0003350,1.00e-07,8;UBERON:0000949,2.52e-07,45;UBERON:0011216,5.40e-07,223;UBERON:0000485,5.86e-07,9;UBERON:0001046,6.11e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,3.19769940212095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50492403815704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08871057162187,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292357268344742,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0.864542502924636,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,1.96957955768059,1.7307330260045,1.88729922791718,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79369063011563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0.588901401691458,9.63151607359928,0,0,0,0,0.233939463462106,0,0,0,0.109940516745429,0,2.70109553377806,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0.26721740526556,1.01084389488329,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,3.19769940212095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50492403815704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08871057162187,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292357268344742,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0.864542502924636,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,1.96957955768059,1.7307330260045,1.88729922791718,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79369063011563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0.588901401691458,9.63151607359928,0,0,0,0,0.233939463462106,0,0,0,0.109940516745429,0,2.70109553377806,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0.26721740526556,1.01084389488329,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr16:29840929..29840977,+ | |||
}} | }} |
Latest revision as of 07:56, 25 July 2015
Short description: | p@chr16:29840929..29840977, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29840929..29840977, + |
Coexpression cluster: | C3557_signet_Prostate_Intestinal_lung_colon_rectal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.69e-27 | 12 |
intestinal epithelial cell | 1.51e-14 | 4 |
endodermal cell | 5.57e-14 | 58 |
epithelial cell of large intestine | 3.82e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.56e-08 | 2 |