FFCP PHASE1:Hg19::chr15:91565390..91565427,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-421bp_to_ENST00000556904_5end | |association_with_transcript=-421bp_to_ENST00000556904_5end | ||
|cluster_id=chr15:91565390..91565427,+ | |||
|description=CAGE_peak_1_at_ENST00000556904_5end | |description=CAGE_peak_1_at_ENST00000556904_5end | ||
|id=chr15:91565390..91565427,+ | |id=chr15:91565390..91565427,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.02e-14!43;CL:0000223!6.97e-11!59;CL:0002251!1.17e-10!21;CL:0000066!1.88e-10!254;CL:0002159!4.47e-10!13;CL:0000076!1.14e-09!62;CL:0002368!2.44e-08!13;CL:0000154!5.86e-07!6 | |ontology_enrichment_celltype=CL:0002076!4.02e-14!43;CL:0000223!6.97e-11!59;CL:0002251!1.17e-10!21;CL:0000066!1.88e-10!254;CL:0002159!4.47e-10!13;CL:0000076!1.14e-09!62;CL:0002368!2.44e-08!13;CL:0000154!5.86e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.12e-24;42!CL:0002251;9.97e-19;20!CL:0002368;1.13e-15;13!CL:0000244;1.40e-14;4!CL:0000731;1.40e-14;4!CL:0002159;2.29e-14;14!CL:0000154;3.04e-14;6!CL:0000622;1.75e-11;5!CL:0002621;3.26e-11;3!CL:0000307;3.50e-10;3!CL:0000240;2.28e-09;6!CL:0000311;2.28e-09;6!CL:0000079;2.28e-09;6!CL:0000237;2.28e-09;6!CL:0000362;3.20e-09;9!CL:0002202;7.34e-09;9!CL:0002632;7.34e-09;9!CL:0000764;9.52e-09;2!CL:0000558;9.52e-09;2!CL:0002327;1.04e-08;4!CL:0000317;1.11e-07;2!CL:1000448;1.11e-07;2!CL:0002308;1.11e-07;2!CL:0002140;1.11e-07;2!CL:0002077;2.87e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.15e-30,42;CL:0000223,7.62e-23,58;CL:0002251,1.08e-18,20;CL:0000066,7.31e-17,253;CL:0002368,2.12e-15,13;CL:0000154,1.29e-14,6;CL:0002159,1.42e-14,14;CL:0000244,1.95e-14,4;CL:0000731,1.95e-14,4;CL:0000622,9.01e-12,5;CL:0002621,3.69e-11,3;CL:0000068,5.72e-10,3;CL:0000069,5.72e-10,3;CL:0000307,5.72e-10,3;CL:0000377,5.72e-10,3;CL:0000076,5.92e-10,63;CL:0000240,1.89e-09,6;CL:0000311,1.89e-09,6;CL:0000079,1.89e-09,6;CL:0000237,1.89e-09,6;CL:0000036,1.89e-09,6;CL:0000357,1.89e-09,6;CL:0000114,1.89e-09,6;CL:0000362,2.10e-09,9;CL:0000764,9.55e-09,2;CL:0000765,9.55e-09,2;CL:0000050,9.55e-09,2;CL:0000038,9.55e-09,2;CL:0000558,9.55e-09,2;CL:0000547,9.55e-09,2;CL:0000549,9.55e-09,2;CL:0000550,9.55e-09,2;CL:0000552,9.55e-09,2;CL:0002327,1.08e-08,4;CL:0002202,1.27e-08,9;CL:0002632,1.27e-08,9;CL:0002077,4.24e-08,34;CL:0000317,6.32e-08,2;CL:1000448,6.32e-08,2;CL:0002308,6.32e-08,2;CL:0002140,6.32e-08,2;CL:0002321,2.87e-07,250;CL:0000312,9.81e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.56e-13;58!CL:0000377;3.50e-10;3!CL:0000357;2.28e-09;6!CL:0000114;2.28e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!3.73e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.00e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.39e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!5.18e-10!72;UBERON:0004119!3.52e-08!169;UBERON:0000925!3.52e-08!169;UBERON:0006595!3.52e-08!169;UBERON:0000344!1.19e-07!12;UBERON:0000161!1.54e-07!35;UBERON:0000065!2.28e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;8.01e-16;13!UBERON:0003343;6.00e-14;4!UBERON:0004785;6.00e-14;4!UBERON:0000486;1.38e-13;12!UBERON:0000161;2.61e-13;19!UBERON:0000166;2.61e-13;19!UBERON:0000365;1.13e-11;5!UBERON:0001949;3.26e-11;3!UBERON:0000165;1.60e-10;28!UBERON:0000344;8.45e-10;20!UBERON:0005910;9.96e-10;6!UBERON:0000974;2.57e-09;6!UBERON:0001911;1.04e-08;4!UBERON:0002419;1.11e-07;2!UBERON:0007771;1.11e-07;2!UBERON:0003297;1.11e-07;2!UBERON:0001821;1.11e-07;2!UBERON:0003487;1.11e-07;2!UBERON:0001820;1.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,9.29e-16,13;UBERON:0003343,7.15e-14,4;UBERON:0004785,7.15e-14,4;UBERON:0000365,1.48e-11,5;UBERON:0003102,2.40e-11,99;UBERON:0000166,2.97e-11,22;UBERON:0001949,3.69e-11,3;UBERON:0000033,3.04e-10,56;UBERON:0000165,4.31e-10,29;UBERON:0000930,4.31e-10,29;UBERON:0000344,9.26e-10,20;UBERON:0005910,1.24e-09,6;UBERON:0000161,1.88e-09,36;UBERON:0001004,2.95e-09,74;UBERON:0000153,6.35e-09,62;UBERON:0007811,6.35e-09,62;UBERON:0001444,6.59e-09,49;UBERON:0001911,1.08e-08,4;UBERON:0005333,1.08e-08,4;UBERON:0008425,1.08e-08,4;UBERON:0005311,1.08e-08,4;UBERON:0002419,6.32e-08,2;UBERON:0007771,6.32e-08,2;UBERON:0003297,6.32e-08,2;UBERON:0001821,6.32e-08,2;UBERON:0003487,6.32e-08,2;UBERON:0001820,6.32e-08,2;UBERON:0005089,6.32e-08,2;UBERON:0005088,6.32e-08,2;UBERON:0004119,4.04e-07,160;UBERON:0000925,4.04e-07,160;UBERON:0006595,4.04e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,2.10844143144775,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.255725123687061,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0.728590576585084,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,1.3082821564276,0,0,0,0,0.709336764396714,0,0,0.24666754841716,0,0,0.326923806226917,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302256294682921,0,2.12586938479627,2.45471508531751,2.29443676311203,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0,0.474541238222193,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.368965315629341,0,2.96325770603289,2.24803506515239,1.40740561376283,2.31471112896324,0,1.03993478527958,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,3.74935335947108,0.671928512795438,1.55952606966625,2.05984602216551,4.35950907770943,2.68367875415648,0,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0.791951872933429,0.904318131178758,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.232420756919918,0,3.20810352485256,2.02578175658972,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,6.79705617602397,6.53588627562251,0,0,0,0.103041011647722,0,0.082509499920588,1.72279661398852,2.60024098414608,1.6068392984416,0,0,0,0,0,0,0,0,5.78497203763423,3.45942121257191,0.893288987462089,3.2370489873776,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0,0,0,0,1.34710957815717,1.34060455107157,1.08890984861323,0,2.15252686335615,3.36942951335251,2.21715076768338,2.29723400206959,0.507447609232169,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,2.46174797895425,1.89318974933188,0,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.398495976502139,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0.7812832832557,0.0874599999961957,0,1.70690172428249,0,0,1.03423011972439,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,4.74040730547251,0.0769502585037971,0,0.46112780877612,0.448788222048861,0.217294743844016,0,0,0,0,0.31396051279005,0.664846727600626,2.25595660617181,0.980312671588698,2.01385904371011,1.70778359451767,0.794682894901893,0,0,0.282706142867882,0,0,0,0,0,0.123563938946503,0.835375596043643,0.134802265961354,0.802577647298789,0,0,0.391329237864179,0.485560759068186,0.394584402849391,0,0,0,0.450970258243478,0.518440956986236,0,0,0,1.19472429772959,0,0,0,1.56787835863004,0.957651272384428,0.17472666824203,0,0.19351266257817,0.292357268344742,0.164230914106418,0.775912131907355,0,0.225980740780532,0,0.19871461170299,0,0,0,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0.432164393964449,0,1.17847017308398,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0.121499113316049,4.69608562638973,0.0788057072991982,0,0,0,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0.738832686744051,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,0.124192805882767,0.138348634936231,0.624902039810533,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0.219284049578707,0,0.192914038270915,0.506827321959218,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0.132864840313363,0,0,0,0.422624246717254,0.59996218756479,0,0.172214979660816,0,0.184105950251841,1.53867458491389,1.86623178009892,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0.138314504928436,0,1.42769420259154,4.02405645854205,2.3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| 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| ||
|short_description=p1@ENST00000556904 | |short_description=p1@ENST00000556904 | ||
}} | }} |
Latest revision as of 05:38, 25 July 2015
Short description: | p1@ENST00000556904 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000556904_5end |
Coexpression cluster: | NA |
Association with transcript: | -421bp_to_ENST00000556904_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mouth mucosa | 9.29e-16 | 13 |
mucosa of oral region | 7.15e-14 | 4 |
respiratory system mucosa | 7.15e-14 | 4 |
urothelium | 1.48e-11 | 5 |
surface structure | 2.40e-11 | 99 |
oral opening | 2.97e-11 | 22 |
gingival epithelium | 3.69e-11 | 3 |
head | 3.04e-10 | 56 |
mouth | 4.31e-10 | 29 |
stomodeum | 4.31e-10 | 29 |
mucosa | 9.26e-10 | 20 |
transitional epithelium | 1.24e-09 | 6 |
orifice | 1.88e-09 | 36 |
respiratory system | 2.95e-09 | 74 |
anterior region of body | 6.35e-09 | 62 |
craniocervical region | 6.35e-09 | 62 |
subdivision of head | 6.59e-09 | 49 |
mammary gland | 1.08e-08 | 4 |
mammary bud | 1.08e-08 | 4 |
mammary ridge | 1.08e-08 | 4 |
mammary placode | 1.08e-08 | 4 |
skin gland | 6.32e-08 | 2 |
epidermis gland | 6.32e-08 | 2 |
gland of integumental system | 6.32e-08 | 2 |
sebaceous gland | 6.32e-08 | 2 |
skin sebaceous gland | 6.32e-08 | 2 |
sweat gland | 6.32e-08 | 2 |
sweat gland placode | 6.32e-08 | 2 |
sebaceous gland placode | 6.32e-08 | 2 |
endoderm-derived structure | 4.04e-07 | 160 |
endoderm | 4.04e-07 | 160 |
presumptive endoderm | 4.04e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.39e-14 | 14 |