FFCP PHASE1:Hg19::chr15:79296531..79296547,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:79296531..79296547,- | |||
|coexpression_cluster_id=C3519 | |coexpression_cluster_id=C3519 | ||
|description=CAGE_peak_at_chr15:79296531..79296547,- | |description=CAGE_peak_at_chr15:79296531..79296547,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1001319;6.66e-15;1!CL:1000600;6.66e-15;1!CL:0000222;2.11e-14;1!CL:0002535;3.69e-08;2 | |ontology_enrichment_celltype_v019=CL:1001319;6.66e-15;1!CL:1000600;6.66e-15;1!CL:0000222;2.11e-14;1!CL:0002535;3.69e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,7.13e-15,1;CL:1000600,7.13e-15,1;CL:0002535,3.82e-08,2;CL:0000076,2.44e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.58e-11;5!UBERON:0008814;5.37e-08;2!UBERON:0010056;5.37e-08;2 | |ontology_enrichment_development_v019=UBERON:0007123;1.58e-11;5!UBERON:0008814;5.37e-08;2!UBERON:0010056;5.37e-08;2 | ||
|ontology_enrichment_disease=DOID:1749!5.06e-14!14;DOID:1909!9.28e-08!2;DOID:162!1.67e-07!235;DOID:14566!3.50e-07!239 | |ontology_enrichment_disease=DOID:1749!5.06e-14!14;DOID:1909!9.28e-08!2;DOID:162!1.67e-07!235;DOID:14566!3.50e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:1909;5.33e-27;2!DOID:1749;7.07e-24;14!DOID:3112;1.07e-14;1!DOID:7;8.53e-08;39 | |ontology_enrichment_disease_v019=DOID:1909;5.33e-27;2!DOID:1749;7.07e-24;14!DOID:3112;1.07e-14;1!DOID:7;8.53e-08;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,5.34e-27,2;DOID:1749,8.16e-24,14;DOID:3112,1.07e-14,1;DOID:0050687,5.94e-10,143;DOID:305,3.22e-09,106;DOID:7,1.65e-08,39;DOID:162,5.06e-08,235;DOID:14566,8.03e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002106!4.09e-09!3;UBERON:0004854!4.09e-09!3;UBERON:0009034!4.09e-09!3;UBERON:0002095!4.09e-09!3;UBERON:0004782!4.09e-09!3;UBERON:0003281!4.09e-09!3;UBERON:0009664!4.09e-09!3;UBERON:0002296!4.09e-09!3;UBERON:0005602!4.09e-09!3;UBERON:0001179!4.09e-09!3;UBERON:0006293!4.09e-09!3 | |ontology_enrichment_uberon=UBERON:0002106!4.09e-09!3;UBERON:0004854!4.09e-09!3;UBERON:0009034!4.09e-09!3;UBERON:0002095!4.09e-09!3;UBERON:0004782!4.09e-09!3;UBERON:0003281!4.09e-09!3;UBERON:0009664!4.09e-09!3;UBERON:0002296!4.09e-09!3;UBERON:0005602!4.09e-09!3;UBERON:0001179!4.09e-09!3;UBERON:0006293!4.09e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;6.66e-15;1!UBERON:0001256;6.66e-15;1!UBERON:0001259;6.66e-15;1!UBERON:0003343;1.78e-14;4!UBERON:0004785;1.78e-14;4!UBERON:0002046;1.58e-11;5!UBERON:0000974;5.81e-10;6!UBERON:0006955;3.69e-08;2!UBERON:0004801;3.69e-08;2!UBERON:0001255;4.23e-08;2!UBERON:0001556;4.23e-08;2!UBERON:0006562;7.52e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0004645;6.66e-15;1!UBERON:0001256;6.66e-15;1!UBERON:0001259;6.66e-15;1!UBERON:0003343;1.78e-14;4!UBERON:0004785;1.78e-14;4!UBERON:0002046;1.58e-11;5!UBERON:0000974;5.81e-10;6!UBERON:0006955;3.69e-08;2!UBERON:0004801;3.69e-08;2!UBERON:0001255;4.23e-08;2!UBERON:0001556;4.23e-08;2!UBERON:0006562;7.52e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.13e-15,1;UBERON:0001256,7.13e-15,1;UBERON:0001259,7.13e-15,1;UBERON:0003343,1.85e-14,4;UBERON:0004785,1.85e-14,4;UBERON:0002046,1.42e-11,5;UBERON:0004117,1.42e-11,5;UBERON:0007689,1.42e-11,5;UBERON:0007123,1.42e-11,5;UBERON:0003091,1.42e-11,5;UBERON:0006955,3.82e-08,2;UBERON:0004801,3.82e-08,2;UBERON:0001255,4.38e-08,2;UBERON:0001556,4.38e-08,2;UBERON:0008814,3.25e-07,18 | |||
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| ||
|short_description=p@chr15:79296531..79296547,- | |short_description=p@chr15:79296531..79296547,- | ||
}} | }} |
Latest revision as of 04:39, 25 July 2015
Short description: | p@chr15:79296531..79296547, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:79296531..79296547, - |
Coexpression cluster: | C3519_epidermoid_oral_transitionalcell_astrocytoma_malignant_pharyngeal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 7.13e-15 | 1 |
lower urinary tract cell | 7.13e-15 | 1 |
epithelial cell of cervix | 3.82e-08 | 2 |
squamous epithelial cell | 2.44e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 7.13e-15 | 1 |
wall of urinary bladder | 7.13e-15 | 1 |
mucosa of urinary bladder | 7.13e-15 | 1 |
mucosa of oral region | 1.85e-14 | 4 |
respiratory system mucosa | 1.85e-14 | 4 |
thyroid gland | 1.42e-11 | 5 |
pharyngeal pouch | 1.42e-11 | 5 |
thyroid diverticulum | 1.42e-11 | 5 |
pharyngeal pouch 2 | 1.42e-11 | 5 |
thyroid primordium | 1.42e-11 | 5 |
uterine epithelium | 3.82e-08 | 2 |
cervix epithelium | 3.82e-08 | 2 |
urinary bladder | 4.38e-08 | 2 |
lower urinary tract | 4.38e-08 | 2 |
pharyngeal arch system | 3.25e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.34e-27 | 2 |
squamous cell carcinoma | 8.16e-24 | 14 |
papillary adenocarcinoma | 1.07e-14 | 1 |
cell type cancer | 5.94e-10 | 143 |
carcinoma | 3.22e-09 | 106 |
disease of anatomical entity | 1.65e-08 | 39 |
cancer | 5.06e-08 | 235 |
disease of cellular proliferation | 8.03e-08 | 239 |