FFCP PHASE1:Hg19::chr15:75052999..75053003,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:75052999..75053003,- | |||
|coexpression_cluster_id=C595 | |||
|description=CAGE_peak_at_chr15:75052999..75053003,- | |description=CAGE_peak_at_chr15:75052999..75053003,- | ||
|id=chr15:75052999..75053003,- | |id=chr15:75052999..75053003,- | ||
|ontology_enrichment_celltype=CL:0000066!5.67e-19!254;CL:0002319!7.54e-09!25;CL:0000133!2.24e-08!59;CL:0000333!6.99e-08!41;CL:0000012!7.68e-08!682;CL:0000095!1.34e-07!17;CL:0000123!1.34e-07!17;CL:0000548!1.72e-07!679;CL:0000004!1.72e-07!679;CL:0000255!1.72e-07!679;CL:0000243!3.78e-07!15;CL:0000125!3.78e-07!15;CL:0000030!3.78e-07!15;CL:0000339!3.78e-07!15;CL:0002321!7.99e-07!248 | |ontology_enrichment_celltype=CL:0000066!5.67e-19!254;CL:0002319!7.54e-09!25;CL:0000133!2.24e-08!59;CL:0000333!6.99e-08!41;CL:0000012!7.68e-08!682;CL:0000095!1.34e-07!17;CL:0000123!1.34e-07!17;CL:0000548!1.72e-07!679;CL:0000004!1.72e-07!679;CL:0000255!1.72e-07!679;CL:0000243!3.78e-07!15;CL:0000125!3.78e-07!15;CL:0000030!3.78e-07!15;CL:0000339!3.78e-07!15;CL:0002321!7.99e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002321;5.43e-10;15!CL:0000039;8.93e-10;7!CL:0000586;8.93e-10;7!CL:0002322;1.56e-08;5!CL:0000333;2.49e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.90e-10,7;CL:0000586,6.90e-10,7;CL:0000066,4.73e-09,253;CL:0002322,1.60e-08,5;CL:0000133,3.53e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.09e-56!235;DOID:14566!6.13e-56!239;DOID:0050687!7.18e-38!143;DOID:305!2.08e-25!106;DOID:0050686!2.12e-23!137;DOID:3095!4.27e-11!22;DOID:2994!4.27e-11!22;DOID:2531!5.43e-08!51;DOID:0060083!5.43e-08!51;DOID:1749!1.95e-07!14;DOID:7!2.46e-07!39 | |ontology_enrichment_disease=DOID:162!2.09e-56!235;DOID:14566!6.13e-56!239;DOID:0050687!7.18e-38!143;DOID:305!2.08e-25!106;DOID:0050686!2.12e-23!137;DOID:3095!4.27e-11!22;DOID:2994!4.27e-11!22;DOID:2531!5.43e-08!51;DOID:0060083!5.43e-08!51;DOID:1749!1.95e-07!14;DOID:7!2.46e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.45e-17;22!DOID:2994;4.45e-17;22!DOID:0050687;1.28e-10;143!DOID:1036;1.66e-07;8!DOID:1749;1.79e-07;14!DOID:14566;1.81e-07;239!DOID:162;3.24e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,8.60e-41,239;DOID:162,3.78e-40,235;DOID:0050687,2.67e-31,143;DOID:305,9.96e-19,106;DOID:3095,2.90e-17,22;DOID:2994,2.90e-17,22;DOID:0050686,2.83e-13,137;DOID:1749,1.13e-07,14;DOID:1036,1.93e-07,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.49e-07;5!UBERON:0002410;2.49e-07;5!UBERON:0000010;8.64e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.24e-07,5;UBERON:0002410,2.24e-07,5;UBERON:0000010,7.51e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.436882744260345,0.263766978228454,0.74259811776028,0.331397375727916,0,0,0,0,0.61560529038394,0.204000691244253,0.313454721478088,0.286235987131057,0.684372125364421,0.251085279189606,0.305653622991805,0.492603536699674,0.0787107813136792,0,0,0,0,1.204823675113,1.10926203050036,1.78174561334694,3.9807385096478,1.76160263600908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,1.32171328579026,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,1.77383517970051,3.33772185633879,0.392937226493138,0,0.370784442784429,0,0,0,0,0.571994910780128,0.371457501329565,0.79504962946682,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0.735326160691737,0,0.0892997282840798,0,0.225222960966644,3.06633274931766,0,0.366403487860815,0,0,0,0,0.12663051166458,0,1.14734648299525,0.709336764396714,0,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0.352303495931295,0,0.98315564691574,0,0,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0.340296549480063,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0.843881661206331,0.0974370051611986,0.504867548488229,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,30.1275054140101,23.8553582978673,17.0805096018192,12.1283434367983,18.4194221139209,36.8627132666588,0,0,0,0,0,0.354920400119532,0,0,0.110293972732394,0.217879444092406,0.71181185733329,0,0.196221465125346,0,1.4763109092493,0,0.8231480226628,0,0,0,0,0.441463099414651,0.122988438543114,1.20097467208968,0,0,0.301586917234893,0.648119116109707,0,0,2.88662684050547,0.34779121492523,0.234817388471643,0,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.53735113621709,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0.336393253036082,0.43596006883328,0.2933531432838,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,1.64648067356154,0.325736184293735,0,1.58390374586686,0,0,0,0,0,0,0,0,1.42636905040718,0,0.410952645100767,0,0.672510863961164,0,0,0,0,1.30139853857622,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0.280660094433074,0,0,0,0,0,0.532685175939381,0.657017248110473,0,0.348631135379878,0.241718899183244,0,0,0,0.182091168006717,0,0.451199612907412,0.15403067420883,2.35304930753057,0,0.105551628892876,0,0,1.0795795805107,0,0.541892875087706,0,0.509752546090077,0,1.11937377361089,0,0,2.3080511260475,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0.462145851343933,0.460511024178389,1.51620229732984,0.322260734604821,0.580066775656914,0.426133137080504,0.0890320356467374,0,0.192190067365106,2.29702882490251,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0,0,0,0.211107635297664,0,0.75894634753143,0,0.384888450902048,2.01090682660736,2.17781969722645,0,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,51.3823782123146,0.962479855263359,3.18552280775341,0.743212700502875,9.08896041751603,1.13826949357463,1.27541018183058,2.3949524571938,0.191505370132367,0,0.324621940274555,0.280797178113459,0.228234679033192,0.47003968731907,2.50634477090067,1.18504244461122,0,0.201799707191048,0.851692475380653,0.343505344755765,0,0,0.166849141711909,0,0,3.69262196843137,0.540911356951966,3.3307196799782,0,1.68426486367398,0,1.09224469574562,0.222886768554957,2.84136146806413,0,0.296964680832639,0,0,0,0.111308705022906,0.16480387422676,8.86726714137573,0,0,0.755798243562828,0.511343412510774,0.615424027305347,0,2.78591888556713,0,0,0,0,1.11136990144637,0,0,0,0.260427761085233,0.174919999992391,0,6.25863965570248,1.01701460117107,0.709163045303809,3.10269035917318,1.16641845353302,1.04174996959975,0,0,0,0,0.295547618953547,0,0.544692317594951,0,0,0.91153644677601,5.99466151408956,5.74448924222542,4.12860013303631,0,0,0,1.02193298195737,0.470940769185074,0,2.70714792740617,3.13700054908383,2.51732380463764,14.8007911524864,3.49660473756833,1.68798451622422,1.63232808159148,7.6330658574328,3.24582959613137,0,0,0,2.37216902944498,0.247127877893006,0.208843899010911,0.067401132980677,0,0.234264445725339,0.91227394607833,10.7615540412649,0.485560759068186,0,0,0,0,44.6460555661043,1.55532287095871,0.664653872707185,0.992975867626496,0.627865836814451,1.19472429772959,0,0.554698692052555,3.64475450503775,1.46988596121566,2.69883540399248,0,2.0638323896594,0.483781656445426,0.584714536689484,0.574808199372465,0,0.176512253383001,0,9.72997664991931,4.96786529257474,0,0.391102765469606,1.84365286578528,0,0.19980960958213,0.432271251462318,4.12331746197296,9.437724882408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| ||
|short_description=p@chr15:75052999..75053003,- | |short_description=p@chr15:75052999..75053003,- | ||
}} | }} |
Latest revision as of 04:13, 25 July 2015
Short description: | p@chr15:75052999..75053003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:75052999..75053003, - |
Coexpression cluster: | C595_teratocarcinoma_HES3GFP_H9_testicular_Wilms_hepatoblastoma_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.90e-10 | 7 |
germ cell | 6.90e-10 | 7 |
epithelial cell | 4.73e-09 | 253 |
embryonic stem cell | 1.60e-08 | 5 |
neurectodermal cell | 3.53e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.24e-07 | 5 |
autonomic nervous system | 2.24e-07 | 5 |
peripheral nervous system | 7.51e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 8.60e-41 | 239 |
cancer | 3.78e-40 | 235 |
cell type cancer | 2.67e-31 | 143 |
carcinoma | 9.96e-19 | 106 |
germ cell and embryonal cancer | 2.90e-17 | 22 |
germ cell cancer | 2.90e-17 | 22 |
organ system cancer | 2.83e-13 | 137 |
squamous cell carcinoma | 1.13e-07 | 14 |
chronic leukemia | 1.93e-07 | 8 |