FFCP PHASE1:Hg19::chr15:59064164..59064178,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:59064164..59064178,- | |||
|description=CAGE_peak_at_chr15:59064164..59064178,- | |description=CAGE_peak_at_chr15:59064164..59064178,- | ||
|id=chr15:59064164..59064178,- | |id=chr15:59064164..59064178,- | ||
|ontology_enrichment_celltype=CL:0000066!2.93e-09!254 | |ontology_enrichment_celltype=CL:0000066!2.93e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0002537;9.42e-18;5!CL:0000349;3.60e-17;19!CL:0002541;4.54e-08;3 | |ontology_enrichment_celltype_v019=CL:0002537;9.42e-18;5!CL:0000349;3.60e-17;19!CL:0002541;4.54e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,7.30e-18,5;CL:0000349,4.09e-17,19;CL:0002541,6.50e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;4.29e-07;1!DOID:3369;4.29e-07;1!DOID:3149;4.29e-07;1 | |ontology_enrichment_disease_v019=DOID:3151;4.29e-07;1!DOID:3369;4.29e-07;1!DOID:3149;4.29e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3369,3.95e-07,1;DOID:3151,5.57e-07,1;DOID:3149,5.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.80e-09!14;UBERON:0000158!3.80e-09!14 | |ontology_enrichment_uberon=UBERON:0005631!3.80e-09!14;UBERON:0000158!3.80e-09!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.17e-25;10!UBERON:0000158;1.17e-25;10!UBERON:0000305;2.61e-19;7!UBERON:0000478;7.83e-17;24!UBERON:0003124;4.54e-08;3!UBERON:0000920;4.54e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0005631;1.17e-25;10!UBERON:0000158;1.17e-25;10!UBERON:0000305;2.61e-19;7!UBERON:0000478;7.83e-17;24!UBERON:0003124;4.54e-08;3!UBERON:0000920;4.54e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.34e-30,14;UBERON:0000158,5.34e-30,14;UBERON:0000305,2.01e-19,7;UBERON:0004871,5.66e-17,8;UBERON:0000478,7.08e-17,24;UBERON:0003124,1.24e-12,7;UBERON:0004923,2.28e-09,66;UBERON:0000920,6.50e-08,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0.491467873003018,0,1.31064823278103,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.12663051166458,0,0.286836620748814,0.354668382198357,2.24271040056923,1.06748995729705,0,0,0.269421344139376,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.567160915800105,0.179389635688862,0,0,0,0.103052529238439,0,0.37223371266318,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0.518305275076852,0.252320850875628,0.36497735907583,1.56449532329816,0,0,0,1.44375896333917,0,0,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0.548751427043128,1.1240175325762,0.301586917234893,0.185176890317059,0,0,0,0,0.587043471179108,0,0,0,1.58040879591855,0,0,0,0,0,0.16798212819886,0.283550194484773,0.53735113621709,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,1.32969058292435,4.16029747645464,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0.76228387266739,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,2.07970861530807,0.535286966391485,0.473107245101804,0.468565659970853,0,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0.909382714338778,0,2.11673205330776,0.248107807818777,0.306923946576125,0.561320188866147,0.384417447767103,1.02341449813341,0.482561763430822,0,0,0,0,0,0.116210378459959,0.120859449591622,1.60405176242628,0.644566922551274,0.229628896329213,0.182091168006717,0.131124414959424,0.451199612907412,0.0770153371044148,0,2.92278449306521,0,0,0,0,0,0.270946437543853,1.50506932156456,0.764628819135115,0,0.895499018888713,0,0,0,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0.267096106940212,0,0.192190067365106,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0.272999822815972,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0,0.422215270595328,0,0,0,0,0,2.17781969722645,0.564862804660675,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0.426851060090485,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.43246690842614,0.296964680832639,1.22864280839693,0,0.281338832821026,0,0,1.05562704063997,0,0,0.251932747854276,0.20453736500431,0,0.933118762985422,0.269605053441981,0.179021174675609,0,0,0,1.11136990144637,0,0,5.98841394003583,0,0,0,0.1137934482855,0,0,0,0,0,1.77148277162768,0.361789315876224,0,0.221158519862449,0.591095237907095,0.219385397153973,0.10893846351899,2.64905114129346,0.0769502585037971,0,0.69169171316418,0.179515288819544,2.93347904189422,0.638002319463839,1.19076871422421,1.06606955203727,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0.489698424477443,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,1.36965233252463,0.485560759068186,0.394584402849391,0,0,0.126373159256976,0.901940516486955,0.311064574191741,0,0,0,0,0,0,2.42983633669183,0.881931576729399,0.174118413160805,0.34945333648406,0,0,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0.586654148204409,0.160317640503067,0.213452994739353,0.19980960958213,0.144090417154106,0.229073192331831,0,0.14405479798815,0,0.471388069233591,0.271808412147228,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0.321506296930038,0,0,0,0,0.242998226632099,2.0126081255956,0.236417121897595,0.157363764404994,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0.454947352624943,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0.295710299979268,0.318593534327405,0,0.155262956876259,0,0.265841714557995,0,0.300515217994437,0.761610424337591,0,0,0.214821114084977,0,1.19428766609585,0.4000277646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| ||
|short_description=p@chr15:59064164..59064178,- | |short_description=p@chr15:59064164..59064178,- | ||
}} | }} |
Latest revision as of 02:57, 25 July 2015
Short description: | p@chr15:59064164..59064178, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:59064164..59064178, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 7.30e-18 | 5 |
extraembryonic cell | 4.09e-17 | 19 |
chorionic membrane mesenchymal stem cell | 6.50e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.34e-30 | 14 |
membranous layer | 5.34e-30 | 14 |
amnion | 2.01e-19 | 7 |
somatic layer of lateral plate mesoderm | 5.66e-17 | 8 |
extraembryonic structure | 7.08e-17 | 24 |
chorion | 1.24e-12 | 7 |
organ component layer | 2.28e-09 | 66 |
egg chorion | 6.50e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.95e-07 | 1 |
skin squamous cell carcinoma | 5.57e-07 | 1 |
keratoacanthoma | 5.57e-07 | 1 |