FFCP PHASE1:Hg19::chr15:56311466..56311511,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:56311466..56311511,+ | |||
|coexpression_cluster_id=C3500 | |coexpression_cluster_id=C3500 | ||
|description=CAGE_peak_at_chr15:56311466..56311511,+ | |description=CAGE_peak_at_chr15:56311466..56311511,+ | ||
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|ontology_enrichment_celltype=CL:0000066!9.23e-33!254;CL:0000223!5.05e-15!59;CL:0002076!1.18e-13!43;CL:0002251!6.43e-10!21;CL:0000076!9.37e-08!62 | |ontology_enrichment_celltype=CL:0000066!9.23e-33!254;CL:0000223!5.05e-15!59;CL:0002076!1.18e-13!43;CL:0002251!6.43e-10!21;CL:0000076!9.37e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0002251;4.30e-10;20!CL:0002076;1.44e-07;42 | |ontology_enrichment_celltype_v019=CL:0002251;4.30e-10;20!CL:0002076;1.44e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.85e-28,253;CL:0002251,5.08e-10,20;CL:0000223,1.19e-09,58;CL:0002076,1.85e-09,42;CL:0000076,5.58e-08,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.17e-12;29 | |ontology_enrichment_development_v019=UBERON:0008947;1.17e-12;29 | ||
|ontology_enrichment_disease=DOID:0050687!2.37e-46!143;DOID:305!2.85e-44!106;DOID:14566!1.44e-37!239;DOID:162!7.48e-37!235;DOID:299!1.04e-16!25;DOID:1749!1.77e-12!14;DOID:7!2.79e-10!39 | |ontology_enrichment_disease=DOID:0050687!2.37e-46!143;DOID:305!2.85e-44!106;DOID:14566!1.44e-37!239;DOID:162!7.48e-37!235;DOID:299!1.04e-16!25;DOID:1749!1.77e-12!14;DOID:7!2.79e-10!39 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.50e-17;14!DOID:299;1.61e-16;25!DOID:0050687;9.95e-11;143!DOID:305;1.49e-10;106 | |ontology_enrichment_disease_v019=DOID:1749;4.50e-17;14!DOID:299;1.61e-16;25!DOID:0050687;9.95e-11;143!DOID:305;1.49e-10;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.99e-47,106;DOID:0050687,1.49e-44,143;DOID:14566,1.83e-39,239;DOID:162,4.93e-38,235;DOID:1749,4.25e-17,14;DOID:299,1.83e-16,25;DOID:0050686,6.88e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.27e-12!169;UBERON:0000925!9.27e-12!169;UBERON:0006595!9.27e-12!169;UBERON:0000344!1.43e-10!12;UBERON:0001007!3.54e-10!155;UBERON:0001555!3.54e-10!155;UBERON:0007026!3.54e-10!155;UBERON:0001737!8.95e-10!9;UBERON:0000077!3.00e-08!130;UBERON:0004921!9.83e-08!129;UBERON:0004185!9.83e-08!129;UBERON:0005631!1.22e-07!14;UBERON:0000158!1.22e-07!14;UBERON:0001004!1.23e-07!72;UBERON:0001041!1.81e-07!98;UBERON:0008947!2.47e-07!38;UBERON:0003258!2.47e-07!38;UBERON:0004923!4.41e-07!57;UBERON:0000065!7.83e-07!53 | |ontology_enrichment_uberon=UBERON:0004119!9.27e-12!169;UBERON:0000925!9.27e-12!169;UBERON:0006595!9.27e-12!169;UBERON:0000344!1.43e-10!12;UBERON:0001007!3.54e-10!155;UBERON:0001555!3.54e-10!155;UBERON:0007026!3.54e-10!155;UBERON:0001737!8.95e-10!9;UBERON:0000077!3.00e-08!130;UBERON:0004921!9.83e-08!129;UBERON:0004185!9.83e-08!129;UBERON:0005631!1.22e-07!14;UBERON:0000158!1.22e-07!14;UBERON:0001004!1.23e-07!72;UBERON:0001041!1.81e-07!98;UBERON:0008947!2.47e-07!38;UBERON:0003258!2.47e-07!38;UBERON:0004923!4.41e-07!57;UBERON:0000065!7.83e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.26e-14;9!UBERON:0001557;1.26e-14;9!UBERON:0000072;1.81e-09;37!UBERON:0003343;4.04e-09;4!UBERON:0004785;4.04e-09;4!UBERON:0000344;2.74e-08;20!UBERON:0001004;1.29e-07;65!UBERON:0000065;5.34e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.26e-14;9!UBERON:0001557;1.26e-14;9!UBERON:0000072;1.81e-09;37!UBERON:0003343;4.04e-09;4!UBERON:0004785;4.04e-09;4!UBERON:0000344;2.74e-08;20!UBERON:0001004;1.29e-07;65!UBERON:0000065;5.34e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.03e-15,9;UBERON:0008947,5.29e-10,38;UBERON:0003258,5.29e-10,38;UBERON:0003343,3.47e-09,4;UBERON:0004785,3.47e-09,4;UBERON:0001007,7.42e-09,145;UBERON:0001555,7.42e-09,145;UBERON:0007026,7.42e-09,145;UBERON:0001004,1.47e-08,74;UBERON:0004119,1.67e-08,160;UBERON:0000925,1.67e-08,160;UBERON:0006595,1.67e-08,160;UBERON:0000072,1.88e-08,47;UBERON:0000344,3.15e-08,20;UBERON:0000065,9.10e-08,54;UBERON:0001557,9.38e-08,19;UBERON:0001041,5.75e-07,87 | |||
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| ||
|short_description=p@chr15:56311466..56311511,+ | |short_description=p@chr15:56311466..56311511,+ | ||
}} | }} |
Latest revision as of 02:42, 25 July 2015
Short description: | p@chr15:56311466..56311511, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:56311466..56311511, + |
Coexpression cluster: | C3500_cervical_malignant_squamous_amniotic_endometrial_ductal_epithelioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.85e-28 | 253 |
epithelial cell of alimentary canal | 5.08e-10 | 20 |
endodermal cell | 1.19e-09 | 58 |
endo-epithelial cell | 1.85e-09 | 42 |
squamous epithelial cell | 5.58e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.03e-15 | 9 |
respiratory primordium | 5.29e-10 | 38 |
endoderm of foregut | 5.29e-10 | 38 |
mucosa of oral region | 3.47e-09 | 4 |
respiratory system mucosa | 3.47e-09 | 4 |
digestive system | 7.42e-09 | 145 |
digestive tract | 7.42e-09 | 145 |
primitive gut | 7.42e-09 | 145 |
respiratory system | 1.47e-08 | 74 |
endoderm-derived structure | 1.67e-08 | 160 |
endoderm | 1.67e-08 | 160 |
presumptive endoderm | 1.67e-08 | 160 |
segment of respiratory tract | 1.88e-08 | 47 |
mucosa | 3.15e-08 | 20 |
respiratory tract | 9.10e-08 | 54 |
upper respiratory tract | 9.38e-08 | 19 |
foregut | 5.75e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.99e-47 | 106 |
cell type cancer | 1.49e-44 | 143 |
disease of cellular proliferation | 1.83e-39 | 239 |
cancer | 4.93e-38 | 235 |
squamous cell carcinoma | 4.25e-17 | 14 |
adenocarcinoma | 1.83e-16 | 25 |
organ system cancer | 6.88e-09 | 137 |