FFCP PHASE1:Hg19::chr15:53096695..53096705,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:53096695..53096705,+ | |||
|description=CAGE_peak_at_chr15:53096695..53096705,+ | |description=CAGE_peak_at_chr15:53096695..53096705,+ | ||
|id=chr15:53096695..53096705,+ | |id=chr15:53096695..53096705,+ | ||
|ontology_enrichment_celltype=CL:0000242!1.53e-20!2;CL:0002553!5.05e-11!1;CL:0000312!9.01e-09!5;CL:0000240!1.90e-07!6;CL:0000311!1.90e-07!6;CL:0000079!1.90e-07!6;CL:0000237!1.90e-07!6;CL:0000036!1.90e-07!6;CL:0000357!1.90e-07!6;CL:0000114!1.90e-07!6 | |ontology_enrichment_celltype=CL:0000242!1.53e-20!2;CL:0002553!5.05e-11!1;CL:0000312!9.01e-09!5;CL:0000240!1.90e-07!6;CL:0000311!1.90e-07!6;CL:0000079!1.90e-07!6;CL:0000237!1.90e-07!6;CL:0000036!1.90e-07!6;CL:0000357!1.90e-07!6;CL:0000114!1.90e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.09e-44;2!CL:0000242;1.09e-44;2!CL:0002553;4.10e-23;1!CL:0000312;1.41e-18;5!CL:0000240;1.17e-15;6!CL:0000311;1.17e-15;6!CL:0000079;1.17e-15;6!CL:0000237;1.17e-15;6!CL:0002535;1.96e-12;2!CL:0000362;9.00e-11;9!CL:0002159;2.99e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.79e-45,2;CL:0002553,5.13e-23,1;CL:0000312,1.35e-18,5;CL:0000240,1.13e-15,6;CL:0000311,1.13e-15,6;CL:0000079,1.13e-15,6;CL:0000237,1.13e-15,6;CL:0000036,1.13e-15,6;CL:0000357,1.13e-15,6;CL:0000114,1.13e-15,6;CL:0002535,2.07e-12,2;CL:0000362,8.79e-11,9;CL:0002159,2.95e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.07e-23;1!CL:0000357;1.17e-15;6!CL:0000114;1.17e-15;6 | |||
|ontology_enrichment_disease=DOID:4362!1.27e-08!5 | |ontology_enrichment_disease=DOID:4362!1.27e-08!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002110!1.02e-13!3;UBERON:0006242!1.02e-13!3;UBERON:0000002!2.53e-07!6;UBERON:0001560!2.53e-07!6 | |ontology_enrichment_uberon=UBERON:0002110!1.02e-13!3;UBERON:0006242!1.02e-13!3;UBERON:0000002!2.53e-07!6;UBERON:0001560!2.53e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.96e-12;2!UBERON:0004801;1.96e-12;2!UBERON:0002110;8.31e-09;3!UBERON:0001003;7.98e-07;15!UBERON:0007376;7.98e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.07e-12,2;UBERON:0004801,2.07e-12,2;UBERON:0002110,8.31e-09,3;UBERON:0006242,8.31e-09,3;UBERON:0001003,7.86e-07,15;UBERON:0007376,7.86e-07,15;UBERON:0007383,7.86e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01546198283421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,5.33632486848381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34167452903441,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,1.88126918544609,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01546198283421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,5.33632486848381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34167452903441,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,1.88126918544609,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:53096695..53096705,+ | |short_description=p@chr15:53096695..53096705,+ | ||
}} | }} |
Latest revision as of 02:36, 25 July 2015
Short description: | p@chr15:53096695..53096705, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:53096695..53096705, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.79e-45 | 2 |
lung fibroblast | 5.13e-23 | 1 |
keratinocyte | 1.35e-18 | 5 |
stratified squamous epithelial cell | 1.13e-15 | 6 |
keratin accumulating cell | 1.13e-15 | 6 |
stratified epithelial cell | 1.13e-15 | 6 |
keratinizing barrier epithelial cell | 1.13e-15 | 6 |
epithelial fate stem cell | 1.13e-15 | 6 |
stratified epithelial stem cell | 1.13e-15 | 6 |
surface ectodermal cell | 1.13e-15 | 6 |
epithelial cell of cervix | 2.07e-12 | 2 |
epidermal cell | 8.79e-11 | 9 |
general ecto-epithelial cell | 2.95e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.07e-12 | 2 |
cervix epithelium | 2.07e-12 | 2 |
gallbladder | 8.31e-09 | 3 |
gall bladder primordium | 8.31e-09 | 3 |
skin epidermis | 7.86e-07 | 15 |
outer epithelium | 7.86e-07 | 15 |
enveloping layer of ectoderm | 7.86e-07 | 15 |