FFCP PHASE1:Hg19::chr15:52101025..52101036,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:52101025..52101036,+ | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_at_chr15:52101025..52101036,+ | |description=CAGE_peak_at_chr15:52101025..52101036,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000746;1.41e-09;3!CL:0000737;1.69e-07;4 | |ontology_enrichment_celltype_v019=CL:0000746;1.41e-09;3!CL:0000737;1.69e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.54e-09,3;CL:0000513,1.54e-09,3;CL:0000737,1.80e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;1.41e-09;3!UBERON:0006215;1.41e-09;3 | |ontology_enrichment_development_v019=CL:0000513;1.41e-09;3!UBERON:0006215;1.41e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001871;1.67e-32;6!UBERON:0001874;5.92e-26;1!UBERON:0001893;1.29e-19;34!UBERON:0001950;2.44e-19;20!UBERON:0002791;3.59e-18;32!UBERON:0001869;3.59e-18;32!UBERON:0003528;8.84e-18;34!UBERON:0002020;8.84e-18;34!UBERON:0002619;1.05e-17;22!UBERON:0000956;1.01e-15;25!UBERON:0000203;1.01e-15;25!UBERON:0002771;6.43e-14;2!UBERON:0001876;1.07e-13;2!UBERON:0002420;5.51e-12;9!UBERON:0007245;5.51e-12;9!UBERON:0010009;5.51e-12;9!UBERON:0010011;5.51e-12;9!UBERON:0000454;5.51e-12;9!UBERON:0001017;1.03e-11;75!UBERON:0000955;4.20e-11;68!UBERON:0000073;6.93e-10;53!UBERON:0002616;6.93e-10;53!UBERON:0005383;1.41e-09;3!UBERON:0005382;1.41e-09;3!UBERON:0001016;2.10e-09;83!UBERON:0002780;4.87e-08;41!UBERON:0001890;4.87e-08;41!UBERON:0000369;1.69e-07;4!UBERON:0002435;1.69e-07;4!UBERON:0000204;1.69e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001871;1.67e-32;6!UBERON:0001874;5.92e-26;1!UBERON:0001893;1.29e-19;34!UBERON:0001950;2.44e-19;20!UBERON:0002791;3.59e-18;32!UBERON:0001869;3.59e-18;32!UBERON:0003528;8.84e-18;34!UBERON:0002020;8.84e-18;34!UBERON:0002619;1.05e-17;22!UBERON:0000956;1.01e-15;25!UBERON:0000203;1.01e-15;25!UBERON:0002771;6.43e-14;2!UBERON:0001876;1.07e-13;2!UBERON:0002420;5.51e-12;9!UBERON:0007245;5.51e-12;9!UBERON:0010009;5.51e-12;9!UBERON:0010011;5.51e-12;9!UBERON:0000454;5.51e-12;9!UBERON:0001017;1.03e-11;75!UBERON:0000955;4.20e-11;68!UBERON:0000073;6.93e-10;53!UBERON:0002616;6.93e-10;53!UBERON:0005383;1.41e-09;3!UBERON:0005382;1.41e-09;3!UBERON:0001016;2.10e-09;83!UBERON:0002780;4.87e-08;41!UBERON:0001890;4.87e-08;41!UBERON:0000369;1.69e-07;4!UBERON:0002435;1.69e-07;4!UBERON:0000204;1.69e-07;4 | ||
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|short_description=p@chr15:52101025..52101036,+ | |short_description=p@chr15:52101025..52101036,+ | ||
}} | }} |
Latest revision as of 02:28, 25 July 2015
Short description: | p@chr15:52101025..52101036, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:52101025..52101036, + |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.54e-09 | 3 |
cardiac muscle myoblast | 1.54e-09 | 3 |
striated muscle cell | 1.80e-07 | 4 |