FFCP PHASE1:Hg19::chr15:48826377..48826399,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:48826377..48826399,- to FFCP PHASE1:Hg19::chr15:48826377..48826399,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:48826377..48826399,- | |||
|coexpression_cluster_id=C834 | |||
|description=CAGE_peak_at_chr15:48826377..48826399,- | |||
|id=chr15:48826377..48826399,- | |||
|ontology_enrichment_celltype=CL:0000057!3.83e-25!75;CL:0000055!2.73e-23!180;CL:0002620!1.24e-13!23;CL:0000048!7.82e-13!430;CL:0000723!4.49e-12!436;CL:0000034!1.98e-11!444;CL:0002334!6.78e-11!12;CL:0000136!8.84e-10!15;CL:0000680!3.03e-08!57;CL:0000056!3.03e-08!57;CL:0000355!3.03e-08!57;CL:0002371!1.44e-07!591;CL:0000183!1.74e-07!59;CL:0000187!1.79e-07!54;CL:0002320!2.82e-07!365;CL:0000134!5.94e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:1000306;2.71e-13;4!CL:0002547;2.71e-13;4!CL:0002334;4.42e-12;12!CL:0000136;1.96e-11;13!CL:0002615;2.20e-10;3!CL:0002579;3.77e-10;3!CL:0002620;2.00e-09;23!CL:0000153;2.46e-09;9!CL:0000447;2.46e-09;9!CL:0002617;2.36e-07;2!CL:0000057;4.84e-07;73!CL:0000349;7.33e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.52e-17,76;CL:1000306,3.71e-13,4;CL:0002547,3.71e-13,4;CL:0000136,9.63e-13,15;CL:0002334,5.18e-12,12;CL:0000134,1.81e-11,354;CL:0002320,5.10e-11,361;CL:0000048,8.33e-11,427;CL:0000723,1.76e-10,433;CL:0002615,2.05e-10,3;CL:0002579,4.38e-10,3;CL:0000034,4.63e-10,441;CL:0002620,1.74e-09,23;CL:0000219,1.93e-09,386;CL:0000153,3.36e-09,9;CL:0000447,3.36e-09,9;CL:0002617,1.67e-07,2;CL:0000349,6.12e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.91e-10;5!DOID:450;6.91e-10;5!DOID:66;6.91e-10;5!DOID:423;6.91e-10;5!DOID:0080000;6.91e-10;5!DOID:11722;6.91e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.19e-10,5;DOID:450,4.19e-10,5;DOID:66,4.19e-10,5;DOID:423,4.19e-10,5;DOID:0080000,4.19e-10,5;DOID:11722,4.19e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0004923!1.87e-11!57;UBERON:0002199!3.01e-11!45;UBERON:0002416!3.01e-11!45;UBERON:0005631!5.73e-11!14;UBERON:0000158!5.73e-11!14;UBERON:0000914!1.23e-10!83;UBERON:0002329!1.23e-10!83;UBERON:0003077!1.23e-10!83;UBERON:0003059!1.23e-10!83;UBERON:0007282!1.23e-10!83;UBERON:0009618!1.23e-10!83;UBERON:0007285!1.23e-10!83;UBERON:0004290!4.44e-10!70;UBERON:0003102!7.66e-10!95;UBERON:0001134!1.18e-08!61;UBERON:0002036!1.18e-08!61;UBERON:0003082!1.18e-08!61;UBERON:0002385!1.31e-08!63;UBERON:0001015!1.31e-08!63;UBERON:0000383!1.31e-08!63;UBERON:0002097!1.79e-08!40;UBERON:0000486!1.85e-08!82;UBERON:0004872!4.15e-08!84;UBERON:0002384!1.11e-07!375;UBERON:0000478!1.98e-07!24;UBERON:0003688!2.57e-07!6;UBERON:0002358!2.57e-07!6;UBERON:0003684!2.57e-07!6;UBERON:0001178!2.57e-07!6;UBERON:0004871!4.49e-07!8;UBERON:0001013!4.51e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.85e-22;9!UBERON:0000042;2.85e-22;9!UBERON:0003688;8.15e-19;6!UBERON:0002358;8.15e-19;6!UBERON:0003684;8.15e-19;6!UBERON:0001178;8.15e-19;6!UBERON:0004797;2.71e-13;4!UBERON:0000415;2.71e-13;4!UBERON:0007240;2.71e-13;4!UBERON:0005742;2.71e-13;4!UBERON:0005734;2.71e-13;4!UBERON:0004664;2.71e-13;4!UBERON:0004663;2.71e-13;4!UBERON:0004923;7.31e-08;55!UBERON:0005406;1.77e-07;2!UBERON:0002384;5.56e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.84e-19,6;UBERON:0002358,8.84e-19,6;UBERON:0003684,8.84e-19,6;UBERON:0001178,8.84e-19,6;UBERON:0004457,2.60e-16,12;UBERON:0000042,2.60e-16,12;UBERON:0004923,1.07e-15,66;UBERON:0000415,3.71e-13,4;UBERON:0007240,3.71e-13,4;UBERON:0005742,3.71e-13,4;UBERON:0005734,3.71e-13,4;UBERON:0004664,3.71e-13,4;UBERON:0004663,3.71e-13,4;UBERON:0002384,6.60e-12,371;UBERON:0004797,1.60e-07,7;UBERON:0005406,1.61e-07,2;UBERON:0005631,2.92e-07,14;UBERON:0000158,2.92e-07,14;UBERON:0002199,3.02e-07,46;UBERON:0002416,3.02e-07,46;UBERON:0003124,3.64e-07,7 | |||
|phase1_expression=1.63510541343501,2.78330681058278,2.11431606143957,2.00146596706261,1.78784437770915,3.48935409640147,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0.436882744260345,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,4.3372698286148,1.00267582127178,3.91085601194224,0,0.973269740605272,0.189069634328136,0.665188192387692,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,4.47274756525787,1.2663051166458,1.19168262731897,16.3496873826824,2.4826786753885,0,0,2.4666754841716,0.622422070799533,0.808264032418128,0,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0.597794722207204,0.23486899728753,0.161872944368132,0.421352420106746,0.204154171254893,0.245668634623536,0.619954687054593,1.18800285728205,1.7308685049499,0,0,0,0.250237039743928,0,0.438977620880838,1.22595118319608,0.600952235626387,0,1.97328599257748,1.06778694409284,0.211931901159562,1.80054657650641,1.33968288009971,3.09168648054755,0.930584281657949,1.18143432568886,0.779496041289589,2.77677151668526,0.460249493211497,1.61646056818812,2.13005755509969,0.705264687593482,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,1.92972281457866,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,1.86156681609409,1.04007436911366,0,0,0.266422179016099,0.285955987316295,1.62786481617433,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0.718874566474748,0,0,1.30303176000821,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0.623912584592421,1.96271887676878,0.630809660135739,0.468565659970853,0,0,0,0,0.184369168541703,0.260650843404249,0.783204629850962,0,0,0,0,0.303127571446259,1.66435439510497,1.5119514666484,2.72918588600655,0.61384789315225,2.80660094433074,1.79394808957981,1.02341449813341,3.37793234401576,1.48418066444991,0.308419387605311,1.06537035187876,0.492762936082855,0.519254429183621,0.581051892299796,0,0.200506470303285,0,0.574072240823034,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,9.64103579064957,0.386682873168488,0.770243085573222,0,0.275673144969061,0.429680979473094,0.580066775656914,0.340906509664404,0.712256285173899,0,0,0,0,0.464845549297286,8.49993336442728,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.143124886741991,0.744316738719335,0.316379424718726,0.571890581771475,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0.823611089208164,0.589062011728432,0,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.272999822815972,1.97967604735198,0,0.551365343546124,0.66343897524122,0,0,0,0,0.30982349809975,0.281695602532241,0,0.392996164052485,0,0,7.81098250601357,7.24448764511784,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.95497793895076,0.296964680832639,0.614321404198464,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0.108647371922008,1.27600463892768,0.457987967009312,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0.864221491201268,0.326587360109409,0,0.082092520749339,1.02232813071253,0,0,0,0.129282956361551,0,0,0,0,0.471612915298998,1.24271716604159,0.992332043623902,0,0,0,0,0.2506898940227,0,0.655745261419609,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0.934853239388898,2.21922344601045,0.189403005275089,1.76097531226803,0,0.457680136793847,1.66354016139563,0.621748802331122,0.73927574994817,0,0,0.776314784381297,0,0.53168342911599,0,0.150257608997218,1.14241563650639,0.406870733204662,2.18218391043071,0.429642228169954,0.464033759878494,0.796191777397232,1.20008329398946,1.71697852591396,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0.438568099157414,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,3.17408349321616,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,3.4324388592045,0,0,0.150420656698515,0,0,0,0,0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| ||
|short_description=p@chr15:48826377..48826399,- | |||
}} | }} |
Latest revision as of 02:09, 25 July 2015
Short description: | p@chr15:48826377..48826399, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:48826377..48826399, - |
Coexpression cluster: | C834_Fibroblast_Sertoli_chorionic_Smooth_Synoviocyte_Preadipocyte_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.52e-17 | 76 |
fibroblast of tunica adventitia of artery | 3.71e-13 | 4 |
fibroblast of the aortic adventitia | 3.71e-13 | 4 |
fat cell | 9.63e-13 | 15 |
preadipocyte | 5.18e-12 | 12 |
mesenchymal cell | 1.81e-11 | 354 |
connective tissue cell | 5.10e-11 | 361 |
multi fate stem cell | 8.33e-11 | 427 |
somatic stem cell | 1.76e-10 | 433 |
adipocyte of omentum tissue | 2.05e-10 | 3 |
omentum preadipocyte | 4.38e-10 | 3 |
stem cell | 4.63e-10 | 441 |
skin fibroblast | 1.74e-09 | 23 |
motile cell | 1.93e-09 | 386 |
GAG secreting cell | 3.36e-09 | 9 |
carbohydrate secreting cell | 3.36e-09 | 9 |
adipocyte of breast | 1.67e-07 | 2 |
extraembryonic cell | 6.12e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.84e-19 | 6 |
peritoneum | 8.84e-19 | 6 |
abdominal cavity | 8.84e-19 | 6 |
visceral peritoneum | 8.84e-19 | 6 |
cavity lining | 2.60e-16 | 12 |
serous membrane | 2.60e-16 | 12 |
organ component layer | 1.07e-15 | 66 |
artery wall | 3.71e-13 | 4 |
tunica adventitia of artery | 3.71e-13 | 4 |
adventitia | 3.71e-13 | 4 |
tunica adventitia of blood vessel | 3.71e-13 | 4 |
aorta tunica adventitia | 3.71e-13 | 4 |
aorta wall | 3.71e-13 | 4 |
connective tissue | 6.60e-12 | 371 |
blood vessel layer | 1.60e-07 | 7 |
perirenal fat | 1.61e-07 | 2 |
extraembryonic membrane | 2.92e-07 | 14 |
membranous layer | 2.92e-07 | 14 |
integument | 3.02e-07 | 46 |
integumental system | 3.02e-07 | 46 |
chorion | 3.64e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.19e-10 | 5 |
myotonic disease | 4.19e-10 | 5 |
muscle tissue disease | 4.19e-10 | 5 |
myopathy | 4.19e-10 | 5 |
muscular disease | 4.19e-10 | 5 |
myotonic dystrophy | 4.19e-10 | 5 |