FFCP PHASE1:Hg19::chr15:48702329..48702343,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:48702329..48702343,- | |||
|coexpression_cluster_id=C1208 | |||
|description=CAGE_peak_at_chr15:48702329..48702343,- | |description=CAGE_peak_at_chr15:48702329..48702343,- | ||
|id=chr15:48702329..48702343,- | |id=chr15:48702329..48702343,- | ||
|ontology_enrichment_celltype=CL:0000055!9.68e-14!180;CL:0000057!9.78e-13!75;CL:0002620!4.78e-10!23;CL:0002334!1.25e-07!12;CL:0000048!5.81e-07!430 | |ontology_enrichment_celltype=CL:0000055!9.68e-14!180;CL:0000057!9.78e-13!75;CL:0002620!4.78e-10!23;CL:0002334!1.25e-07!12;CL:0000048!5.81e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.29e-19;23!CL:0002580;2.37e-10;3!CL:0000511;2.20e-08;1!CL:0002625;2.20e-08;1!CL:0000216;2.20e-08;1!CL:0000057;1.07e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.78e-19,23;CL:0000057,2.79e-18,76;CL:0002580,3.47e-10,3;CL:0000511,1.71e-08,1;CL:0002625,1.71e-08,1;CL:0000216,1.71e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.20e-08;1!UBERON:0003852;2.20e-08;1 | |||
|ontology_enrichment_disease=DOID:17!5.89e-09!5;DOID:450!5.89e-09!5;DOID:66!5.89e-09!5;DOID:423!5.89e-09!5;DOID:0080000!5.89e-09!5;DOID:11722!5.89e-09!5 | |ontology_enrichment_disease=DOID:17!5.89e-09!5;DOID:450!5.89e-09!5;DOID:66!5.89e-09!5;DOID:423!5.89e-09!5;DOID:0080000!5.89e-09!5;DOID:11722!5.89e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.09e-13;5!DOID:450;1.09e-13;5!DOID:66;1.09e-13;5!DOID:423;1.09e-13;5!DOID:0080000;1.09e-13;5!DOID:11722;1.09e-13;5!DOID:2513;9.45e-09;1!DOID:3571;2.20e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.33e-13,5;DOID:450,1.33e-13,5;DOID:66,1.33e-13,5;DOID:423,1.33e-13,5;DOID:0080000,1.33e-13,5;DOID:11722,1.33e-13,5;DOID:2513,1.10e-08,1;DOID:3571,1.98e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004457!4.04e-08!12;UBERON:0000042!4.04e-08!12;UBERON:0002199!6.87e-07!45;UBERON:0002416!6.87e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;8.08e-11;46!UBERON:0002416;8.08e-11;46!UBERON:0002097;4.19e-10;41!UBERON:0003102;1.84e-08;50!UBERON:0001136;2.20e-08;1!UBERON:0001343;2.20e-08;1!UBERON:0005705;2.20e-08;1!UBERON:0008193;2.20e-08;1!UBERON:0010912;2.20e-08;1!UBERON:0002514;2.20e-08;1!UBERON:0003457;2.20e-08;1!UBERON:0008907;2.20e-08;1!UBERON:0008001;2.20e-08;1!UBERON:0007213;2.20e-08;1!UBERON:0009891;2.20e-08;1!UBERON:0007914;2.20e-08;1!UBERON:0004910;2.20e-08;1!UBERON:0007375;2.20e-08;1!UBERON:0003323;2.20e-08;1!UBERON:0010258;2.20e-08;1!UBERON:0005253;2.20e-08;1!UBERON:0007842;2.20e-08;1!UBERON:0004813;2.20e-08;1!UBERON:0002397;2.20e-08;1!UBERON:0003113;2.20e-08;1!UBERON:0003277;2.20e-08;1!UBERON:0001709;2.20e-08;1!UBERON:0002244;2.20e-08;1!UBERON:0005620;2.20e-08;1!UBERON:0010364;2.20e-08;1!UBERON:0004288;2.20e-08;1!UBERON:0004457;9.46e-08;9!UBERON:0000042;9.46e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,5.19e-14,46;UBERON:0002416,5.19e-14,46;UBERON:0002097,7.92e-13,41;UBERON:0001136,1.71e-08,1;UBERON:0001343,1.71e-08,1;UBERON:0004910,1.71e-08,1;UBERON:0005154,1.71e-08,1;UBERON:0005295,1.71e-08,1;UBERON:0004813,1.71e-08,1;UBERON:0005297,1.71e-08,1;UBERON:0005294,1.71e-08,1;UBERON:0010141,1.71e-08,1;UBERON:0005891,1.71e-08,1;UBERON:0005705,2.13e-08,1;UBERON:0008193,2.13e-08,1;UBERON:0010912,2.13e-08,1;UBERON:0002514,2.13e-08,1;UBERON:0003457,2.13e-08,1;UBERON:0008907,2.13e-08,1;UBERON:0008001,2.13e-08,1;UBERON:0007213,2.13e-08,1;UBERON:0009891,2.13e-08,1;UBERON:0007914,2.13e-08,1;UBERON:0009292,2.13e-08,1;UBERON:0003099,2.13e-08,1;UBERON:0007375,2.13e-08,1;UBERON:0003323,2.13e-08,1;UBERON:0010258,2.13e-08,1;UBERON:0007842,2.13e-08,1;UBERON:0009494,2.13e-08,1;UBERON:0010042,2.13e-08,1;UBERON:0010045,2.13e-08,1;UBERON:0010259,2.13e-08,1;UBERON:0010359,2.13e-08,1;UBERON:0009526,2.13e-08,1;UBERON:0002397,2.13e-08,1;UBERON:0003113,2.13e-08,1;UBERON:0003277,2.13e-08,1;UBERON:0001709,2.13e-08,1;UBERON:0004066,2.13e-08,1;UBERON:0002244,2.13e-08,1;UBERON:0005620,2.13e-08,1;UBERON:0004362,2.13e-08,1;UBERON:0010364,2.13e-08,1;UBERON:0010046,2.13e-08,1;UBERON:0005868,2.13e-08,1;UBERON:0007238,2.13e-08,1;UBERON:0004288,2.13e-08,1;UBERON:0004068,2.13e-08,1;UBERON:0010334,2.13e-08,1;UBERON:0003852,2.13e-08,1;UBERON:0010253,2.13e-08,1;UBERON:0003102,3.00e-08,99 | |||
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|short_description=p@chr15:48702329..48702343,- | |short_description=p@chr15:48702329..48702343,- | ||
}} | }} |
Latest revision as of 02:08, 25 July 2015
Short description: | p@chr15:48702329..48702343, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:48702329..48702343, - |
Coexpression cluster: | C1208_Chondrocyte_Preadipocyte_Fibroblast_umbilical_Smooth_skin_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.78e-19 | 23 |
fibroblast | 2.79e-18 | 76 |
preadipocyte of the breast | 3.47e-10 | 3 |
androgen binding protein secreting cell | 1.71e-08 | 1 |
seminiferous tubule epithelial cell | 1.71e-08 | 1 |
Sertoli cell | 1.71e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.33e-13 | 5 |
myotonic disease | 1.33e-13 | 5 |
muscle tissue disease | 1.33e-13 | 5 |
myopathy | 1.33e-13 | 5 |
muscular disease | 1.33e-13 | 5 |
myotonic dystrophy | 1.33e-13 | 5 |
basal cell carcinoma | 1.10e-08 | 1 |
liver cancer | 1.98e-08 | 1 |